data_3B70 # _model_server_result.job_id q8oK1zj8-fdbzTzxVa64RA _model_server_result.datetime_utc '2024-11-04 23:09:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b70 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":373}' # _entry.id 3B70 # _exptl.entry_id 3B70 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.13 _cell.angle_gamma 90 _cell.entry_id 3B70 _cell.length_a 42.379 _cell.length_b 44.578 _cell.length_c 92.927 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B70 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3B70 _atom_sites.fract_transf_matrix[1][1] 0.023597 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005073 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022433 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011007 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 372 1 NAP NAP . C 3 GOL A 1 373 1 GOL GOL . D 4 HOH A 1 374 1 HOH HOH . D 4 HOH A 2 375 2 HOH HOH . D 4 HOH A 3 376 3 HOH HOH . D 4 HOH A 4 377 4 HOH HOH . D 4 HOH A 5 378 5 HOH HOH . D 4 HOH A 6 379 6 HOH HOH . D 4 HOH A 7 380 7 HOH HOH . D 4 HOH A 8 381 8 HOH HOH . D 4 HOH A 9 382 9 HOH HOH . D 4 HOH A 10 383 10 HOH HOH . D 4 HOH A 11 384 11 HOH HOH . D 4 HOH A 12 385 12 HOH HOH . D 4 HOH A 13 386 13 HOH HOH . D 4 HOH A 14 387 14 HOH HOH . D 4 HOH A 15 388 15 HOH HOH . D 4 HOH A 16 389 16 HOH HOH . D 4 HOH A 17 390 17 HOH HOH . D 4 HOH A 18 391 18 HOH HOH . D 4 HOH A 19 392 19 HOH HOH . D 4 HOH A 20 393 20 HOH HOH . D 4 HOH A 21 394 21 HOH HOH . D 4 HOH A 22 395 22 HOH HOH . D 4 HOH A 23 396 23 HOH HOH . D 4 HOH A 24 397 24 HOH HOH . D 4 HOH A 25 398 25 HOH HOH . D 4 HOH A 26 399 26 HOH HOH . D 4 HOH A 27 400 27 HOH HOH . D 4 HOH A 28 401 28 HOH HOH . D 4 HOH A 29 402 29 HOH HOH . D 4 HOH A 30 403 30 HOH HOH . D 4 HOH A 31 404 31 HOH HOH . D 4 HOH A 32 405 32 HOH HOH . D 4 HOH A 33 406 33 HOH HOH . D 4 HOH A 34 407 34 HOH HOH . D 4 HOH A 35 408 35 HOH HOH . D 4 HOH A 36 409 36 HOH HOH . D 4 HOH A 37 410 37 HOH HOH . D 4 HOH A 38 411 38 HOH HOH . D 4 HOH A 39 412 39 HOH HOH . D 4 HOH A 40 413 40 HOH HOH . D 4 HOH A 41 414 41 HOH HOH . D 4 HOH A 42 415 42 HOH HOH . D 4 HOH A 43 416 43 HOH HOH . D 4 HOH A 44 417 44 HOH HOH . D 4 HOH A 45 418 45 HOH HOH . D 4 HOH A 46 419 46 HOH HOH . D 4 HOH A 47 420 47 HOH HOH . D 4 HOH A 48 421 48 HOH HOH . D 4 HOH A 49 422 49 HOH HOH . D 4 HOH A 50 423 50 HOH HOH . D 4 HOH A 51 424 51 HOH HOH . D 4 HOH A 52 425 52 HOH HOH . D 4 HOH A 53 426 53 HOH HOH . D 4 HOH A 54 427 54 HOH HOH . D 4 HOH A 55 428 55 HOH HOH . D 4 HOH A 56 429 56 HOH HOH . D 4 HOH A 57 430 57 HOH HOH . D 4 HOH A 58 431 58 HOH HOH . D 4 HOH A 59 432 59 HOH HOH . D 4 HOH A 60 433 60 HOH HOH . D 4 HOH A 61 434 61 HOH HOH . D 4 HOH A 62 435 62 HOH HOH . D 4 HOH A 63 436 63 HOH HOH . D 4 HOH A 64 437 64 HOH HOH . D 4 HOH A 65 438 65 HOH HOH . D 4 HOH A 66 439 66 HOH HOH . D 4 HOH A 67 440 67 HOH HOH . D 4 HOH A 68 441 68 HOH HOH . D 4 HOH A 69 442 69 HOH HOH . D 4 HOH A 70 443 70 HOH HOH . D 4 HOH A 71 444 71 HOH HOH . D 4 HOH A 72 445 72 HOH HOH . D 4 HOH A 73 446 73 HOH HOH . D 4 HOH A 74 447 74 HOH HOH . D 4 HOH A 75 448 75 HOH HOH . D 4 HOH A 76 449 76 HOH HOH . D 4 HOH A 77 450 77 HOH HOH . D 4 HOH A 78 451 78 HOH HOH . D 4 HOH A 79 452 79 HOH HOH . D 4 HOH A 80 453 80 HOH HOH . D 4 HOH A 81 454 81 HOH HOH . D 4 HOH A 82 455 82 HOH HOH . D 4 HOH A 83 456 83 HOH HOH . D 4 HOH A 84 457 84 HOH HOH . D 4 HOH A 85 458 85 HOH HOH . D 4 HOH A 86 459 86 HOH HOH . D 4 HOH A 87 460 87 HOH HOH . D 4 HOH A 88 461 88 HOH HOH . D 4 HOH A 89 462 89 HOH HOH . D 4 HOH A 90 463 90 HOH HOH . D 4 HOH A 91 464 91 HOH HOH . D 4 HOH A 92 465 92 HOH HOH . D 4 HOH A 93 466 93 HOH HOH . D 4 HOH A 94 467 94 HOH HOH . D 4 HOH A 95 468 95 HOH HOH . D 4 HOH A 96 469 96 HOH HOH . D 4 HOH A 97 470 97 HOH HOH . D 4 HOH A 98 471 98 HOH HOH . D 4 HOH A 99 472 99 HOH HOH . D 4 HOH A 100 473 100 HOH HOH . D 4 HOH A 101 474 101 HOH HOH . D 4 HOH A 102 475 102 HOH HOH . D 4 HOH A 103 476 103 HOH HOH . D 4 HOH A 104 477 104 HOH HOH . D 4 HOH A 105 478 105 HOH HOH . D 4 HOH A 106 479 106 HOH HOH . D 4 HOH A 107 480 107 HOH HOH . D 4 HOH A 108 481 108 HOH HOH . D 4 HOH A 109 482 109 HOH HOH . D 4 HOH A 110 483 110 HOH HOH . D 4 HOH A 111 484 111 HOH HOH . D 4 HOH A 112 485 112 HOH HOH . D 4 HOH A 113 486 113 HOH HOH . D 4 HOH A 114 487 114 HOH HOH . D 4 HOH A 115 488 115 HOH HOH . D 4 HOH A 116 489 116 HOH HOH . D 4 HOH A 117 490 117 HOH HOH . D 4 HOH A 118 491 118 HOH HOH . D 4 HOH A 119 492 119 HOH HOH . D 4 HOH A 120 493 120 HOH HOH . D 4 HOH A 121 494 121 HOH HOH . D 4 HOH A 122 495 122 HOH HOH . D 4 HOH A 123 496 123 HOH HOH . D 4 HOH A 124 497 124 HOH HOH . D 4 HOH A 125 498 125 HOH HOH . D 4 HOH A 126 499 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 44.38 -13.174 77.363 1 44.49 ? C1 GOL 373 A 1 HETATM 2 O O1 GOL . . . C 3 44.868 -14.497 77.473 1 42.21 ? O1 GOL 373 A 1 HETATM 3 C C2 GOL . . . C 3 43.363 -12.956 76.228 1 43.4 ? C2 GOL 373 A 1 HETATM 4 O O2 GOL . . . C 3 42.106 -13.532 76.535 1 44.64 ? O2 GOL 373 A 1 HETATM 5 C C3 GOL . . . C 3 43.874 -13.349 74.826 1 42.04 ? C3 GOL 373 A 1 HETATM 6 O O3 GOL . . . C 3 42.941 -13.029 73.784 1 36.13 ? O3 GOL 373 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #