data_3B36 # _model_server_result.job_id zmL--6BHHdLSldcObzjF5w _model_server_result.datetime_utc '2024-11-30 07:08:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b36 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":196}' # _entry.id 3B36 # _exptl.entry_id 3B36 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3B36 _cell.length_a 74.818 _cell.length_b 74.818 _cell.length_c 75.264 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B36 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 25.088 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3B36 _atom_sites.fract_transf_matrix[1][1] 0.013366 _atom_sites.fract_transf_matrix[1][2] 0.007717 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015433 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 190 1 CL CL . C 3 EDO A 1 191 2 EDO EDO . D 3 EDO A 1 192 3 EDO EDO . E 3 EDO A 1 193 4 EDO EDO . F 3 EDO A 1 194 5 EDO EDO . G 3 EDO A 1 195 6 EDO EDO . H 3 EDO A 1 196 7 EDO EDO . I 3 EDO A 1 197 8 EDO EDO . J 3 EDO A 1 198 9 EDO EDO . K 4 HOH A 1 199 1 HOH HOH . K 4 HOH A 2 200 2 HOH HOH . K 4 HOH A 3 201 3 HOH HOH . K 4 HOH A 4 202 4 HOH HOH . K 4 HOH A 5 203 5 HOH HOH . K 4 HOH A 6 204 6 HOH HOH . K 4 HOH A 7 205 7 HOH HOH . K 4 HOH A 8 206 8 HOH HOH . K 4 HOH A 9 207 9 HOH HOH . K 4 HOH A 10 208 10 HOH HOH . K 4 HOH A 11 209 11 HOH HOH . K 4 HOH A 12 210 12 HOH HOH . K 4 HOH A 13 211 13 HOH HOH . K 4 HOH A 14 212 14 HOH HOH . K 4 HOH A 15 213 15 HOH HOH . K 4 HOH A 16 214 16 HOH HOH . K 4 HOH A 17 215 17 HOH HOH . K 4 HOH A 18 216 18 HOH HOH . K 4 HOH A 19 217 19 HOH HOH . K 4 HOH A 20 218 20 HOH HOH . K 4 HOH A 21 219 21 HOH HOH . K 4 HOH A 22 220 22 HOH HOH . K 4 HOH A 23 221 23 HOH HOH . K 4 HOH A 24 222 24 HOH HOH . K 4 HOH A 25 223 25 HOH HOH . K 4 HOH A 26 224 26 HOH HOH . K 4 HOH A 27 225 27 HOH HOH . K 4 HOH A 28 226 28 HOH HOH . K 4 HOH A 29 227 29 HOH HOH . K 4 HOH A 30 228 30 HOH HOH . K 4 HOH A 31 229 31 HOH HOH . K 4 HOH A 32 230 32 HOH HOH . K 4 HOH A 33 231 33 HOH HOH . K 4 HOH A 34 232 34 HOH HOH . K 4 HOH A 35 233 35 HOH HOH . K 4 HOH A 36 234 36 HOH HOH . K 4 HOH A 37 235 37 HOH HOH . K 4 HOH A 38 236 38 HOH HOH . K 4 HOH A 39 237 39 HOH HOH . K 4 HOH A 40 238 40 HOH HOH . K 4 HOH A 41 239 41 HOH HOH . K 4 HOH A 42 240 42 HOH HOH . K 4 HOH A 43 241 43 HOH HOH . K 4 HOH A 44 242 44 HOH HOH . K 4 HOH A 45 243 45 HOH HOH . K 4 HOH A 46 244 46 HOH HOH . K 4 HOH A 47 245 47 HOH HOH . K 4 HOH A 48 246 48 HOH HOH . K 4 HOH A 49 247 49 HOH HOH . K 4 HOH A 50 248 50 HOH HOH . K 4 HOH A 51 249 51 HOH HOH . K 4 HOH A 52 250 52 HOH HOH . K 4 HOH A 53 251 53 HOH HOH . K 4 HOH A 54 252 54 HOH HOH . K 4 HOH A 55 253 55 HOH HOH . K 4 HOH A 56 254 56 HOH HOH . K 4 HOH A 57 255 57 HOH HOH . K 4 HOH A 58 256 58 HOH HOH . K 4 HOH A 59 257 59 HOH HOH . K 4 HOH A 60 258 60 HOH HOH . K 4 HOH A 61 259 61 HOH HOH . K 4 HOH A 62 260 62 HOH HOH . K 4 HOH A 63 261 63 HOH HOH . K 4 HOH A 64 262 64 HOH HOH . K 4 HOH A 65 263 65 HOH HOH . K 4 HOH A 66 264 66 HOH HOH . K 4 HOH A 67 265 67 HOH HOH . K 4 HOH A 68 266 68 HOH HOH . K 4 HOH A 69 267 69 HOH HOH . K 4 HOH A 70 268 70 HOH HOH . K 4 HOH A 71 269 71 HOH HOH . K 4 HOH A 72 270 72 HOH HOH . K 4 HOH A 73 271 73 HOH HOH . K 4 HOH A 74 272 74 HOH HOH . K 4 HOH A 75 273 75 HOH HOH . K 4 HOH A 76 274 76 HOH HOH . K 4 HOH A 77 275 77 HOH HOH . K 4 HOH A 78 276 78 HOH HOH . K 4 HOH A 79 277 79 HOH HOH . K 4 HOH A 80 278 80 HOH HOH . K 4 HOH A 81 279 81 HOH HOH . K 4 HOH A 82 280 82 HOH HOH . K 4 HOH A 83 281 83 HOH HOH . K 4 HOH A 84 282 84 HOH HOH . K 4 HOH A 85 283 85 HOH HOH . K 4 HOH A 86 284 86 HOH HOH . K 4 HOH A 87 285 87 HOH HOH . K 4 HOH A 88 286 88 HOH HOH . K 4 HOH A 89 287 89 HOH HOH . K 4 HOH A 90 288 90 HOH HOH . K 4 HOH A 91 289 91 HOH HOH . K 4 HOH A 92 290 92 HOH HOH . K 4 HOH A 93 291 93 HOH HOH . K 4 HOH A 94 292 94 HOH HOH . K 4 HOH A 95 293 95 HOH HOH . K 4 HOH A 96 294 96 HOH HOH . K 4 HOH A 97 295 97 HOH HOH . K 4 HOH A 98 296 98 HOH HOH . K 4 HOH A 99 297 99 HOH HOH . K 4 HOH A 100 298 100 HOH HOH . K 4 HOH A 101 299 101 HOH HOH . K 4 HOH A 102 300 102 HOH HOH . K 4 HOH A 103 301 103 HOH HOH . K 4 HOH A 104 302 104 HOH HOH . K 4 HOH A 105 303 105 HOH HOH . K 4 HOH A 106 304 106 HOH HOH . K 4 HOH A 107 305 107 HOH HOH . K 4 HOH A 108 306 108 HOH HOH . K 4 HOH A 109 307 109 HOH HOH . K 4 HOH A 110 308 110 HOH HOH . K 4 HOH A 111 309 111 HOH HOH . K 4 HOH A 112 310 112 HOH HOH . K 4 HOH A 113 311 113 HOH HOH . K 4 HOH A 114 312 114 HOH HOH . K 4 HOH A 115 313 115 HOH HOH . K 4 HOH A 116 314 116 HOH HOH . K 4 HOH A 117 315 117 HOH HOH . K 4 HOH A 118 316 118 HOH HOH . K 4 HOH A 119 317 119 HOH HOH . K 4 HOH A 120 318 120 HOH HOH . K 4 HOH A 121 319 121 HOH HOH . K 4 HOH A 122 320 122 HOH HOH . K 4 HOH A 123 321 123 HOH HOH . K 4 HOH A 124 322 124 HOH HOH . K 4 HOH A 125 323 125 HOH HOH . K 4 HOH A 126 324 126 HOH HOH . K 4 HOH A 127 325 127 HOH HOH . K 4 HOH A 128 326 128 HOH HOH . K 4 HOH A 129 327 129 HOH HOH . K 4 HOH A 130 328 130 HOH HOH . K 4 HOH A 131 329 131 HOH HOH . K 4 HOH A 132 330 132 HOH HOH . K 4 HOH A 133 331 133 HOH HOH . K 4 HOH A 134 332 134 HOH HOH . K 4 HOH A 135 333 135 HOH HOH . K 4 HOH A 136 334 136 HOH HOH . K 4 HOH A 137 335 137 HOH HOH . K 4 HOH A 138 336 138 HOH HOH . K 4 HOH A 139 337 139 HOH HOH . K 4 HOH A 140 338 140 HOH HOH . K 4 HOH A 141 339 141 HOH HOH . K 4 HOH A 142 340 142 HOH HOH . K 4 HOH A 143 341 143 HOH HOH . K 4 HOH A 144 342 144 HOH HOH . K 4 HOH A 145 343 145 HOH HOH . K 4 HOH A 146 344 146 HOH HOH . K 4 HOH A 147 345 147 HOH HOH . K 4 HOH A 148 346 148 HOH HOH . K 4 HOH A 149 347 149 HOH HOH . K 4 HOH A 150 348 150 HOH HOH . K 4 HOH A 151 349 151 HOH HOH . K 4 HOH A 152 350 152 HOH HOH . K 4 HOH A 153 351 153 HOH HOH . K 4 HOH A 154 352 154 HOH HOH . K 4 HOH A 155 353 155 HOH HOH . K 4 HOH A 156 354 156 HOH HOH . K 4 HOH A 157 355 157 HOH HOH . K 4 HOH A 158 356 158 HOH HOH . K 4 HOH A 159 357 159 HOH HOH . K 4 HOH A 160 358 160 HOH HOH . K 4 HOH A 161 359 161 HOH HOH . K 4 HOH A 162 360 162 HOH HOH . K 4 HOH A 163 361 163 HOH HOH . K 4 HOH A 164 362 164 HOH HOH . K 4 HOH A 165 363 165 HOH HOH . K 4 HOH A 166 364 166 HOH HOH . K 4 HOH A 167 365 167 HOH HOH . K 4 HOH A 168 366 168 HOH HOH . K 4 HOH A 169 367 169 HOH HOH . K 4 HOH A 170 368 170 HOH HOH . K 4 HOH A 171 369 171 HOH HOH . K 4 HOH A 172 370 172 HOH HOH . K 4 HOH A 173 371 173 HOH HOH . K 4 HOH A 174 372 174 HOH HOH . K 4 HOH A 175 373 175 HOH HOH . K 4 HOH A 176 374 176 HOH HOH . K 4 HOH A 177 375 177 HOH HOH . K 4 HOH A 178 376 178 HOH HOH . K 4 HOH A 179 377 179 HOH HOH . K 4 HOH A 180 378 180 HOH HOH . K 4 HOH A 181 379 181 HOH HOH . K 4 HOH A 182 380 182 HOH HOH . K 4 HOH A 183 381 183 HOH HOH . K 4 HOH A 184 382 184 HOH HOH . K 4 HOH A 185 383 185 HOH HOH . K 4 HOH A 186 384 186 HOH HOH . K 4 HOH A 187 385 187 HOH HOH . K 4 HOH A 188 386 188 HOH HOH . K 4 HOH A 189 387 189 HOH HOH . K 4 HOH A 190 388 190 HOH HOH . K 4 HOH A 191 389 191 HOH HOH . K 4 HOH A 192 390 192 HOH HOH . K 4 HOH A 193 391 193 HOH HOH . K 4 HOH A 194 392 194 HOH HOH . K 4 HOH A 195 393 195 HOH HOH . K 4 HOH A 196 394 196 HOH HOH . K 4 HOH A 197 395 197 HOH HOH . K 4 HOH A 198 396 198 HOH HOH . K 4 HOH A 199 397 199 HOH HOH . K 4 HOH A 200 398 200 HOH HOH . K 4 HOH A 201 399 201 HOH HOH . K 4 HOH A 202 400 202 HOH HOH . K 4 HOH A 203 401 203 HOH HOH . K 4 HOH A 204 402 204 HOH HOH . K 4 HOH A 205 403 205 HOH HOH . K 4 HOH A 206 404 206 HOH HOH . K 4 HOH A 207 405 207 HOH HOH . K 4 HOH A 208 406 208 HOH HOH . K 4 HOH A 209 407 209 HOH HOH . K 4 HOH A 210 408 210 HOH HOH . K 4 HOH A 211 409 211 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 3 -29.373 35.955 -9.425 1 27.65 ? C1 EDO 196 A 1 HETATM 2 O O1 EDO . . . H 3 -28.095 36.039 -10.065 1 24.41 ? O1 EDO 196 A 1 HETATM 3 C C2 EDO . . . H 3 -30.425 36.544 -10.351 1 27.95 ? C2 EDO 196 A 1 HETATM 4 O O2 EDO . . . H 3 -30.117 37.93 -10.555 1 30.09 ? O2 EDO 196 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #