data_3B6L # _model_server_result.job_id WWvsybX2cuZxA-0rMldJow _model_server_result.datetime_utc '2025-07-01 20:16:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b6l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2300}' # _entry.id 3B6L # _exptl.entry_id 3B6L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 266.397 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECYL SULFATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3B6L _cell.length_a 77.595 _cell.length_b 77.595 _cell.length_c 37.567 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B6L _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 2006 1_555 A SG CYS 145 A CYS 2127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 48 A CYS 2030 1_555 A SG CYS 133 A CYS 2115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf3 A SG CYS 82 A CYS 2064 1_555 A SG CYS 98 A CYS 2080 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 A SG CYS 94 A CYS 2076 1_555 A SG CYS 112 A CYS 2094 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? # _chem_comp.formula 'C12 H26 O4 S' _chem_comp.formula_weight 266.397 _chem_comp.id SDS _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECYL SULFATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1S SDS doub 277 n n S O2S SDS sing 278 n n S O3S SDS sing 279 n n S O4 SDS doub 280 n n O2S C1 SDS sing 281 n n O3S H3S SDS sing 282 n n C1 C12 SDS sing 283 n n C1 H1C1 SDS sing 284 n n C1 H1C2 SDS sing 285 n n C2 C3 SDS sing 286 n n C2 H2C1 SDS sing 287 n n C2 H2C2 SDS sing 288 n n C2 H2C3 SDS sing 289 n n C3 C4 SDS sing 290 n n C3 H3C1 SDS sing 291 n n C3 H3C2 SDS sing 292 n n C4 C5 SDS sing 293 n n C4 H4C1 SDS sing 294 n n C4 H4C2 SDS sing 295 n n C5 C6 SDS sing 296 n n C5 H5C1 SDS sing 297 n n C5 H5C2 SDS sing 298 n n C6 C7 SDS sing 299 n n C6 H6C1 SDS sing 300 n n C6 H6C2 SDS sing 301 n n C7 C8 SDS sing 302 n n C7 H7C1 SDS sing 303 n n C7 H7C2 SDS sing 304 n n C8 C9 SDS sing 305 n n C8 H8C1 SDS sing 306 n n C8 H8C2 SDS sing 307 n n C9 C10 SDS sing 308 n n C9 H9C1 SDS sing 309 n n C9 H9C2 SDS sing 310 n n C10 C11 SDS sing 311 n n C10 H101 SDS sing 312 n n C10 H102 SDS sing 313 n n C11 C12 SDS sing 314 n n C11 H111 SDS sing 315 n n C11 H112 SDS sing 316 n n C12 H121 SDS sing 317 n n C12 H122 SDS sing 318 n n # _atom_sites.entry_id 3B6L _atom_sites.fract_transf_matrix[1][1] 0.012887 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012887 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SDS A 1 2300 2300 SDS SDS . C 3 HOH A 1 4001 4001 HOH HOH . C 3 HOH A 2 4002 4002 HOH HOH . C 3 HOH A 3 4003 4003 HOH HOH . C 3 HOH A 4 4004 4004 HOH HOH . C 3 HOH A 5 4005 4005 HOH HOH . C 3 HOH A 6 4006 4006 HOH HOH . C 3 HOH A 7 4007 4007 HOH HOH . C 3 HOH A 8 4008 4008 HOH HOH . C 3 HOH A 9 4009 4009 HOH HOH . C 3 HOH A 10 4010 4010 HOH HOH . C 3 HOH A 11 4011 4011 HOH HOH . C 3 HOH A 12 4012 4012 HOH HOH . C 3 HOH A 13 4013 4013 HOH HOH . C 3 HOH A 14 4014 4014 HOH HOH . C 3 HOH A 15 4015 4015 HOH HOH . C 3 HOH A 16 4016 4016 HOH HOH . C 3 HOH A 17 4017 4017 HOH HOH . C 3 HOH A 18 4018 4018 HOH HOH . C 3 HOH A 19 4019 4019 HOH HOH . C 3 HOH A 20 4020 4020 HOH HOH . C 3 HOH A 21 4021 4021 HOH HOH . C 3 HOH A 22 4022 4022 HOH HOH . C 3 HOH A 23 4023 4023 HOH HOH . C 3 HOH A 24 4024 4024 HOH HOH . C 3 HOH A 25 4025 4025 HOH HOH . C 3 HOH A 26 4026 4026 HOH HOH . C 3 HOH A 27 4027 4027 HOH HOH . C 3 HOH A 28 4028 4028 HOH HOH . C 3 HOH A 29 4029 4029 HOH HOH . C 3 HOH A 30 4030 4030 HOH HOH . C 3 HOH A 31 4032 4032 HOH HOH . C 3 HOH A 32 4034 4034 HOH HOH . C 3 HOH A 33 4035 4035 HOH HOH . C 3 HOH A 34 4036 4036 HOH HOH . C 3 HOH A 35 4037 4037 HOH HOH . C 3 HOH A 36 4038 4038 HOH HOH . C 3 HOH A 37 4039 4039 HOH HOH . C 3 HOH A 38 4040 4040 HOH HOH . C 3 HOH A 39 4041 4041 HOH HOH . C 3 HOH A 40 4042 4042 HOH HOH . C 3 HOH A 41 4043 4043 HOH HOH . C 3 HOH A 42 4044 4044 HOH HOH . C 3 HOH A 43 4045 4045 HOH HOH . C 3 HOH A 44 4046 4046 HOH HOH . C 3 HOH A 45 4047 4047 HOH HOH . C 3 HOH A 46 4048 4048 HOH HOH . C 3 HOH A 47 4050 4050 HOH HOH . C 3 HOH A 48 4051 4051 HOH HOH . C 3 HOH A 49 4052 4052 HOH HOH . C 3 HOH A 50 4053 4053 HOH HOH . C 3 HOH A 51 4054 4054 HOH HOH . C 3 HOH A 52 4055 4055 HOH HOH . C 3 HOH A 53 4057 4057 HOH HOH . C 3 HOH A 54 4058 4058 HOH HOH . C 3 HOH A 55 4059 4059 HOH HOH . C 3 HOH A 56 4060 4060 HOH HOH . C 3 HOH A 57 4061 4061 HOH HOH . C 3 HOH A 58 4062 4062 HOH HOH . C 3 HOH A 59 4063 4063 HOH HOH . C 3 HOH A 60 4064 4064 HOH HOH . C 3 HOH A 61 4065 4065 HOH HOH . C 3 HOH A 62 4066 4066 HOH HOH . C 3 HOH A 63 4068 4068 HOH HOH . C 3 HOH A 64 4069 4069 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SDS . . . B 2 26.541 40.035 64.995 1 80.59 ? S SDS 2300 A 1 HETATM 2 O O1S SDS . . . B 2 25.191 39.484 65.256 1 86.66 ? O1S SDS 2300 A 1 HETATM 3 O O2S SDS . . . B 2 26.49 41.576 64.725 1 73.15 ? O2S SDS 2300 A 1 HETATM 4 O O3S SDS . . . B 2 27.102 39.338 63.831 1 81.67 ? O3S SDS 2300 A 1 HETATM 5 O O4 SDS . . . B 2 27.373 39.773 66.197 1 86.75 ? O4 SDS 2300 A 1 HETATM 6 C C1 SDS . . . B 2 27.522 42.405 65.258 1 63.15 ? C1 SDS 2300 A 1 HETATM 7 C C2 SDS . . . B 2 27.66 52.106 62.154 1 31.85 ? C2 SDS 2300 A 1 HETATM 8 C C3 SDS . . . B 2 28.152 50.973 61.262 1 30.77 ? C3 SDS 2300 A 1 HETATM 9 C C4 SDS . . . B 2 27.186 49.829 61.002 1 28.32 ? C4 SDS 2300 A 1 HETATM 10 C C5 SDS . . . B 2 27.379 49.121 59.649 1 26.93 ? C5 SDS 2300 A 1 HETATM 11 C C6 SDS . . . B 2 26.4 48.045 59.146 1 21.11 ? C6 SDS 2300 A 1 HETATM 12 C C7 SDS . . . B 2 26.178 46.753 59.995 1 22.79 ? C7 SDS 2300 A 1 HETATM 13 C C8 SDS . . . B 2 26.759 46.68 61.426 1 15.16 ? C8 SDS 2300 A 1 HETATM 14 C C9 SDS . . . B 2 27.663 45.613 61.938 1 13.62 ? C9 SDS 2300 A 1 HETATM 15 C C10 SDS . . . B 2 28.039 45.643 63.41 1 25.97 ? C10 SDS 2300 A 1 HETATM 16 C C11 SDS . . . B 2 28.193 44.301 64.125 1 41.4 ? C11 SDS 2300 A 1 HETATM 17 C C12 SDS . . . B 2 27.096 43.87 65.102 1 51.17 ? C12 SDS 2300 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #