data_3B56 # _model_server_result.job_id 3IxjIV_viBzfQP3JtIyLdw _model_server_result.datetime_utc '2024-11-27 00:14:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b56 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3000}' # _entry.id 3B56 # _exptl.entry_id 3B56 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 389.914 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXY-3,5-DIIODO-BENZOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3B56 _cell.length_a 42.539 _cell.length_b 85.757 _cell.length_c 64.346 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B56 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -42.539 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C7 H4 I2 O3' _chem_comp.formula_weight 389.914 _chem_comp.id DIU _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXY-3,5-DIIODO-BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-HYDROXY-3,5-DIIODOBENZOIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 DIU doub 83 n n C O2 DIU sing 84 n n C C1 DIU sing 85 n n O2 H2 DIU sing 86 n n O3 C2 DIU sing 87 n n O3 H3 DIU sing 88 n n C1 C2 DIU doub 89 n y C1 C6 DIU sing 90 n y C2 C3 DIU sing 91 n y C3 C4 DIU doub 92 n y C3 I1 DIU sing 93 n n C4 C5 DIU sing 94 n y C4 H4 DIU sing 95 n n C5 C6 DIU doub 96 n y C5 I2 DIU sing 97 n n C6 H6 DIU sing 98 n n # _atom_sites.entry_id 3B56 _atom_sites.fract_transf_matrix[1][1] 0.023508 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015541 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DIU A 1 2000 2000 DIU DRG . D 2 DIU B 1 3000 3000 DIU DRG . E 3 HOH A 1 5001 5001 HOH HOH . E 3 HOH A 2 5002 5002 HOH HOH . E 3 HOH A 3 5003 5003 HOH HOH . E 3 HOH A 4 5005 5005 HOH HOH . E 3 HOH A 5 5007 5007 HOH HOH . E 3 HOH A 6 5008 5008 HOH HOH . E 3 HOH A 7 5009 5009 HOH HOH . E 3 HOH A 8 5010 5010 HOH HOH . E 3 HOH A 9 5011 5011 HOH HOH . E 3 HOH A 10 5012 5012 HOH HOH . E 3 HOH A 11 5013 5013 HOH HOH . E 3 HOH A 12 5014 5014 HOH HOH . E 3 HOH A 13 5015 5015 HOH HOH . E 3 HOH A 14 5016 5016 HOH HOH . E 3 HOH A 15 5017 5017 HOH HOH . E 3 HOH A 16 5018 5018 HOH HOH . E 3 HOH A 17 5019 5019 HOH HOH . E 3 HOH A 18 5020 5020 HOH HOH . E 3 HOH A 19 5022 5022 HOH HOH . E 3 HOH A 20 5023 5023 HOH HOH . E 3 HOH A 21 5027 5027 HOH HOH . E 3 HOH A 22 5029 5029 HOH HOH . E 3 HOH A 23 5030 5030 HOH HOH . E 3 HOH A 24 5031 5031 HOH HOH . E 3 HOH A 25 5049 5049 HOH HOH . E 3 HOH A 26 5052 5052 HOH HOH . E 3 HOH A 27 5053 5053 HOH HOH . E 3 HOH A 28 5054 5054 HOH HOH . E 3 HOH A 29 5057 5057 HOH HOH . E 3 HOH A 30 5058 5058 HOH HOH . E 3 HOH A 31 5059 5059 HOH HOH . E 3 HOH A 32 5060 5060 HOH HOH . E 3 HOH A 33 5061 5061 HOH HOH . E 3 HOH A 34 5062 5062 HOH HOH . E 3 HOH A 35 5063 5063 HOH HOH . E 3 HOH A 36 5066 5066 HOH HOH . E 3 HOH A 37 5067 5067 HOH HOH . E 3 HOH A 38 5068 5068 HOH HOH . E 3 HOH A 39 5069 5069 HOH HOH . E 3 HOH A 40 5071 5071 HOH HOH . E 3 HOH A 41 5073 5073 HOH HOH . E 3 HOH A 42 5074 5074 HOH HOH . E 3 HOH A 43 5076 5076 HOH HOH . E 3 HOH A 44 5077 5077 HOH HOH . E 3 HOH A 45 5078 5078 HOH HOH . E 3 HOH A 46 5080 5080 HOH HOH . E 3 HOH A 47 5081 5081 HOH HOH . E 3 HOH A 48 5082 5082 HOH HOH . E 3 HOH A 49 5083 5083 HOH HOH . E 3 HOH A 50 5084 5084 HOH HOH . E 3 HOH A 51 5085 5085 HOH HOH . E 3 HOH A 52 5086 5086 HOH HOH . E 3 HOH A 53 5087 5087 HOH HOH . E 3 HOH A 54 5109 5109 HOH HOH . E 3 HOH A 55 5110 5110 HOH HOH . E 3 HOH A 56 5111 5111 HOH HOH . E 3 HOH A 57 5112 5112 HOH HOH . E 3 HOH A 58 5113 5113 HOH HOH . E 3 HOH A 59 5117 5117 HOH HOH . E 3 HOH A 60 5118 5118 HOH HOH . E 3 HOH A 61 5119 5119 HOH HOH . E 3 HOH A 62 5121 5121 HOH HOH . E 3 HOH A 63 5151 5151 HOH HOH . E 3 HOH A 64 5152 5152 HOH HOH . E 3 HOH A 65 5153 5153 HOH HOH . E 3 HOH A 66 5154 5154 HOH HOH . E 3 HOH A 67 5155 5155 HOH HOH . E 3 HOH A 68 5159 5159 HOH HOH . E 3 HOH A 69 5161 5161 HOH HOH . E 3 HOH A 70 5175 5175 HOH HOH . E 3 HOH A 71 5176 5176 HOH HOH . E 3 HOH A 72 5178 5178 HOH HOH . E 3 HOH A 73 5179 5179 HOH HOH . E 3 HOH A 74 5184 5184 HOH HOH . E 3 HOH A 75 5193 5193 HOH HOH . E 3 HOH A 76 5201 5201 HOH HOH . E 3 HOH A 77 5202 5202 HOH HOH . E 3 HOH A 78 5203 5203 HOH HOH . E 3 HOH A 79 5205 5205 HOH HOH . E 3 HOH A 80 5217 5217 HOH HOH . E 3 HOH A 81 5218 5218 HOH HOH . E 3 HOH A 82 5402 5402 HOH HOH . E 3 HOH A 83 5403 5403 HOH HOH . E 3 HOH A 84 5501 5501 HOH HOH . E 3 HOH A 85 5502 5502 HOH HOH . E 3 HOH A 86 5503 5503 HOH HOH . E 3 HOH A 87 5504 5504 HOH HOH . E 3 HOH A 88 5505 5505 HOH HOH . E 3 HOH A 89 5506 5506 HOH HOH . E 3 HOH A 90 5507 5507 HOH HOH . E 3 HOH A 91 5508 5508 HOH HOH . E 3 HOH A 92 5509 5509 HOH HOH . E 3 HOH A 93 5511 5511 HOH HOH . E 3 HOH A 94 5512 5512 HOH HOH . E 3 HOH A 95 5513 5513 HOH HOH . E 3 HOH A 96 5514 5514 HOH HOH . E 3 HOH A 97 5515 5515 HOH HOH . E 3 HOH A 98 5516 5516 HOH HOH . E 3 HOH A 99 5517 5517 HOH HOH . E 3 HOH A 100 5518 5518 HOH HOH . E 3 HOH A 101 5519 5519 HOH HOH . E 3 HOH A 102 5520 5520 HOH HOH . E 3 HOH A 103 5527 5527 HOH HOH . F 3 HOH B 1 5021 5021 HOH HOH . F 3 HOH B 2 5025 5025 HOH HOH . F 3 HOH B 3 5026 5026 HOH HOH . F 3 HOH B 4 5028 5028 HOH HOH . F 3 HOH B 5 5032 5032 HOH HOH . F 3 HOH B 6 5033 5033 HOH HOH . F 3 HOH B 7 5034 5034 HOH HOH . F 3 HOH B 8 5035 5035 HOH HOH . F 3 HOH B 9 5036 5036 HOH HOH . F 3 HOH B 10 5037 5037 HOH HOH . F 3 HOH B 11 5038 5038 HOH HOH . F 3 HOH B 12 5039 5039 HOH HOH . F 3 HOH B 13 5040 5040 HOH HOH . F 3 HOH B 14 5041 5041 HOH HOH . F 3 HOH B 15 5042 5042 HOH HOH . F 3 HOH B 16 5043 5043 HOH HOH . F 3 HOH B 17 5046 5046 HOH HOH . F 3 HOH B 18 5047 5047 HOH HOH . F 3 HOH B 19 5048 5048 HOH HOH . F 3 HOH B 20 5050 5050 HOH HOH . F 3 HOH B 21 5079 5079 HOH HOH . F 3 HOH B 22 5089 5089 HOH HOH . F 3 HOH B 23 5091 5091 HOH HOH . F 3 HOH B 24 5092 5092 HOH HOH . F 3 HOH B 25 5094 5094 HOH HOH . F 3 HOH B 26 5095 5095 HOH HOH . F 3 HOH B 27 5097 5097 HOH HOH . F 3 HOH B 28 5098 5098 HOH HOH . F 3 HOH B 29 5099 5099 HOH HOH . F 3 HOH B 30 5100 5100 HOH HOH . F 3 HOH B 31 5101 5101 HOH HOH . F 3 HOH B 32 5103 5103 HOH HOH . F 3 HOH B 33 5105 5105 HOH HOH . F 3 HOH B 34 5106 5106 HOH HOH . F 3 HOH B 35 5107 5107 HOH HOH . F 3 HOH B 36 5114 5114 HOH HOH . F 3 HOH B 37 5115 5115 HOH HOH . F 3 HOH B 38 5157 5157 HOH HOH . F 3 HOH B 39 5158 5158 HOH HOH . F 3 HOH B 40 5162 5162 HOH HOH . F 3 HOH B 41 5163 5163 HOH HOH . F 3 HOH B 42 5164 5164 HOH HOH . F 3 HOH B 43 5165 5165 HOH HOH . F 3 HOH B 44 5167 5167 HOH HOH . F 3 HOH B 45 5168 5168 HOH HOH . F 3 HOH B 46 5169 5169 HOH HOH . F 3 HOH B 47 5170 5170 HOH HOH . F 3 HOH B 48 5171 5171 HOH HOH . F 3 HOH B 49 5185 5185 HOH HOH . F 3 HOH B 50 5186 5186 HOH HOH . F 3 HOH B 51 5187 5187 HOH HOH . F 3 HOH B 52 5195 5195 HOH HOH . F 3 HOH B 53 5197 5197 HOH HOH . F 3 HOH B 54 5199 5199 HOH HOH . F 3 HOH B 55 5206 5206 HOH HOH . F 3 HOH B 56 5207 5207 HOH HOH . F 3 HOH B 57 5208 5208 HOH HOH . F 3 HOH B 58 5209 5209 HOH HOH . F 3 HOH B 59 5210 5210 HOH HOH . F 3 HOH B 60 5215 5215 HOH HOH . F 3 HOH B 61 5216 5216 HOH HOH . F 3 HOH B 62 5232 5232 HOH HOH . F 3 HOH B 63 5234 5234 HOH HOH . F 3 HOH B 64 5400 5400 HOH HOH . F 3 HOH B 65 5401 5401 HOH HOH . F 3 HOH B 66 5510 5510 HOH HOH . F 3 HOH B 67 5521 5521 HOH HOH . F 3 HOH B 68 5522 5522 HOH HOH . F 3 HOH B 69 5523 5523 HOH HOH . F 3 HOH B 70 5524 5524 HOH HOH . F 3 HOH B 71 5525 5525 HOH HOH . F 3 HOH B 72 5526 5526 HOH HOH . F 3 HOH B 73 5528 5528 HOH HOH . F 3 HOH B 74 5529 5529 HOH HOH . F 3 HOH B 75 5530 5530 HOH HOH . F 3 HOH B 76 5531 5531 HOH HOH . F 3 HOH B 77 5532 5532 HOH HOH . F 3 HOH B 78 5533 5533 HOH HOH . F 3 HOH B 79 5534 5534 HOH HOH . F 3 HOH B 80 5535 5535 HOH HOH . F 3 HOH B 81 5536 5536 HOH HOH . F 3 HOH B 82 5537 5537 HOH HOH . F 3 HOH B 83 5538 5538 HOH HOH . F 3 HOH B 84 5539 5539 HOH HOH . F 3 HOH B 85 5540 5540 HOH HOH . F 3 HOH B 86 5541 5541 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C DIU . . . D 2 -21.285 -0.115 -26.701 0.5 16.17 ? C DIU 3000 B 1 HETATM 2 O O1 DIU . . . D 2 -21.213 0.974 -27.309 0.5 20.22 ? O1 DIU 3000 B 1 HETATM 3 O O2 DIU . . . D 2 -21.334 -1.202 -27.312 0.5 20.48 ? O2 DIU 3000 B 1 HETATM 4 O O3 DIU . . . D 2 -21.395 -2.447 -25.108 0.5 13.91 ? O3 DIU 3000 B 1 HETATM 5 C C1 DIU . . . D 2 -21.312 -0.108 -25.19 0.5 14.53 ? C1 DIU 3000 B 1 HETATM 6 C C2 DIU . . . D 2 -21.369 -1.28 -24.438 0.5 13.71 ? C2 DIU 3000 B 1 HETATM 7 C C3 DIU . . . D 2 -21.395 -1.259 -23.037 0.5 13.12 ? C3 DIU 3000 B 1 HETATM 8 C C4 DIU . . . D 2 -21.359 -0.038 -22.389 0.5 14.48 ? C4 DIU 3000 B 1 HETATM 9 C C5 DIU . . . D 2 -21.301 1.118 -23.153 0.5 13.22 ? C5 DIU 3000 B 1 HETATM 10 C C6 DIU . . . D 2 -21.278 1.108 -24.536 0.5 14.29 ? C6 DIU 3000 B 1 HETATM 11 I I1 DIU . . . D 2 -21.473 -3 -21.852 0.5 13.75 ? I1 DIU 3000 B 1 HETATM 12 I I2 DIU . . . D 2 -21.261 2.978 -22.253 0.5 10.9 ? I2 DIU 3000 B 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #