data_3B3K # _model_server_result.job_id mA3hKGWokvBoIA3jb91IgA _model_server_result.datetime_utc '2024-12-03 20:08:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b3k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3B3K # _exptl.entry_id 3B3K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 318.366 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-(biphenyl-4-yloxy)-3-phenylpropanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.4 _cell.angle_gamma 90 _cell.entry_id 3B3K _cell.length_a 93.144 _cell.length_b 61.569 _cell.length_c 118.797 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B3K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,C,D 2 1 B,E 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.572 30.7845 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H18 O3' _chem_comp.formula_weight 318.366 _chem_comp.id LRG _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-(biphenyl-4-yloxy)-3-phenylpropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CAF LRG doub 194 n y CAC CAE LRG sing 195 n y CAF CAJ LRG sing 196 n y CAE CAI LRG doub 197 n y CAJ CAT LRG doub 198 n y CAI CAT LRG sing 199 n y CAT CAQ LRG sing 200 n n CAG CAD LRG doub 201 n y CAG CAK LRG sing 202 n y CAD CAH LRG sing 203 n y CAO CAM LRG doub 204 n y CAO CAW LRG sing 205 n y CAK CAV LRG doub 206 n y CAM CAU LRG sing 207 n y CAH CAL LRG doub 208 n y CAV CAL LRG sing 209 n y CAV CAW LRG sing 210 n y OAR CAU LRG sing 211 n n OAR CAX LRG sing 212 n n CAW CAP LRG doub 213 n y CAU CAN LRG doub 214 n y CAP CAN LRG sing 215 n y CAQ CAX LRG sing 216 n n CAX CAS LRG sing 217 n n CAS OAA LRG doub 218 n n CAS OAB LRG sing 219 n n CAI HAI LRG sing 220 n n CAE HAE LRG sing 221 n n CAC HAC LRG sing 222 n n CAF HAF LRG sing 223 n n CAJ HAJ LRG sing 224 n n CAQ HAQ LRG sing 225 n n CAQ HAQA LRG sing 226 n n CAX HAX LRG sing 227 n n CAN HAN LRG sing 228 n n CAP HAP LRG sing 229 n n CAM HAM LRG sing 230 n n CAO HAO LRG sing 231 n n CAK HAK LRG sing 232 n n CAG HAG LRG sing 233 n n CAD HAD LRG sing 234 n n CAH HAH LRG sing 235 n n CAL HAL LRG sing 236 n n OAB HAB LRG sing 237 n n # _atom_sites.entry_id 3B3K _atom_sites.fract_transf_matrix[1][1] 0.010736 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002558 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008653 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LRG A 1 1 1 LRG LRG . D 3 HOH A 1 477 477 HOH HOH . D 3 HOH A 2 478 478 HOH HOH . D 3 HOH A 3 479 479 HOH HOH . D 3 HOH A 4 480 480 HOH HOH . D 3 HOH A 5 481 481 HOH HOH . D 3 HOH A 6 482 482 HOH HOH . D 3 HOH A 7 483 483 HOH HOH . D 3 HOH A 8 484 484 HOH HOH . D 3 HOH A 9 485 485 HOH HOH . D 3 HOH A 10 486 486 HOH HOH . D 3 HOH A 11 487 487 HOH HOH . D 3 HOH A 12 488 488 HOH HOH . D 3 HOH A 13 489 489 HOH HOH . D 3 HOH A 14 490 490 HOH HOH . D 3 HOH A 15 491 491 HOH HOH . D 3 HOH A 16 492 492 HOH HOH . D 3 HOH A 17 493 493 HOH HOH . D 3 HOH A 18 494 494 HOH HOH . D 3 HOH A 19 495 495 HOH HOH . D 3 HOH A 20 496 496 HOH HOH . D 3 HOH A 21 497 497 HOH HOH . D 3 HOH A 22 498 498 HOH HOH . D 3 HOH A 23 499 499 HOH HOH . D 3 HOH A 24 500 500 HOH HOH . D 3 HOH A 25 501 501 HOH HOH . D 3 HOH A 26 502 502 HOH HOH . D 3 HOH A 27 503 503 HOH HOH . D 3 HOH A 28 504 504 HOH HOH . D 3 HOH A 29 505 505 HOH HOH . D 3 HOH A 30 506 506 HOH HOH . D 3 HOH A 31 507 507 HOH HOH . D 3 HOH A 32 508 508 HOH HOH . D 3 HOH A 33 509 509 HOH HOH . D 3 HOH A 34 510 510 HOH HOH . D 3 HOH A 35 511 511 HOH HOH . D 3 HOH A 36 512 512 HOH HOH . D 3 HOH A 37 513 513 HOH HOH . D 3 HOH A 38 514 514 HOH HOH . D 3 HOH A 39 515 515 HOH HOH . D 3 HOH A 40 516 516 HOH HOH . D 3 HOH A 41 517 517 HOH HOH . D 3 HOH A 42 518 518 HOH HOH . D 3 HOH A 43 519 519 HOH HOH . D 3 HOH A 44 520 520 HOH HOH . D 3 HOH A 45 521 521 HOH HOH . D 3 HOH A 46 522 522 HOH HOH . D 3 HOH A 47 523 523 HOH HOH . D 3 HOH A 48 524 524 HOH HOH . D 3 HOH A 49 525 525 HOH HOH . D 3 HOH A 50 526 526 HOH HOH . D 3 HOH A 51 527 527 HOH HOH . D 3 HOH A 52 528 528 HOH HOH . D 3 HOH A 53 529 529 HOH HOH . D 3 HOH A 54 530 530 HOH HOH . D 3 HOH A 55 531 531 HOH HOH . D 3 HOH A 56 532 532 HOH HOH . D 3 HOH A 57 533 533 HOH HOH . D 3 HOH A 58 534 534 HOH HOH . D 3 HOH A 59 535 535 HOH HOH . D 3 HOH A 60 536 536 HOH HOH . D 3 HOH A 61 537 537 HOH HOH . D 3 HOH A 62 538 538 HOH HOH . D 3 HOH A 63 539 539 HOH HOH . D 3 HOH A 64 540 540 HOH HOH . D 3 HOH A 65 541 541 HOH HOH . D 3 HOH A 66 542 542 HOH HOH . D 3 HOH A 67 543 543 HOH HOH . D 3 HOH A 68 544 544 HOH HOH . D 3 HOH A 69 545 545 HOH HOH . D 3 HOH A 70 546 546 HOH HOH . D 3 HOH A 71 547 547 HOH HOH . D 3 HOH A 72 548 548 HOH HOH . D 3 HOH A 73 549 549 HOH HOH . D 3 HOH A 74 550 550 HOH HOH . D 3 HOH A 75 551 551 HOH HOH . D 3 HOH A 76 552 552 HOH HOH . D 3 HOH A 77 553 553 HOH HOH . D 3 HOH A 78 554 554 HOH HOH . D 3 HOH A 79 555 555 HOH HOH . D 3 HOH A 80 556 556 HOH HOH . D 3 HOH A 81 557 557 HOH HOH . D 3 HOH A 82 558 558 HOH HOH . D 3 HOH A 83 559 559 HOH HOH . D 3 HOH A 84 560 560 HOH HOH . D 3 HOH A 85 561 561 HOH HOH . D 3 HOH A 86 562 562 HOH HOH . D 3 HOH A 87 563 563 HOH HOH . D 3 HOH A 88 564 564 HOH HOH . D 3 HOH A 89 565 565 HOH HOH . D 3 HOH A 90 566 566 HOH HOH . D 3 HOH A 91 567 567 HOH HOH . D 3 HOH A 92 568 568 HOH HOH . D 3 HOH A 93 569 569 HOH HOH . D 3 HOH A 94 570 570 HOH HOH . D 3 HOH A 95 571 571 HOH HOH . D 3 HOH A 96 572 572 HOH HOH . D 3 HOH A 97 573 573 HOH HOH . D 3 HOH A 98 574 574 HOH HOH . D 3 HOH A 99 575 575 HOH HOH . D 3 HOH A 100 576 576 HOH HOH . D 3 HOH A 101 577 577 HOH HOH . D 3 HOH A 102 578 578 HOH HOH . D 3 HOH A 103 579 579 HOH HOH . D 3 HOH A 104 580 580 HOH HOH . E 3 HOH B 1 477 477 HOH HOH . E 3 HOH B 2 478 478 HOH HOH . E 3 HOH B 3 479 479 HOH HOH . E 3 HOH B 4 480 480 HOH HOH . E 3 HOH B 5 481 481 HOH HOH . E 3 HOH B 6 482 482 HOH HOH . E 3 HOH B 7 483 483 HOH HOH . E 3 HOH B 8 484 484 HOH HOH . E 3 HOH B 9 485 485 HOH HOH . E 3 HOH B 10 486 486 HOH HOH . E 3 HOH B 11 487 487 HOH HOH . E 3 HOH B 12 488 488 HOH HOH . E 3 HOH B 13 489 489 HOH HOH . E 3 HOH B 14 490 490 HOH HOH . E 3 HOH B 15 491 491 HOH HOH . E 3 HOH B 16 492 492 HOH HOH . E 3 HOH B 17 493 493 HOH HOH . E 3 HOH B 18 494 494 HOH HOH . E 3 HOH B 19 495 495 HOH HOH . E 3 HOH B 20 496 496 HOH HOH . E 3 HOH B 21 497 497 HOH HOH . E 3 HOH B 22 498 498 HOH HOH . E 3 HOH B 23 499 499 HOH HOH . E 3 HOH B 24 500 500 HOH HOH . E 3 HOH B 25 501 501 HOH HOH . E 3 HOH B 26 502 502 HOH HOH . E 3 HOH B 27 503 503 HOH HOH . E 3 HOH B 28 504 504 HOH HOH . E 3 HOH B 29 505 505 HOH HOH . E 3 HOH B 30 506 506 HOH HOH . E 3 HOH B 31 507 507 HOH HOH . E 3 HOH B 32 508 508 HOH HOH . E 3 HOH B 33 509 509 HOH HOH . E 3 HOH B 34 510 510 HOH HOH . E 3 HOH B 35 511 511 HOH HOH . E 3 HOH B 36 512 512 HOH HOH . E 3 HOH B 37 513 513 HOH HOH . E 3 HOH B 38 514 514 HOH HOH . E 3 HOH B 39 515 515 HOH HOH . E 3 HOH B 40 516 516 HOH HOH . E 3 HOH B 41 517 517 HOH HOH . E 3 HOH B 42 518 518 HOH HOH . E 3 HOH B 43 519 519 HOH HOH . E 3 HOH B 44 520 520 HOH HOH . E 3 HOH B 45 521 521 HOH HOH . E 3 HOH B 46 522 522 HOH HOH . E 3 HOH B 47 523 523 HOH HOH . E 3 HOH B 48 524 524 HOH HOH . E 3 HOH B 49 525 525 HOH HOH . E 3 HOH B 50 526 526 HOH HOH . E 3 HOH B 51 527 527 HOH HOH . E 3 HOH B 52 528 528 HOH HOH . E 3 HOH B 53 529 529 HOH HOH . E 3 HOH B 54 530 530 HOH HOH . E 3 HOH B 55 531 531 HOH HOH . E 3 HOH B 56 532 532 HOH HOH . E 3 HOH B 57 533 533 HOH HOH . E 3 HOH B 58 534 534 HOH HOH . E 3 HOH B 59 535 535 HOH HOH . E 3 HOH B 60 536 536 HOH HOH . E 3 HOH B 61 537 537 HOH HOH . E 3 HOH B 62 538 538 HOH HOH . E 3 HOH B 63 539 539 HOH HOH . E 3 HOH B 64 540 540 HOH HOH . E 3 HOH B 65 541 541 HOH HOH . E 3 HOH B 66 542 542 HOH HOH . E 3 HOH B 67 543 543 HOH HOH . E 3 HOH B 68 544 544 HOH HOH . E 3 HOH B 69 545 545 HOH HOH . E 3 HOH B 70 546 546 HOH HOH . E 3 HOH B 71 547 547 HOH HOH . E 3 HOH B 72 548 548 HOH HOH . E 3 HOH B 73 549 549 HOH HOH . E 3 HOH B 74 550 550 HOH HOH . E 3 HOH B 75 551 551 HOH HOH . E 3 HOH B 76 552 552 HOH HOH . E 3 HOH B 77 553 553 HOH HOH . E 3 HOH B 78 554 554 HOH HOH . E 3 HOH B 79 555 555 HOH HOH . E 3 HOH B 80 556 556 HOH HOH . E 3 HOH B 81 557 557 HOH HOH . E 3 HOH B 82 558 558 HOH HOH . E 3 HOH B 83 559 559 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAI LRG . . . C 2 16.602 61.279 16.446 1 56.86 ? CAI LRG 1 A 1 HETATM 2 C CAE LRG . . . C 2 16.335 61.119 15.087 1 56.65 ? CAE LRG 1 A 1 HETATM 3 C CAC LRG . . . C 2 17.372 60.817 14.207 1 56.85 ? CAC LRG 1 A 1 HETATM 4 C CAF LRG . . . C 2 18.67 60.672 14.684 1 58.03 ? CAF LRG 1 A 1 HETATM 5 C CAJ LRG . . . C 2 18.935 60.83 16.04 1 58.82 ? CAJ LRG 1 A 1 HETATM 6 C CAT LRG . . . C 2 17.902 61.135 16.923 1 57.11 ? CAT LRG 1 A 1 HETATM 7 C CAQ LRG . . . C 2 18.2 61.334 18.412 1 60.02 ? CAQ LRG 1 A 1 HETATM 8 C CAX LRG . . . C 2 18.796 62.715 18.685 1 59.64 ? CAX LRG 1 A 1 HETATM 9 C CAS LRG . . . C 2 19.08 62.832 20.185 1 59.61 ? CAS LRG 1 A 1 HETATM 10 O OAB LRG . . . C 2 18.116 63.11 20.932 1 59.21 ? OAB LRG 1 A 1 HETATM 11 O OAA LRG . . . C 2 20.252 62.646 20.577 1 59.77 ? OAA LRG 1 A 1 HETATM 12 O OAR LRG . . . C 2 19.988 62.856 17.895 1 62.63 ? OAR LRG 1 A 1 HETATM 13 C CAU LRG . . . C 2 20.636 64.058 17.957 1 64.57 ? CAU LRG 1 A 1 HETATM 14 C CAN LRG . . . C 2 19.991 65.231 18.341 1 65.03 ? CAN LRG 1 A 1 HETATM 15 C CAP LRG . . . C 2 20.669 66.443 18.317 1 64.6 ? CAP LRG 1 A 1 HETATM 16 C CAM LRG . . . C 2 21.969 64.109 17.565 1 64.77 ? CAM LRG 1 A 1 HETATM 17 C CAO LRG . . . C 2 22.643 65.325 17.538 1 66.93 ? CAO LRG 1 A 1 HETATM 18 C CAW LRG . . . C 2 22.001 66.505 17.907 1 67.27 ? CAW LRG 1 A 1 HETATM 19 C CAV LRG . . . C 2 22.652 67.731 17.79 1 69.29 ? CAV LRG 1 A 1 HETATM 20 C CAK LRG . . . C 2 24.021 67.786 17.54 1 69.51 ? CAK LRG 1 A 1 HETATM 21 C CAG LRG . . . C 2 24.67 69.011 17.401 1 69.47 ? CAG LRG 1 A 1 HETATM 22 C CAD LRG . . . C 2 23.951 70.192 17.512 1 68.97 ? CAD LRG 1 A 1 HETATM 23 C CAH LRG . . . C 2 22.584 70.152 17.764 1 69.79 ? CAH LRG 1 A 1 HETATM 24 C CAL LRG . . . C 2 21.94 68.924 17.903 1 69.35 ? CAL LRG 1 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 508 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 24 #