data_3B2F # _model_server_result.job_id vVcyxqljEvihbQX-XN3xCA _model_server_result.datetime_utc '2024-11-05 00:32:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b2f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":99}' # _entry.id 3B2F # _exptl.entry_id 3B2F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.82 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3B2F _cell.length_a 39.485 _cell.length_b 62.939 _cell.length_c 65.06 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B2F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 39 A CYS 39 1_555 C FE2 FES . A FES 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc2 A SG CYS 44 A CYS 44 1_555 C FE2 FES . A FES 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc3 A SG CYS 47 A CYS 47 1_555 C FE1 FES . A FES 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc4 A SG CYS 77 A CYS 77 1_555 C FE1 FES . A FES 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc5 B SG CYS 39 B CYS 39 1_555 D FE2 FES . B FES 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc6 B SG CYS 44 B CYS 44 1_555 D FE2 FES . B FES 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc7 B SG CYS 47 B CYS 47 1_555 D FE1 FES . B FES 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc8 B SG CYS 77 B CYS 77 1_555 D FE1 FES . B FES 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 83 n n FE1 S2 FES sing 84 n n FE2 S1 FES sing 85 n n FE2 S2 FES sing 86 n n # _atom_sites.entry_id 3B2F _atom_sites.fract_transf_matrix[1][1] 0.025326 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015888 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01537 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FES A 1 99 99 FES FES . D 2 FES B 1 99 99 FES FES . E 3 HOH A 1 100 100 HOH HOH . E 3 HOH A 2 101 3 HOH HOH . E 3 HOH A 3 102 7 HOH HOH . E 3 HOH A 4 103 12 HOH HOH . E 3 HOH A 5 104 14 HOH HOH . E 3 HOH A 6 105 105 HOH HOH . E 3 HOH A 7 106 106 HOH HOH . E 3 HOH A 8 107 17 HOH HOH . E 3 HOH A 9 108 18 HOH HOH . E 3 HOH A 10 109 22 HOH HOH . E 3 HOH A 11 110 110 HOH HOH . E 3 HOH A 12 111 111 HOH HOH . E 3 HOH A 13 112 112 HOH HOH . E 3 HOH A 14 113 24 HOH HOH . E 3 HOH A 15 114 114 HOH HOH . E 3 HOH A 16 115 115 HOH HOH . E 3 HOH A 17 116 25 HOH HOH . E 3 HOH A 18 117 117 HOH HOH . E 3 HOH A 19 118 28 HOH HOH . E 3 HOH A 20 119 119 HOH HOH . E 3 HOH A 21 120 120 HOH HOH . E 3 HOH A 22 121 29 HOH HOH . E 3 HOH A 23 122 30 HOH HOH . E 3 HOH A 24 123 33 HOH HOH . E 3 HOH A 25 124 39 HOH HOH . E 3 HOH A 26 125 125 HOH HOH . E 3 HOH A 27 126 40 HOH HOH . E 3 HOH A 28 127 127 HOH HOH . E 3 HOH A 29 128 41 HOH HOH . E 3 HOH A 30 129 43 HOH HOH . E 3 HOH A 31 130 47 HOH HOH . E 3 HOH A 32 131 131 HOH HOH . E 3 HOH A 33 132 50 HOH HOH . E 3 HOH A 34 133 51 HOH HOH . E 3 HOH A 35 134 134 HOH HOH . E 3 HOH A 36 135 54 HOH HOH . E 3 HOH A 37 136 136 HOH HOH . E 3 HOH A 38 137 137 HOH HOH . E 3 HOH A 39 138 55 HOH HOH . E 3 HOH A 40 139 59 HOH HOH . E 3 HOH A 41 140 140 HOH HOH . E 3 HOH A 42 141 61 HOH HOH . E 3 HOH A 43 142 142 HOH HOH . E 3 HOH A 44 143 143 HOH HOH . E 3 HOH A 45 144 144 HOH HOH . E 3 HOH A 46 145 69 HOH HOH . E 3 HOH A 47 146 72 HOH HOH . E 3 HOH A 48 147 74 HOH HOH . E 3 HOH A 49 148 77 HOH HOH . E 3 HOH A 50 149 149 HOH HOH . E 3 HOH A 51 150 80 HOH HOH . E 3 HOH A 52 151 81 HOH HOH . E 3 HOH A 53 152 152 HOH HOH . E 3 HOH A 54 153 153 HOH HOH . E 3 HOH A 55 154 82 HOH HOH . E 3 HOH A 56 155 83 HOH HOH . E 3 HOH A 57 156 84 HOH HOH . E 3 HOH A 58 157 86 HOH HOH . E 3 HOH A 59 158 158 HOH HOH . E 3 HOH A 60 161 161 HOH HOH . E 3 HOH A 61 165 165 HOH HOH . E 3 HOH A 62 166 166 HOH HOH . E 3 HOH A 63 167 167 HOH HOH . E 3 HOH A 64 168 168 HOH HOH . F 3 HOH B 1 100 1 HOH HOH . F 3 HOH B 2 101 2 HOH HOH . F 3 HOH B 3 102 102 HOH HOH . F 3 HOH B 4 103 103 HOH HOH . F 3 HOH B 5 104 104 HOH HOH . F 3 HOH B 6 105 4 HOH HOH . F 3 HOH B 7 106 6 HOH HOH . F 3 HOH B 8 107 107 HOH HOH . F 3 HOH B 9 108 108 HOH HOH . F 3 HOH B 10 109 109 HOH HOH . F 3 HOH B 11 110 8 HOH HOH . F 3 HOH B 12 111 9 HOH HOH . F 3 HOH B 13 112 11 HOH HOH . F 3 HOH B 14 113 113 HOH HOH . F 3 HOH B 15 114 15 HOH HOH . F 3 HOH B 16 115 16 HOH HOH . F 3 HOH B 17 116 116 HOH HOH . F 3 HOH B 18 117 19 HOH HOH . F 3 HOH B 19 118 118 HOH HOH . F 3 HOH B 20 119 23 HOH HOH . F 3 HOH B 21 120 26 HOH HOH . F 3 HOH B 22 121 121 HOH HOH . F 3 HOH B 23 122 122 HOH HOH . F 3 HOH B 24 123 123 HOH HOH . F 3 HOH B 25 124 124 HOH HOH . F 3 HOH B 26 125 27 HOH HOH . F 3 HOH B 27 126 126 HOH HOH . F 3 HOH B 28 127 31 HOH HOH . F 3 HOH B 29 128 128 HOH HOH . F 3 HOH B 30 129 129 HOH HOH . F 3 HOH B 31 130 130 HOH HOH . F 3 HOH B 32 131 35 HOH HOH . F 3 HOH B 33 132 132 HOH HOH . F 3 HOH B 34 133 133 HOH HOH . F 3 HOH B 35 134 37 HOH HOH . F 3 HOH B 36 135 135 HOH HOH . F 3 HOH B 37 136 38 HOH HOH . F 3 HOH B 38 137 42 HOH HOH . F 3 HOH B 39 138 44 HOH HOH . F 3 HOH B 40 139 139 HOH HOH . F 3 HOH B 41 140 45 HOH HOH . F 3 HOH B 42 141 141 HOH HOH . F 3 HOH B 43 142 46 HOH HOH . F 3 HOH B 44 143 48 HOH HOH . F 3 HOH B 45 144 52 HOH HOH . F 3 HOH B 46 145 145 HOH HOH . F 3 HOH B 47 146 57 HOH HOH . F 3 HOH B 48 147 147 HOH HOH . F 3 HOH B 49 148 148 HOH HOH . F 3 HOH B 50 149 62 HOH HOH . F 3 HOH B 51 150 150 HOH HOH . F 3 HOH B 52 151 151 HOH HOH . F 3 HOH B 53 152 63 HOH HOH . F 3 HOH B 54 153 64 HOH HOH . F 3 HOH B 55 154 65 HOH HOH . F 3 HOH B 56 155 67 HOH HOH . F 3 HOH B 57 156 68 HOH HOH . F 3 HOH B 58 157 75 HOH HOH . F 3 HOH B 59 158 76 HOH HOH . F 3 HOH B 60 159 79 HOH HOH . F 3 HOH B 61 160 88 HOH HOH . F 3 HOH B 62 161 93 HOH HOH . F 3 HOH B 63 162 94 HOH HOH . F 3 HOH B 64 163 163 HOH HOH . F 3 HOH B 65 164 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . D 2 24.165 -6.067 -6.006 1 5.89 ? FE1 FES 99 B 1 HETATM 2 FE FE2 FES . . . D 2 23.015 -8.385 -6.939 1 7.46 ? FE2 FES 99 B 1 HETATM 3 S S1 FES . . . D 2 24.489 -8.082 -5.353 1 5.47 ? S1 FES 99 B 1 HETATM 4 S S2 FES . . . D 2 22.836 -6.318 -7.708 1 5.93 ? S2 FES 99 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #