data_3B6M # _model_server_result.job_id ugj4f3RKaW4BS_AjNhNVww _model_server_result.datetime_utc '2024-11-23 20:46:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b6m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 3B6M # _exptl.entry_id 3B6M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIS-HYDROXYMETHYL-METHYL-AMMONIUM _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3B6M _cell.length_a 62.8 _cell.length_b 62.8 _cell.length_c 201.532 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B6M _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id 144 _chem_comp.mon_nstd_flag . _chem_comp.name TRIS-HYDROXYMETHYL-METHYL-AMMONIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N 144 sing 1 n n C1 H11 144 sing 2 n n C1 H12 144 sing 3 n n C1 H13 144 sing 4 n n N C2 144 sing 5 n n N C3 144 sing 6 n n N C4 144 sing 7 n n C2 O2 144 sing 8 n n C2 H21 144 sing 9 n n C2 H22 144 sing 10 n n O2 HO2 144 sing 11 n n C3 O3 144 sing 12 n n C3 H31 144 sing 13 n n C3 H32 144 sing 14 n n O3 HO3 144 sing 15 n n C4 O4 144 sing 16 n n C4 H41 144 sing 17 n n C4 H42 144 sing 18 n n O4 HO4 144 sing 19 n n # _atom_sites.entry_id 3B6M _atom_sites.fract_transf_matrix[1][1] 0.015924 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015924 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 200 200 FMN FMN . D 3 144 A 1 201 1 144 144 . E 4 15P A 1 202 1 15P 15P . F 2 FMN B 1 200 200 FMN FMN . G 3 144 B 1 201 2 144 144 . H 5 HOH A 1 203 1 HOH HOH . H 5 HOH A 2 204 3 HOH HOH . H 5 HOH A 3 205 4 HOH HOH . H 5 HOH A 4 206 9 HOH HOH . H 5 HOH A 5 207 17 HOH HOH . H 5 HOH A 6 208 19 HOH HOH . H 5 HOH A 7 209 21 HOH HOH . H 5 HOH A 8 210 22 HOH HOH . H 5 HOH A 9 211 28 HOH HOH . H 5 HOH A 10 212 33 HOH HOH . H 5 HOH A 11 213 34 HOH HOH . H 5 HOH A 12 214 35 HOH HOH . H 5 HOH A 13 215 37 HOH HOH . H 5 HOH A 14 216 39 HOH HOH . H 5 HOH A 15 217 40 HOH HOH . H 5 HOH A 16 218 42 HOH HOH . H 5 HOH A 17 219 49 HOH HOH . H 5 HOH A 18 220 50 HOH HOH . H 5 HOH A 19 221 51 HOH HOH . H 5 HOH A 20 222 52 HOH HOH . H 5 HOH A 21 223 53 HOH HOH . H 5 HOH A 22 224 55 HOH HOH . H 5 HOH A 23 225 57 HOH HOH . H 5 HOH A 24 226 58 HOH HOH . H 5 HOH A 25 227 61 HOH HOH . H 5 HOH A 26 228 63 HOH HOH . H 5 HOH A 27 229 64 HOH HOH . H 5 HOH A 28 230 69 HOH HOH . H 5 HOH A 29 231 72 HOH HOH . H 5 HOH A 30 232 73 HOH HOH . H 5 HOH A 31 233 75 HOH HOH . H 5 HOH A 32 234 76 HOH HOH . H 5 HOH A 33 235 79 HOH HOH . H 5 HOH A 34 236 80 HOH HOH . H 5 HOH A 35 237 81 HOH HOH . H 5 HOH A 36 238 85 HOH HOH . H 5 HOH A 37 239 88 HOH HOH . H 5 HOH A 38 240 93 HOH HOH . H 5 HOH A 39 241 95 HOH HOH . H 5 HOH A 40 243 98 HOH HOH . H 5 HOH A 41 244 99 HOH HOH . H 5 HOH A 42 245 101 HOH HOH . H 5 HOH A 43 246 102 HOH HOH . H 5 HOH A 44 247 103 HOH