data_3B5I # _model_server_result.job_id kA3xSgVePFBYpXlTQNZWWg _model_server_result.datetime_utc '2024-11-14 20:51:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b5i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 3B5I # _exptl.entry_id 3B5I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.3 _cell.angle_gamma 90 _cell.entry_id 3B5I _cell.length_a 67.27 _cell.length_b 129.4 _cell.length_c 68.33 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B5I _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3B5I _atom_sites.fract_transf_matrix[1][1] 0.014865 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006097 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015818 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 401 401 SAH SAH . D 3 MG A 1 601 601 MG MG . E 2 SAH B 1 401 401 SAH SAH . F 3 MG B 1 601 601 MG MG . G 4 HOH A 1 602 602 HOH HOH . G 4 HOH A 2 603 603 HOH HOH . G 4 HOH A 3 604 604 HOH HOH . G 4 HOH A 4 605 605 HOH HOH . G 4 HOH A 5 606 606 HOH HOH . G 4 HOH A 6 607 607 HOH HOH . G 4 HOH A 7 608 608 HOH HOH . G 4 HOH A 8 609 609 HOH HOH . G 4 HOH A 9 610 610 HOH HOH . G 4 HOH A 10 611 611 HOH HOH . G 4 HOH A 11 612 612 HOH HOH . G 4 HOH A 12 613 613 HOH HOH . G 4 HOH A 13 614 614 HOH HOH . G 4 HOH A 14 615 615 HOH HOH . G 4 HOH A 15 616 616 HOH HOH . G 4 HOH A 16 617 617 HOH HOH . G 4 HOH A 17 618 618 HOH HOH . G 4 HOH A 18 619 619 HOH HOH . G 4 HOH A 19 620 620 HOH HOH . G 4 HOH A 20 621 621 HOH HOH . G 4 HOH A 21 622 622 HOH HOH . G 4 HOH A 22 623 623 HOH HOH . G 4 HOH A 23 624 624 HOH HOH . G 4 HOH A 24 625 625 HOH HOH . G 4 HOH A 25 626 626 HOH HOH . G 4 HOH A 26 627 627 HOH HOH . G 4 HOH A 27 628 628 HOH HOH . G 4 HOH A 28 629 629 HOH HOH . G 4 HOH A 29 630 630 HOH HOH . G 4 HOH A 30 631 631 HOH HOH . G 4 HOH A 31 632 632 HOH HOH . G 4 HOH A 32 633 633 HOH HOH . G 4 HOH A 33 634 634 HOH HOH . G 4 HOH A 34 635 635 HOH HOH . G 4 HOH A 35 636 636 HOH HOH . G 4 HOH A 36 637 637 HOH HOH . G 4 HOH A 37 638 638 HOH HOH . G 4 HOH A 38 639 639 HOH HOH . G 4 HOH A 39 640 640 HOH HOH . G 4 HOH A 40 641 641 HOH HOH . G 4 HOH A 41 642 642 HOH HOH . G 4 HOH A 42 643 643 HOH HOH . G 4 HOH A 43 644 644 HOH HOH . G 4 HOH A 44 645 645 HOH HOH . G 4 HOH A 45 646 646 HOH HOH . G 4 HOH A 46 647 647 HOH HOH . G 4 HOH A 47 648 648 HOH HOH . G 4 HOH A 48 649 649 HOH HOH . G 4 HOH A 49 650 650 HOH HOH . G 4 HOH A 50 651 651 HOH HOH . G 4 HOH A 51 652 652 HOH HOH . G 4 HOH A 52 653 653 HOH HOH . G 4 HOH A 53 654 654 HOH HOH . G 4 HOH A 54 655 655 HOH HOH . G 4 HOH A 55 657 657 HOH HOH . G 4 HOH A 56 658 658 HOH HOH . G 4 HOH A 57 659 659 HOH HOH . G 4 HOH A 58 660 660 HOH HOH . G 4 HOH A 59 661 661 HOH HOH . G 4 HOH A 60 662 662 HOH HOH . G 4 HOH A 61 663 663 HOH HOH . G 4 HOH A 62 664 664 HOH HOH . G 4 HOH A 63 665 665 HOH HOH . G 4 HOH A 64 666 666 HOH HOH . G 4 HOH A 65 667 667 HOH HOH . G 4 HOH A 66 668 668 HOH HOH . G 4 HOH A 67 669 669 HOH HOH . G 4 HOH A 68 670 670 HOH HOH . G 4 HOH A 69 671 671 HOH HOH . G 4 HOH A 70 672 672 HOH HOH . G 4 HOH A 71 673 673 HOH HOH . G 4 HOH A 72 674 674 HOH HOH . H 4 HOH B 1 616 616 HOH HOH . H 4 HOH B 2 617 617 HOH HOH . H 4 HOH B 3 618 618 HOH HOH . H 4 HOH B 4 619 619 HOH HOH . H 4 HOH B 5 620 620 HOH HOH . H 4 HOH B 6 621 621 HOH HOH . H 4 HOH B 7 622 622 HOH HOH . H 4 HOH B 8 623 623 HOH HOH . H 4 HOH B 9 624 624 HOH HOH . H 4 HOH B 10 625 625 HOH HOH . H 4 HOH B 11 626 626 HOH HOH . H 4 HOH B 12 627 627 HOH HOH . H 4 HOH B 13 628 628 HOH HOH . H 4 HOH B 14 629 629 HOH HOH . H 4 HOH B 15 630 630 HOH HOH . H 4 HOH B 16 631 631 HOH HOH . H 4 HOH B 17 632 632 HOH HOH . H 4 HOH B 18 633 633 HOH HOH . H 4 HOH B 19 634 634 HOH HOH . H 4 HOH B 20 635 635 HOH HOH . H 4 HOH B 21 636 636 HOH HOH . H 4 HOH B 22 637 637 HOH HOH . H 4 HOH B 23 638 638 HOH HOH . H 4 HOH B 24 639 639 HOH HOH . H 4 HOH B 25 640 640 HOH HOH . H 4 HOH B 26 641 641 HOH HOH . H 4 HOH B 27 642 642 HOH HOH . H 4 HOH B 28 643 643 HOH HOH . H 4 HOH B 29 644 644 HOH HOH . H 4 HOH B 30 645 645 HOH HOH . H 4 HOH B 31 646 646 HOH HOH . H 4 HOH B 32 647 647 HOH HOH . H 4 HOH B 33 648 648 HOH HOH . H 4 HOH B 34 649 649 HOH HOH . H 4 HOH B 35 650 650 HOH HOH . H 4 HOH B 36 651 651 HOH HOH . H 4 HOH B 37 652 652 HOH HOH . H 4 HOH B 38 653 653 HOH HOH . H 4 HOH B 39 654 654 HOH HOH . H 4 HOH B 40 655 655 HOH HOH . H 4 HOH B 41 656 656 HOH HOH . H 4 HOH B 42 657 657 HOH HOH . H 4 HOH B 43 658 658 HOH HOH . H 4 HOH B 44 659 659 HOH HOH . H 4 HOH B 45 660 660 HOH HOH . H 4 HOH B 46 661 661 HOH HOH . H 4 HOH B 47 662 662 HOH HOH . H 4 HOH B 48 663 663 HOH HOH . H 4 HOH B 49 664 664 HOH HOH . H 4 HOH B 50 665 665 HOH HOH . H 4 HOH B 51 666 666 HOH HOH . H 4 HOH B 52 667 667 HOH HOH . H 4 HOH B 53 668 668 HOH HOH . H 4 HOH B 54 669 669 HOH HOH . H 4 HOH B 55 670 670 HOH HOH . H 4 HOH B 56 671 671 HOH HOH . H 4 HOH B 57 672 672 HOH HOH . H 4 HOH B 58 673 673 HOH HOH . H 4 HOH B 59 674 674 HOH HOH . H 4 HOH B 60 675 675 HOH HOH . H 4 HOH B 61 676 676 HOH HOH . H 4 HOH B 62 677 677 HOH HOH . H 4 HOH B 63 678 678 HOH HOH . H 4 HOH B 64 679 679 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -8.418 _atom_site.Cartn_y -3.483 _atom_site.Cartn_z 34.217 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #