data_3B1X # _model_server_result.job_id NP1RPI1p87xX3y3F1p66ug _model_server_result.datetime_utc '2024-12-02 14:30:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b1x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 3B1X # _exptl.entry_id 3B1X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3B1X _cell.length_a 48.7 _cell.length_b 74.4 _cell.length_c 156.1 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B1X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 17 A THR 15 1_555 D MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc2 A OG1 THR 37 A THR 35 1_555 D MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc3 G O HOH . A HOH 275 1_555 D MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc4 G O HOH . A HOH 276 1_555 D MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc5 C O2B GNP . A GNP 300 1_555 D MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc6 C O3G GNP . A GNP 300 1_555 D MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc7 B OG1 THR 17 B THR 15 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc8 B OG1 THR 37 B THR 35 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc9 H O HOH . B HOH 273 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc10 H O HOH . B HOH 274 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc11 E O2B GNP . B GNP 300 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc12 E O3G GNP . B GNP 300 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3B1X _atom_sites.fract_transf_matrix[1][1] 0.020549 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013447 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006408 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GNP A 1 300 300 GNP GNP . D 3 MG A 1 301 301 MG MG . E 2 GNP B 1 300 300 GNP GNP . F 3 MG B 1 301 301 MG MG . G 4 HOH A 1 271 1 HOH HOH . G 4 HOH A 2 272 2 HOH HOH . G 4 HOH A 3 273 3 HOH HOH . G 4 HOH A 4 274 4 HOH HOH . G 4 HOH A 5 275 5 HOH HOH . G 4 HOH A 6 276 6 HOH HOH . G 4 HOH A 7 277 10 HOH HOH . G 4 HOH A 8 278 11 HOH HOH . G 4 HOH A 9 279 12 HOH HOH . G 4 HOH A 10 280 13 HOH HOH . G 4 HOH A 11 281 14 HOH HOH . G 4 HOH A 12 282 18 HOH HOH . G 4 HOH A 13 283 19 HOH HOH . G 4 HOH A 14 284 22 HOH HOH . G 4 HOH A 15 285 23 HOH HOH . G 4 HOH A 16 286 24 HOH HOH . G 4 HOH A 17 287 25 HOH HOH . G 4 HOH A 18 288 26 HOH HOH . G 4 HOH A 19 289 27 HOH HOH . G 4 HOH A 20 290 29 HOH HOH . G 4 HOH A 21 291 30 HOH HOH . G 4 HOH A 22 292 31 HOH HOH . G 4 HOH A 23 293 33 HOH HOH . G 4 HOH A 24 294 34 HOH HOH . G 4 HOH A 25 295 36 HOH HOH . G 4 HOH A 26 296 37 HOH HOH . G 4 HOH A 27 297 50 HOH HOH . G 4 HOH A 28 298 51 HOH HOH . H 4 HOH B 1 271 7 HOH HOH . H 4 HOH B 2 272 8 HOH HOH . H 4 HOH B 3 273 9 HOH HOH . H 4 HOH B 4 274 15 HOH HOH . H 4 HOH B 5 275 16 HOH HOH . H 4 HOH B 6 276 17 HOH HOH . H 4 HOH B 7 277 20 HOH HOH . H 4 HOH B 8 278 21 HOH HOH . H 4 HOH B 9 279 28 HOH HOH . H 4 HOH B 10 280 32 HOH HOH . H 4 HOH B 11 281 35 HOH HOH . H 4 HOH B 12 282 38 HOH HOH . H 4 HOH B 13 283 39 HOH HOH . H 4 HOH B 14 284 40 HOH HOH . H 4 HOH B 15 285 41 HOH HOH . H 4 HOH B 16 286 42 HOH HOH . H 4 HOH B 17 287 43 HOH HOH . H 4 HOH B 18 288 44 HOH HOH . H 4 HOH B 19 289 45 HOH HOH . H 4 HOH B 20 290 46 HOH HOH . H 4 HOH B 21 291 47 HOH HOH . H 4 HOH B 22 292 48 HOH HOH . H 4 HOH B 23 293 49 HOH HOH . H 4 HOH B 24 294 52 HOH HOH . H 4 HOH B 25 295 53 HOH HOH . H 4 HOH B 26 296 54 HOH HOH . H 4 HOH B 27 297 55 HOH HOH . H 4 HOH B 28 298 56 HOH HOH . H 4 HOH B 29 299 57 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -34.161 _atom_site.Cartn_y 13.406 _atom_site.Cartn_z -50.276 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 781 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 1 #