data_3B6B # _model_server_result.job_id N_Rx35tTdSIqHcdOv7GR5Q _model_server_result.datetime_utc '2024-11-24 08:24:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b6b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":138}' # _entry.id 3B6B # _exptl.entry_id 3B6B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3B6B _cell.length_a 79.839 _cell.length_b 152.528 _cell.length_c 184.12 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B6B _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? hexameric 6 author_defined_assembly 1 ? hexameric 6 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,H,K,L,O,P,S,U,W 1 1,2 B,D,F,I,J,M,N,Q,R,T,V,X 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 3_755 -x+2,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 159.678 0 92.06 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 I N N ? 2 K N N ? 2 M N N ? 2 O N N ? 2 Q N N # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3B6B _atom_sites.fract_transf_matrix[1][1] 0.012525 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006556 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005431 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 MG A 1 138 138 MG MG . H 3 DGI A 1 139 139 DGI DGI . I 2 MG B 1 138 138 MG MG . J 3 DGI B 1 140 140 DGI DGI . K 2 MG C 1 138 138 MG MG . L 3 DGI C 1 141 141 DGI DGI . M 2 MG D 1 138 138 MG MG . N 3 DGI D 1 142 142 DGI DGI . O 2 MG E 1 138 138 MG MG . P 3 DGI E 1 143 143 DGI DGI . Q 2 MG F 1 138 138 MG MG . R 3 DGI F 1 144 144 DGI DGI . S 4 HOH A 1 140 139 HOH HOH . S 4 HOH A 2 141 140 HOH HOH . S 4 HOH A 3 142 141 HOH HOH . S 4 HOH A 4 143 142 HOH HOH . S 4 HOH A 5 144 143 HOH HOH . S 4 HOH A 6 145 144 HOH HOH . S 4 HOH A 7 146 145 HOH HOH . S 4 HOH A 8 147 146 HOH HOH . S 4 HOH A 9 148 147 HOH HOH . S 4 HOH A 10 149 148 HOH HOH . S 4 HOH A 11 150 149 HOH HOH . S 4 HOH A 12 151 150 HOH HOH . S 4 HOH A 13 152 151 HOH HOH . S 4 HOH A 14 153 152 HOH HOH . S 4 HOH A 15 154 153 HOH HOH . S 4 HOH A 16 155 154 HOH HOH . S 4 HOH A 17 156 155 HOH HOH . S 4 HOH A 18 157 156 HOH HOH . S 4 HOH A 19 158 157 HOH HOH . S 4 HOH A 20 159 158 HOH HOH . S 4 HOH A 21 160 159 HOH HOH . S 4 HOH A 22 161 160 HOH HOH . S 4 HOH A 23 162 161 HOH HOH . S 4 HOH A 24 163 162 HOH HOH . S 4 HOH A 25 164 163 HOH HOH . S 4 HOH A 26 165 164 HOH HOH . S 4 HOH A 27 166 165 HOH HOH . S 4 HOH A 28 167 166 HOH HOH . S 4 HOH A 29 168 167 HOH HOH . S 4 HOH A 30 169 168 HOH HOH . S 4 HOH A 31 170 169 HOH HOH . S 4 HOH A 32 171 170 HOH HOH . S 4 HOH A 33 172 171 HOH HOH . S 4 HOH A 34 173 172 HOH HOH . S 4 HOH A 35 174 173 HOH HOH . S 4 HOH A 36 175 174 HOH HOH . S 4 HOH A 37 176 175 HOH HOH . S 4 HOH A 38 177 176 HOH HOH . S 4 HOH A 39 178 177 HOH HOH . S 4 HOH A 40 179 178 HOH HOH . S 4 HOH A 41 180 179 HOH HOH . S 4 HOH A 42 181 180 HOH HOH . S 4 HOH A 43 182 181 HOH HOH . S 4 HOH A 44 183 182 HOH HOH . S 4 HOH A 45 184 183 HOH HOH . T 4 HOH B 1 145 145 HOH HOH . T 4 HOH B 2 146 146 HOH HOH . T 4 HOH B 3 147 147 HOH HOH . T 4 HOH B 4 148 148 HOH HOH . T 4 HOH B 5 149 149 HOH HOH . T 4 HOH B 6 150 150 HOH HOH . T 4 HOH B 7 151 151 HOH HOH . T 4 HOH B 8 152 152 HOH HOH . T 4 HOH B 9 153 153 HOH HOH . T 4 HOH B 10 154 154 HOH HOH . T 4 HOH B 11 155 155 HOH HOH . T 4 HOH B 12 156 156 HOH HOH . T 4 HOH B 13 157 157 HOH HOH . T 4 HOH B 14 158 158 HOH HOH . T 4 HOH B 15 159 159 HOH HOH . T 4 HOH B 16 160 160 HOH HOH . T 4 HOH B 17 161 161 HOH HOH . T 4 HOH B 18 162 162 HOH HOH . T 4 HOH B 19 163 163 HOH HOH . T 4 HOH B 20 164 164 HOH HOH . T 4 HOH B 21 165 165 HOH HOH . T 4 HOH B 22 166 166 HOH HOH . T 4 HOH B 23 167 167 HOH HOH . T 4 HOH B 24 168 168 HOH HOH . T 4 HOH B 25 169 169 HOH HOH . T 4 HOH B 26 170 170 HOH HOH . T 4 HOH B 27 171 171 HOH HOH . T 4 HOH B 28 172 172 HOH HOH . T 4 HOH B 29 173 173 HOH HOH . T 4 HOH B 30 174 174 HOH HOH . T 4 HOH B 31 175 175 HOH HOH . T 4 HOH B 32 176 176 HOH HOH . T 4 HOH B 33 177 177 HOH HOH . T 4 HOH B 34 178 178 HOH HOH . T 4 HOH B 35 179 179 HOH HOH . T 4 HOH B 36 180 180 HOH HOH . T 4 HOH B 37 181 181 HOH HOH . T 4 HOH B 38 182 182 HOH HOH . T 4 HOH B 39 183 183 HOH HOH . T 4 HOH B 40 184 184 HOH HOH . T 4 HOH B 41 186 186 HOH HOH . T 4 HOH B 42 187 187 HOH HOH . T 4 HOH B 43 188 188 HOH HOH . T 4 HOH B 44 189 189 HOH HOH . T 4 HOH B 45 190 190 HOH HOH . T 4 HOH B 46 191 191 HOH HOH . T 4 HOH B 47 192 192 HOH HOH . T 4 HOH B 48 193 193 HOH HOH . T 4 HOH B 49 194 194 HOH HOH . T 4 HOH B 50 196 196 HOH HOH . T 4 HOH B 51 197 197 HOH HOH . T 4 HOH B 52 198 198 HOH HOH . T 4 HOH B 53 199 199 HOH HOH . T 4 HOH B 54 200 200 HOH HOH . T 4 HOH B 55 201 201 HOH HOH . T 4 HOH B 56 203 203 HOH HOH . T 4 HOH B 57 204 204 HOH HOH . U 4 HOH C 1 185 185 HOH HOH . U 4 HOH C 2 186 139 HOH HOH . U 4 HOH C 3 187 140 HOH HOH . U 4 HOH C 4 188 141 HOH HOH . U 4 HOH C 5 189 142 HOH HOH . U 4 HOH C 6 190 143 HOH HOH . U 4 HOH C 7 191 144 HOH HOH . U 4 HOH C 8 192 145 HOH HOH . U 4 HOH C 9 193 146 HOH HOH . U 4 HOH C 10 194 147 HOH HOH . U 4 HOH C 11 195 148 HOH HOH . U 4 HOH C 12 196 149 HOH HOH . U 4 HOH C 13 197 150 HOH HOH . U 4 HOH C 14 198 151 HOH HOH . U 4 HOH C 15 199 152 HOH HOH . U 4 HOH C 16 200 153 HOH HOH . U 4 HOH C 17 201 154 HOH HOH . U 4 HOH C 18 202 155 HOH HOH . U 4 HOH C 19 203 156 HOH HOH . U 4 HOH C 20 204 157 HOH HOH . U 4 HOH C 21 205 158 HOH HOH . U 4 HOH C 22 206 159 HOH HOH . U 4 HOH C 23 207 160 HOH HOH . U 4 HOH C 24 208 161 HOH HOH . U 4 HOH C 25 209 162 HOH HOH . U 4 HOH C 26 210 163 HOH HOH . U 4 HOH C 27 211 164 HOH HOH . U 4 HOH C 28 212 165 HOH HOH . U 4 HOH C 29 213 166 HOH HOH . U 4 HOH C 30 214 167 HOH HOH . U 4 HOH C 31 215 168 HOH HOH . U 4 HOH C 32 216 169 HOH HOH . U 4 HOH C 33 217 170 HOH HOH . U 4 HOH C 34 218 171 HOH HOH . U 4 HOH C 35 219 172 HOH HOH . U 4 HOH C 36 220 173 HOH HOH . U 4 HOH C 37 221 174 HOH HOH . U 4 HOH C 38 222 175 HOH HOH . U 4 HOH C 39 223 176 HOH HOH . U 4 HOH C 40 224 177 HOH HOH . U 4 HOH C 41 225 178 HOH HOH . U 4 HOH C 42 226 179 HOH HOH . U 4 HOH C 43 227 180 HOH HOH . U 4 HOH C 44 228 181 HOH HOH . U 4 HOH C 45 229 182 HOH HOH . U 4 HOH C 46 230 183 HOH HOH . U 4 HOH C 47 231 184 HOH HOH . U 4 HOH C 48 232 185 HOH HOH . U 4 HOH C 49 233 186 HOH HOH . U 4 HOH C 50 234 187 HOH HOH . U 4 HOH C 51 235 188 HOH HOH . U 4 HOH C 52 236 189 HOH HOH . U 4 HOH C 53 237 190 HOH HOH . U 4 HOH C 54 238 191 HOH HOH . U 4 HOH C 55 239 192 HOH HOH . U 4 HOH C 56 240 193 HOH HOH . U 4 HOH C 57 241 194 HOH HOH . U 4 HOH C 58 242 195 HOH HOH . U 4 HOH C 59 243 196 HOH HOH . U 4 HOH C 60 244 197 HOH HOH . U 4 HOH C 61 245 198 HOH HOH . U 4 HOH C 62 246 199 HOH HOH . U 4 HOH C 63 247 200 HOH HOH . U 4 HOH C 64 248 201 HOH HOH . U 4 HOH C 65 249 202 HOH HOH . U 4 HOH C 66 250 203 HOH HOH . V 4 HOH D 1 143 139 HOH HOH . V 4 HOH D 2 144 140 HOH HOH . V 4 HOH D 3 145 141 HOH HOH . V 4 HOH D 4 146 142 HOH HOH . V 4 HOH D 5 147 143 HOH HOH . V 4 HOH D 6 148 144 HOH HOH . V 4 HOH D 7 149 145 HOH HOH . V 4 HOH D 8 150 146 HOH HOH . V 4 HOH D 9 151 147 HOH HOH . V 4 HOH D 10 152 148 HOH HOH . V 4 HOH D 11 153 149 HOH HOH . V 4 HOH D 12 154 150 HOH HOH . V 4 HOH D 13 155 151 HOH HOH . V 4 HOH D 14 156 152 HOH HOH . V 4 HOH D 15 157 153 HOH HOH . V 4 HOH D 16 158 154 HOH HOH . V 4 HOH D 17 159 155 HOH HOH . V 4 HOH D 18 160 156 HOH HOH . V 4 HOH D 19 161 157 HOH HOH . V 4 HOH D 20 162 158 HOH HOH . V 4 HOH D 21 163 159 HOH HOH . V 4 HOH D 22 164 160 HOH HOH . V 4 HOH D 23 165 161 HOH HOH . V 4 HOH D 24 166 162 HOH HOH . V 4 HOH D 25 167 163 HOH HOH . V 4 HOH D 26 168 164 HOH HOH . V 4 HOH D 27 169 165 HOH HOH . V 4 HOH D 28 170 166 HOH HOH . V 4 HOH D 29 171 167 HOH HOH . V 4 HOH D 30 172 168 HOH HOH . V 4 HOH D 31 173 169 HOH HOH . V 4 HOH D 32 174 170 HOH HOH . V 4 HOH D 33 175 171 HOH HOH . V 4 HOH D 34 176 172 HOH HOH . V 4 HOH D 35 177 173 HOH HOH . V 4 HOH D 36 178 174 HOH HOH . V 4 HOH D 37 179 175 HOH HOH . V 4 HOH D 38 180 176 HOH HOH . V 4 HOH D 39 181 177 HOH HOH . V 4 HOH D 40 182 178 HOH HOH . V 4 HOH D 41 183 179 HOH HOH . V 4 HOH D 42 184 180 HOH HOH . V 4 HOH D 43 185 181 HOH HOH . V 4 HOH D 44 186 182 HOH HOH . V 4 HOH D 45 187 183 HOH HOH . V 4 HOH D 46 188 184 HOH HOH . V 4 HOH D 47 189 185 HOH HOH . V 4 HOH D 48 190 186 HOH HOH . V 4 HOH D 49 191 187 HOH HOH . V 4 HOH D 50 192 188 HOH HOH . V 4 HOH D 51 193 189 HOH HOH . V 4 HOH D 52 194 190 HOH HOH . V 4 HOH D 53 195 191 HOH HOH . W 4 HOH E 1 202 202 HOH HOH . W 4 HOH E 2 203 139 HOH HOH . W 4 HOH E 3 204 140 HOH HOH . W 4 HOH E 4 205 141 HOH HOH . W 4 HOH E 5 206 142 HOH HOH . W 4 HOH E 6 207 143 HOH HOH . W 4 HOH E 7 208 144 HOH HOH . W 4 HOH E 8 209 145 HOH HOH . W 4 HOH E 9 210 146 HOH HOH . W 4 HOH E 10 211 147 HOH HOH . W 4 HOH E 11 212 148 HOH HOH . W 4 HOH E 12 213 149 HOH HOH . W 4 HOH E 13 214 150 HOH HOH . W 4 HOH E 14 215 151 HOH HOH . W 4 HOH E 15 216 152 HOH HOH . W 4 HOH E 16 217 153 HOH HOH . W 4 HOH E 17 218 154 HOH HOH . W 4 HOH E 18 219 155 HOH HOH . W 4 HOH E 19 220 156 HOH HOH . W 4 HOH E 20 221 157 HOH HOH . W 4 HOH E 21 222 158 HOH HOH . W 4 HOH E 22 223 159 HOH HOH . W 4 HOH E 23 224 160 HOH HOH . W 4 HOH E 24 225 161 HOH HOH . W 4 HOH E 25 226 162 HOH HOH . W 4 HOH E 26 227 163 HOH HOH . W 4 HOH E 27 228 164 HOH HOH . W 4 HOH E 28 229 165 HOH HOH . W 4 HOH E 29 230 166 HOH HOH . W 4 HOH E 30 231 167 HOH HOH . W 4 HOH E 31 232 168 HOH HOH . W 4 HOH E 32 233 169 HOH HOH . W 4 HOH E 33 234 170 HOH HOH . W 4 HOH E 34 235 171 HOH HOH . W 4 HOH E 35 236 172 HOH HOH . W 4 HOH E 36 237 173 HOH HOH . W 4 HOH E 37 238 174 HOH HOH . W 4 HOH E 38 239 175 HOH HOH . W 4 HOH E 39 240 176 HOH HOH . W 4 HOH E 40 241 177 HOH HOH . W 4 HOH E 41 242 178 HOH HOH . W 4 HOH E 42 243 179 HOH HOH . W 4 HOH E 43 244 180 HOH HOH . W 4 HOH E 44 245 181 HOH HOH . W 4 HOH E 45 246 182 HOH HOH . W 4 HOH E 46 247 183 HOH HOH . W 4 HOH E 47 248 184 HOH HOH . W 4 HOH E 48 249 185 HOH HOH . W 4 HOH E 49 250 186 HOH HOH . W 4 HOH E 50 251 187 HOH HOH . W 4 HOH E 51 252 188 HOH HOH . W 4 HOH E 52 253 189 HOH HOH . W 4 HOH E 53 254 190 HOH HOH . W 4 HOH E 54 255 191 HOH HOH . X 4 HOH F 1 195 195 HOH HOH . X 4 HOH F 2 196 139 HOH HOH . X 4 HOH F 3 197 140 HOH HOH . X 4 HOH F 4 198 141 HOH HOH . X 4 HOH F 5 199 142 HOH HOH . X 4 HOH F 6 200 143 HOH HOH . X 4 HOH F 7 201 144 HOH HOH . X 4 HOH F 8 202 145 HOH HOH . X 4 HOH F 9 203 146 HOH HOH . X 4 HOH F 10 204 147 HOH HOH . X 4 HOH F 11 205 148 HOH HOH . X 4 HOH F 12 206 149 HOH HOH . X 4 HOH F 13 207 150 HOH HOH . X 4 HOH F 14 208 151 HOH HOH . X 4 HOH F 15 209 152 HOH HOH . X 4 HOH F 16 210 153 HOH HOH . X 4 HOH F 17 211 154 HOH HOH . X 4 HOH F 18 212 155 HOH HOH . X 4 HOH F 19 213 156 HOH HOH . X 4 HOH F 20 214 157 HOH HOH . X 4 HOH F 21 215 158 HOH HOH . X 4 HOH F 22 216 159 HOH HOH . X 4 HOH F 23 217 160 HOH HOH . X 4 HOH F 24 218 161 HOH HOH . X 4 HOH F 25 219 162 HOH HOH . X 4 HOH F 26 220 163 HOH HOH . X 4 HOH F 27 221 164 HOH HOH . X 4 HOH F 28 222 165 HOH HOH . X 4 HOH F 29 223 166 HOH HOH . X 4 HOH F 30 224 167 HOH HOH . X 4 HOH F 31 225 168 HOH HOH . X 4 HOH F 32 226 169 HOH HOH . X 4 HOH F 33 227 170 HOH HOH . X 4 HOH F 34 228 171 HOH HOH . X 4 HOH F 35 229 172 HOH HOH . X 4 HOH F 36 230 173 HOH HOH . X 4 HOH F 37 231 174 HOH HOH . X 4 HOH F 38 232 175 HOH HOH . X 4 HOH F 39 233 176 HOH HOH . X 4 HOH F 40 234 177 HOH HOH . X 4 HOH F 41 235 178 HOH HOH . X 4 HOH F 42 236 179 HOH HOH . X 4 HOH F 43 237 180 HOH HOH . X 4 HOH F 44 238 181 HOH HOH . X 4 HOH F 45 239 182 HOH HOH . X 4 HOH F 46 240 183 HOH HOH . X 4 HOH F 47 241 184 HOH HOH . X 4 HOH F 48 242 185 HOH HOH . X 4 HOH F 49 243 186 HOH HOH . X 4 HOH F 50 244 187 HOH HOH . X 4 HOH F 51 245 188 HOH HOH . X 4 HOH F 52 246 189 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 2 _atom_site.Cartn_x 72.442 _atom_site.Cartn_y 33.174 _atom_site.Cartn_z 67.142 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 138 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 438 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #