data_3B0W
#
_model_server_result.job_id            MjmesRia7mRz3-OUFHETqw 
_model_server_result.datetime_utc      '2024-11-24 07:32:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3b0w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1}' 
#
_entry.id    3B0W 
#
_exptl.entry_id    3B0W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              780.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DIGOXIN 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3B0W 
_cell.length_a            98.716 
_cell.length_b            98.716 
_cell.length_c            129.176 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3B0W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C41 H64 O14' 
_chem_comp.formula_weight    780.938 
_chem_comp.id                DGX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DIGOXIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 DGX sing 83 n n 
C1 C10 DGX sing 84 n n 
C2 C3 DGX sing 85 n n 
C3 O3 DGX sing 86 n n 
C3 C4 DGX sing 87 n n 
O3 C1X DGX sing 88 n n 
C4 C5 DGX sing 89 n n 
C5 C6 DGX sing 90 n n 
C5 C10 DGX sing 91 n n 
C6 C7 DGX sing 92 n n 
C7 C8 DGX sing 93 n n 
C8 C9 DGX sing 94 n n 
C8 C14 DGX sing 95 n n 
C9 C10 DGX sing 96 n n 
C9 C11 DGX sing 97 n n 
C10 C19 DGX sing 98 n n 
C11 C12 DGX sing 99 n n 
C12 O12 DGX sing 100 n n 
C12 C13 DGX sing 101 n n 
C13 C14 DGX sing 102 n n 
C13 C17 DGX sing 103 n n 
C13 C18 DGX sing 104 n n 
C14 O14 DGX sing 105 n n 
C14 C15 DGX sing 106 n n 
C15 C16 DGX sing 107 n n 
C16 C17 DGX sing 108 n n 
C17 C20 DGX sing 109 n n 
C1X C2X DGX sing 110 n n 
C1X O5X DGX sing 111 n n 
C1Y C2Y DGX sing 112 n n 
C1Y O4X DGX sing 113 n n 
C1Y O5Y DGX sing 114 n n 
C1Z C2Z DGX sing 115 n n 
C1Z O4Y DGX sing 116 n n 
C1Z O5Z DGX sing 117 n n 
C20 C21 DGX sing 118 n n 
C20 C22 DGX doub 119 n n 
C21 O21 DGX sing 120 n n 
O21 C23 DGX sing 121 n n 
C22 C23 DGX sing 122 n n 
C23 O23 DGX doub 123 n n 
C2X C3X DGX sing 124 n n 
C2Y C3Y DGX sing 125 n n 
C2Z C3Z DGX sing 126 n n 
C3X O3X DGX sing 127 n n 
C3X C4X DGX sing 128 n n 
C3Y O3Y DGX sing 129 n n 
C3Y C4Y DGX sing 130 n n 
C3Z O3Z DGX sing 131 n n 
C3Z C4Z DGX sing 132 n n 
C4X O4X DGX sing 133 n n 
C4X C5X DGX sing 134 n n 
C4Y O4Y DGX sing 135 n n 
C4Y C5Y DGX sing 136 n n 
C4Z O4Z DGX sing 137 n n 
C4Z C5Z DGX sing 138 n n 
C5X O5X DGX sing 139 n n 
C5X C6X DGX sing 140 n n 
C5Y O5Y DGX sing 141 n n 
C5Y C6Y DGX sing 142 n n 
C5Z O5Z DGX sing 143 n n 
C5Z C6Z DGX sing 144 n n 
C1 H1 DGX sing 145 n n 
C1 H1A DGX sing 146 n n 
C2 H2 DGX sing 147 n n 
C2 H2A DGX sing 148 n n 
C3 H3 DGX sing 149 n n 
C4 H4 DGX sing 150 n n 
C4 H4A DGX sing 151 n n 
C5 H5 DGX sing 152 n n 
C6 H6 DGX sing 153 n n 
C6 H6A DGX sing 154 n n 
C7 H7 DGX sing 155 n n 
C7 H7A DGX sing 156 n n 
C8 H8 DGX sing 157 n n 
C9 H9 DGX sing 158 n n 
C11 H11 DGX sing 159 n n 
C11 H11A DGX sing 160 n n 
C12 H12 DGX sing 161 n n 
O12 HO12 DGX sing 162 n n 
O14 HO14 DGX sing 163 n n 
C15 H15 DGX sing 164 n n 
C15 H15A DGX sing 165 n n 
C16 H16 DGX sing 166 n n 
C16 H16A DGX sing 167 n n 
C17 H17 DGX sing 168 n n 
C18 H18 DGX sing 169 n n 
C18 H18A DGX sing 170 n n 
C18 H18B DGX sing 171 n n 
C19 H19 DGX sing 172 n n 
C19 H19A DGX sing 173 n n 
C19 H19B DGX sing 174 n n 
C1X H1X DGX sing 175 n n 
C1Y H1Y DGX sing 176 n n 
C1Z H1Z DGX sing 177 n n 
C21 H21 DGX sing 178 n n 
C21 H21A DGX sing 179 n n 
C22 H22 DGX sing 180 n n 
C2X H2X DGX sing 181 n n 
C2X H2XA DGX sing 182 n n 
C2Y H2Y DGX sing 183 n n 
C2Y H2YA DGX sing 184 n n 
C2Z H2Z DGX sing 185 n n 
C2Z H2ZA DGX sing 186 n n 
C3X H3X DGX sing 187 n n 
O3X HO3X DGX sing 188 n n 
C3Y H3Y DGX sing 189 n n 
O3Y HO3Y DGX sing 190 n n 
C3Z H3Z DGX sing 191 n n 
O3Z HO3Z DGX sing 192 n n 
C4X H4X DGX sing 193 n n 
C4Y H4Y DGX sing 194 n n 
C4Z H4Z DGX sing 195 n n 
O4Z HO4Z DGX sing 196 n n 
C5X H5X DGX sing 197 n n 
C5Y H5Y DGX sing 198 n n 
C5Z H5Z DGX sing 199 n n 
C6X H6X DGX sing 200 n n 
C6X H6XA DGX sing 201 n n 
C6X H6XB DGX sing 202 n n 
C6Y H6Y DGX sing 203 n n 
C6Y H6YA DGX sing 204 n n 
C6Y H6YB DGX sing 205 n n 
C6Z H6Z DGX sing 206 n n 
C6Z H6ZA DGX sing 207 n n 
C6Z H6ZB DGX sing 208 n n 
#
_atom_sites.entry_id                     3B0W 
_atom_sites.fract_transf_matrix[1][1]    0.01013 
_atom_sites.fract_transf_matrix[1][2]    0.005849 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011697 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007741 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 DGX A 1 1 1 DGX DGX . 
D 2 DGX B 1 1 1 DGX DGX . 
E 3 HOH A 1 3 3 HOH HOH . 
E 3 HOH A 2 4 4 HOH HOH . 
E 3 HOH A 3 9 9 HOH HOH . 
E 3 HOH A 4 11 11 HOH HOH . 
E 3 HOH A 5 12 12 HOH HOH . 
E 3 HOH A 6 13 13 HOH HOH . 
E 3 HOH A 7 15 15 HOH HOH . 
E 3 HOH A 8 17 17 HOH HOH . 
E 3 HOH A 9 18 18 HOH HOH . 
E 3 HOH A 10 19 19 HOH HOH . 
E 3 HOH A 11 20 20 HOH HOH . 
E 3 HOH A 12 23 23 HOH HOH . 
E 3 HOH A 13 24 24 HOH HOH . 
E 3 HOH A 14 30 30 HOH HOH . 
E 3 HOH A 15 31 31 HOH HOH . 
E 3 HOH A 16 32 32 HOH HOH . 
E 3 HOH A 17 33 33 HOH HOH . 
E 3 HOH A 18 34 34 HOH HOH . 
E 3 HOH A 19 37 37 HOH HOH . 
E 3 HOH A 20 41 41 HOH HOH . 
E 3 HOH A 21 42 42 HOH HOH . 
E 3 HOH A 22 45 45 HOH HOH . 
E 3 HOH A 23 48 48 HOH HOH . 
E 3 HOH A 24 50 50 HOH HOH . 
E 3 HOH A 25 51 51 HOH HOH . 
E 3 HOH A 26 52 52 HOH HOH . 
E 3 HOH A 27 53 53 HOH HOH . 
E 3 HOH A 28 54 54 HOH HOH . 
E 3 HOH A 29 55 55 HOH HOH . 
E 3 HOH A 30 57 57 HOH HOH . 
E 3 HOH A 31 58 58 HOH HOH . 
E 3 HOH A 32 61 61 HOH HOH . 
E 3 HOH A 33 62 62 HOH HOH . 
E 3 HOH A 34 65 65 HOH HOH . 
E 3 HOH A 35 67 67 HOH HOH . 
E 3 HOH A 36 69 69 HOH HOH . 
E 3 HOH A 37 70 70 HOH HOH . 
E 3 HOH A 38 71 71 HOH HOH . 
E 3 HOH A 39 508 1 HOH HOH . 
F 3 HOH B 1 2 2 HOH HOH . 
F 3 HOH B 2 5 5 HOH HOH . 
F 3 HOH B 3 6 6 HOH HOH . 
F 3 HOH B 4 7 7 HOH HOH . 
F 3 HOH B 5 8 8 HOH HOH . 
F 3 HOH B 6 10 10 HOH HOH . 
F 3 HOH B 7 14 14 HOH HOH . 
F 3 HOH B 8 16 16 HOH HOH . 
F 3 HOH B 9 21 21 HOH HOH . 
F 3 HOH B 10 22 22 HOH HOH . 
F 3 HOH B 11 25 25 HOH HOH . 
F 3 HOH B 12 26 26 HOH HOH . 
F 3 HOH B 13 27 27 HOH HOH . 
F 3 HOH B 14 28 28 HOH HOH . 
F 3 HOH B 15 29 29 HOH HOH . 
F 3 HOH B 16 35 35 HOH HOH . 
F 3 HOH B 17 36 36 HOH HOH . 
F 3 HOH B 18 38 38 HOH HOH . 
F 3 HOH B 19 39 39 HOH HOH . 
F 3 HOH B 20 40 40 HOH HOH . 
F 3 HOH B 21 43 43 HOH HOH . 
F 3 HOH B 22 44 44 HOH HOH . 
F 3 HOH B 23 46 46 HOH HOH . 
F 3 HOH B 24 47 47 HOH HOH . 
F 3 HOH B 25 49 49 HOH HOH . 
F 3 HOH B 26 56 56 HOH HOH . 
F 3 HOH B 27 59 59 HOH HOH . 
F 3 HOH B 28 60 60 HOH HOH . 
F 3 HOH B 29 63 63 HOH HOH . 
F 3 HOH B 30 64 64 HOH HOH . 
F 3 HOH B 31 66 66 HOH HOH . 
F 3 HOH B 32 68 68 HOH HOH . 
F 3 HOH B 33 72 72 HOH HOH . 
F 3 HOH B 34 73 73 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DGX . . . D 2 7.851 30.544 -27.445 1 45.44 ? C1 DGX 1 B 1 
HETATM 2 C C2 DGX . . . D 2 8.212 30.868 -25.974 1 46.89 ? C2 DGX 1 B 1 
HETATM 3 C C3 DGX . . . D 2 8.802 32.291 -25.849 1 47.29 ? C3 DGX 1 B 1 
HETATM 4 O O3 DGX . . . D 2 7.796 33.243 -26.198 1 48.47 ? O3 DGX 1 B 1 
HETATM 5 C C4 DGX . . . D 2 10.025 32.465 -26.786 1 44.71 ? C4 DGX 1 B 1 
HETATM 6 C C5 DGX . . . D 2 9.644 32.17 -28.254 1 45.83 ? C5 DGX 1 B 1 
HETATM 7 C C6 DGX . . . D 2 10.875 32.366 -29.175 1 43.3 ? C6 DGX 1 B 1 
HETATM 8 C C7 DGX . . . D 2 11.899 31.221 -29.043 1 42.25 ? C7 DGX 1 B 1 
HETATM 9 C C8 DGX . . . D 2 11.288 29.798 -29.142 1 43.16 ? C8 DGX 1 B 1 
HETATM 10 C C9 DGX . . . D 2 10.065 29.632 -28.221 1 44.93 ? C9 DGX 1 B 1 
HETATM 11 C C10 DGX . . . D 2 9.013 30.753 -28.44 1 44.43 ? C10 DGX 1 B 1 
HETATM 12 C C11 DGX . . . D 2 9.468 28.21 -28.389 1 45.04 ? C11 DGX 1 B 1 
HETATM 13 C C12 DGX . . . D 2 10.52 27.153 -28.028 1 45.77 ? C12 DGX 1 B 1 
HETATM 14 O O12 DGX . . . D 2 9.898 25.868 -28.118 1 47.07 ? O12 DGX 1 B 1 
HETATM 15 C C13 DGX . . . D 2 11.769 27.24 -28.95 1 46.41 ? C13 DGX 1 B 1 
HETATM 16 C C14 DGX . . . D 2 12.332 28.693 -28.946 1 45.17 ? C14 DGX 1 B 1 
HETATM 17 O O14 DGX . . . D 2 13.328 28.838 -29.98 1 44.12 ? O14 DGX 1 B 1 
HETATM 18 C C15 DGX . . . D 2 13.103 28.771 -27.608 1 44.63 ? C15 DGX 1 B 1 
HETATM 19 C C16 DGX . . . D 2 13.868 27.429 -27.602 1 46.84 ? C16 DGX 1 B 1 
HETATM 20 C C17 DGX . . . D 2 12.908 26.408 -28.267 1 48.79 ? C17 DGX 1 B 1 
HETATM 21 C C18 DGX . . . D 2 11.457 26.76 -30.375 1 43.17 ? C18 DGX 1 B 1 
HETATM 22 C C19 DGX . . . D 2 8.421 30.698 -29.867 1 44.66 ? C19 DGX 1 B 1 
HETATM 23 C C1X DGX . . . D 2 8.014 34.557 -25.716 1 52.13 ? C1X DGX 1 B 1 
HETATM 24 C C1Y DGX . . . D 2 5.732 38.539 -23.326 1 71.71 ? C1Y DGX 1 B 1 
HETATM 25 C C1Z DGX . . . D 2 2.91 42.86 -23.835 1 79.03 ? C1Z DGX 1 B 1 
HETATM 26 C C20 DGX . . . D 2 13.734 25.491 -29.168 1 52.85 ? C20 DGX 1 B 1 
HETATM 27 C C21 DGX . . . D 2 13.69 23.978 -29.194 1 55.36 ? C21 DGX 1 B 1 
HETATM 28 O O21 DGX . . . D 2 14.691 23.534 -30.169 1 58.16 ? O21 DGX 1 B 1 
HETATM 29 C C22 DGX . . . D 2 14.655 25.844 -30.067 1 53.51 ? C22 DGX 1 B 1 
HETATM 30 C C23 DGX . . . D 2 15.244 24.652 -30.688 1 56.48 ? C23 DGX 1 B 1 
HETATM 31 O O23 DGX . . . D 2 16.132 24.676 -31.518 1 57.63 ? O23 DGX 1 B 1 
HETATM 32 C C2X DGX . . . D 2 6.793 35.371 -26.146 1 56.19 ? C2X DGX 1 B 1 
HETATM 33 C C2Y DGX . . . D 2 5.061 38.755 -21.967 1 74.22 ? C2Y DGX 1 B 1 
HETATM 34 C C2Z DGX . . . D 2 1.875 43.155 -24.936 1 79.86 ? C2Z DGX 1 B 1 
HETATM 35 C C3X DGX . . . D 2 6.681 36.688 -25.36 1 59.88 ? C3X DGX 1 B 1 
HETATM 36 O O3X DGX . . . D 2 7.713 37.591 -25.767 1 61.24 ? O3X DGX 1 B 1 
HETATM 37 C C3Y DGX . . . D 2 3.862 39.705 -22.148 1 75.76 ? C3Y DGX 1 B 1 
HETATM 38 O O3Y DGX . . . D 2 2.775 38.934 -22.674 1 76.63 ? O3Y DGX 1 B 1 
HETATM 39 C C3Z DGX . . . D 2 1.842 44.668 -25.228 1 80.49 ? C3Z DGX 1 B 1 
HETATM 40 O O3Z DGX . . . D 2 3.009 45.071 -25.96 1 80.46 ? O3Z DGX 1 B 1 
HETATM 41 C C4X DGX . . . D 2 6.811 36.46 -23.847 1 61.64 ? C4X DGX 1 B 1 
HETATM 42 O O4X DGX . . . D 2 6.898 37.74 -23.207 1 68.25 ? O4X DGX 1 B 1 
HETATM 43 C C4Y DGX . . . D 2 4.166 40.939 -23.043 1 76.16 ? C4Y DGX 1 B 1 
HETATM 44 O O4Y DGX . . . D 2 2.922 41.466 -23.527 1 78.21 ? O4Y DGX 1 B 1 
HETATM 45 C C4Z DGX . . . D 2 1.724 45.495 -23.926 1 80.2 ? C4Z DGX 1 B 1 
HETATM 46 O O4Z DGX . . . D 2 1.975 46.865 -24.253 1 79.81 ? O4Z DGX 1 B 1 
HETATM 47 C C5X DGX . . . D 2 8.112 35.706 -23.548 1 58.71 ? C5X DGX 1 B 1 
HETATM 48 O O5X DGX . . . D 2 8.147 34.485 -24.293 1 54.88 ? O5X DGX 1 B 1 
HETATM 49 C C5Y DGX . . . D 2 5.073 40.611 -24.249 1 75.44 ? C5Y DGX 1 B 1 
HETATM 50 O O5Y DGX . . . D 2 6.162 39.791 -23.829 1 73.91 ? O5Y DGX 1 B 1 
HETATM 51 C C5Z DGX . . . D 2 2.674 45.021 -22.796 1 80.32 ? C5Z DGX 1 B 1 
HETATM 52 O O5Z DGX . . . D 2 2.623 43.596 -22.645 1 79.84 ? O5Z DGX 1 B 1 
HETATM 53 C C6X DGX . . . D 2 8.168 35.392 -22.056 1 58.07 ? C6X DGX 1 B 1 
HETATM 54 C C6Y DGX . . . D 2 5.654 41.882 -24.884 1 75.16 ? C6Y DGX 1 B 1 
HETATM 55 C C6Z DGX . . . D 2 2.287 45.635 -21.441 1 79.95 ? C6Z DGX 1 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           55 
#