HOH . H 5 HOH A 45 248 109 HOH HOH . H 5 HOH A 46 249 125 HOH HOH . H 5 HOH A 47 250 126 HOH HOH . H 5 HOH A 48 251 133 HOH HOH . H 5 HOH A 49 252 134 HOH HOH . H 5 HOH A 50 253 135 HOH HOH . H 5 HOH A 51 254 138 HOH HOH . H 5 HOH A 52 255 139 HOH HOH . H 5 HOH A 53 256 140 HOH HOH . H 5 HOH A 54 257 141 HOH HOH . H 5 HOH A 55 258 142 HOH HOH . H 5 HOH A 56 259 143 HOH HOH . H 5 HOH A 57 260 144 HOH HOH . H 5 HOH A 58 261 145 HOH HOH . H 5 HOH A 59 262 146 HOH HOH . H 5 HOH A 60 263 147 HOH HOH . H 5 HOH A 61 264 148 HOH HOH . H 5 HOH A 62 265 149 HOH HOH . H 5 HOH A 63 266 150 HOH HOH . H 5 HOH A 64 267 151 HOH HOH . H 5 HOH A 65 268 152 HOH HOH . H 5 HOH A 66 269 153 HOH HOH . H 5 HOH A 67 270 154 HOH HOH . H 5 HOH A 68 271 155 HOH HOH . H 5 HOH A 69 272 156 HOH HOH . H 5 HOH A 70 273 157 HOH HOH . H 5 HOH A 71 274 158 HOH HOH . H 5 HOH A 72 275 159 HOH HOH . H 5 HOH A 73 276 160 HOH HOH . H 5 HOH A 74 277 161 HOH HOH . H 5 HOH A 75 278 162 HOH HOH . H 5 HOH A 76 279 163 HOH HOH . H 5 HOH A 77 280 164 HOH HOH . H 5 HOH A 78 281 165 HOH HOH . H 5 HOH A 79 282 166 HOH HOH . H 5 HOH A 80 283 167 HOH HOH . H 5 HOH A 81 284 168 HOH HOH . H 5 HOH A 82 285 169 HOH HOH . H 5 HOH A 83 286 170 HOH HOH . H 5 HOH A 84 288 187 HOH HOH . H 5 HOH A 85 289 188 HOH HOH . H 5 HOH A 86 290 189 HOH HOH . H 5 HOH A 87 291 190 HOH HOH . H 5 HOH A 88 292 191 HOH HOH . H 5 HOH A 89 293 192 HOH HOH . I 5 HOH B 1 242 96 HOH HOH . I 5 HOH B 2 243 186 HOH HOH . I 5 HOH B 3 244 2 HOH HOH . I 5 HOH B 4 245 5 HOH HOH . I 5 HOH B 5 246 6 HOH HOH . I 5 HOH B 6 247 7 HOH HOH . I 5 HOH B 7 248 8 HOH HOH . I 5 HOH B 8 249 10 HOH HOH . I 5 HOH B 9 250 11 HOH HOH . I 5 HOH B 10 251 12 HOH HOH . I 5 HOH B 11 252 13 HOH HOH . I 5 HOH B 12 253 14 HOH HOH . I 5 HOH B 13 254 15 HOH HOH . I 5 HOH B 14 255 16 HOH HOH . I 5 HOH B 15 256 18 HOH HOH . I 5 HOH B 16 257 20 HOH HOH . I 5 HOH B 17 258 23 HOH HOH . I 5 HOH B 18 259 24 HOH HOH . I 5 HOH B 19 260 25 HOH HOH . I 5 HOH B 20 261 26 HOH HOH . I 5 HOH B 21 262 27 HOH HOH . I 5 HOH B 22 263 29 HOH HOH . I 5 HOH B 23 264 30 HOH HOH . I 5 HOH B 24 265 31 HOH HOH . I 5 HOH B 25 266 32 HOH HOH . I 5 HOH B 26 267 36 HOH HOH . I 5 HOH B 27 268 38 HOH HOH . I 5 HOH B 28 269 41 HOH HOH . I 5 HOH B 29 270 43 HOH HOH . I 5 HOH B 30 271 44 HOH HOH . I 5 HOH B 31 272 45 HOH HOH . I 5 HOH B 32 273 46 HOH HOH . I 5 HOH B 33 274 47 HOH HOH . I 5 HOH B 34 275 48 HOH HOH . I 5 HOH B 35 276 54 HOH HOH . I 5 HOH B 36 277 56 HOH HOH . I 5 HOH B 37 278 59 HOH HOH . I 5 HOH B 38 279 60 HOH HOH . I 5 HOH B 39 280 62 HOH HOH . I 5 HOH B 40 281 65 HOH HOH . I 5 HOH B 41 282 66 HOH HOH . I 5 HOH B 42 283 67 HOH HOH . I 5 HOH B 43 284 68 HOH HOH . I 5 HOH B 44 285 70 HOH HOH . I 5 HOH B 45 286 71 HOH HOH . I 5 HOH B 46 287 74 HOH HOH . I 5 HOH B 47 288 77 HOH HOH . I 5 HOH B 48 289 78 HOH HOH . I 5 HOH B 49 290 82 HOH HOH . I 5 HOH B 50 291 83 HOH HOH . I 5 HOH B 51 292 84 HOH HOH . I 5 HOH B 52 293 86 HOH HOH . I 5 HOH B 53 294 87 HOH HOH . I 5 HOH B 54 295 89 HOH HOH . I 5 HOH B 55 296 90 HOH HOH . I 5 HOH B 56 297 91 HOH HOH . I 5 HOH B 57 298 92 HOH HOH . I 5 HOH B 58 299 94 HOH HOH . I 5 HOH B 59 300 97 HOH HOH . I 5 HOH B 60 301 100 HOH HOH . I 5 HOH B 61 302 104 HOH HOH . I 5 HOH B 62 303 105 HOH HOH . I 5 HOH B 63 304 106 HOH HOH . I 5 HOH B 64 305 107 HOH HOH . I 5 HOH B 65 306 108 HOH HOH . I 5 HOH B 66 307 110 HOH HOH . I 5 HOH B 67 308 111 HOH HOH . I 5 HOH B 68 309 112 HOH HOH . I 5 HOH B 69 310 113 HOH HOH . I 5 HOH B 70 311 114 HOH HOH . I 5 HOH B 71 312 115 HOH HOH . I 5 HOH B 72 313 116 HOH HOH . I 5 HOH B 73 314 117 HOH HOH . I 5 HOH B 74 315 118 HOH HOH . I 5 HOH B 75 316 119 HOH HOH . I 5 HOH B 76 317 120 HOH HOH . I 5 HOH B 77 318 121 HOH HOH . I 5 HOH B 78 319 122 HOH HOH . I 5 HOH B 79 320 123 HOH HOH . I 5 HOH B 80 321 124 HOH HOH . I 5 HOH B 81 322 127 HOH HOH . I 5 HOH B 82 323 128 HOH HOH . I 5 HOH B 83 324 129 HOH HOH . I 5 HOH B 84 325 130 HOH HOH . I 5 HOH B 85 326 131 HOH HOH . I 5 HOH B 86 327 132 HOH HOH . I 5 HOH B 87 328 136 HOH HOH . I 5 HOH B 88 329 137 HOH HOH . I 5 HOH B 89 330 171 HOH HOH . I 5 HOH B 90 331 172 HOH HOH . I 5 HOH B 91 332 173 HOH HOH . I 5 HOH B 92 333 174 HOH HOH . I 5 HOH B 93 334 175 HOH HOH . I 5 HOH B 94 335 176 HOH HOH . I 5 HOH B 95 336 177 HOH HOH . I 5 HOH B 96 337 178 HOH HOH . I 5 HOH B 97 338 179 HOH HOH . I 5 HOH B 98 339 180 HOH HOH . I 5 HOH B 99 340 181 HOH HOH . I 5 HOH B 100 341 182 HOH HOH . I 5 HOH B 101 342 183 HOH HOH . I 5 HOH B 102 343 184 HOH HOH . I 5 HOH B 103 344 185 HOH HOH . I 5 HOH B 104 345 193 HOH HOH . I 5 HOH B 105 346 194 HOH HOH . I 5 HOH B 106 347 195 HOH HOH . I 5 HOH B 107 348 196 HOH HOH . I 5 HOH B 108 349 197 HOH HOH . I 5 HOH B 109 350 198 HOH HOH . I 5 HOH B 110 351 199 HOH HOH . I 5 HOH B 111 352 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 144 . . . D 3 22.103 4.838 10.803 1 57.2 ? C1 144 201 A 1 HETATM 2 N N 144 . . . D 3 22.602 5.591 9.619 1 53.5 ? N 144 201 A 1 HETATM 3 C C2 144 . . . D 3 23.977 5.154 9.263 1 49.47 ? C2 144 201 A 1 HETATM 4 O O2 144 . . . D 3 23.964 4.479 7.976 1 45.76 ? O2 144 201 A 1 HETATM 5 C C3 144 . . . D 3 21.716 5.389 8.438 1 53.47 ? C3 144 201 A 1 HETATM 6 O O3 144 . . . D 3 20.777 4.286 8.357 1 51.97 ? O3 144 201 A 1 HETATM 7 C C4 144 . . . D 3 22.621 7.037 9.973 1 56.01 ? C4 144 201 A 1 HETATM 8 O O4 144 . . . D 3 22.379 7.349 11.376 1 59.17 ? O4 144 201 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 214 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #