data_3B7Y # _model_server_result.job_id ZVK0xhzk_m_Oq9KqIzud3w _model_server_result.datetime_utc '2024-11-26 10:12:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b7y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 3B7Y # _exptl.entry_id 3B7Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 108.89 _cell.angle_beta 111.11 _cell.angle_gamma 100.86 _cell.entry_id 3B7Y _cell.length_a 38.778 _cell.length_b 47.997 _cell.length_c 50.786 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B7Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 42 A ASP 141 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc2 A O GLU 95 A GLU 194 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc3 A O ASN 96 A ASN 195 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc4 A OD1 ASN 96 A ASN 195 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc5 A O THR 99 A THR 198 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc6 A OD1 ASP 101 A ASP 200 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3B7Y _atom_sites.fract_transf_matrix[1][1] 0.025788 _atom_sites.fract_transf_matrix[1][2] 0.004945 _atom_sites.fract_transf_matrix[1][3] 0.01335 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021214 _atom_sites.fract_transf_matrix[2][3] 0.010029 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023347 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 301 1000 CA CA . D 2 CA A 1 302 1001 CA CA . E 3 HOH A 1 303 4 HOH HOH . E 3 HOH A 2 304 7 HOH HOH . E 3 HOH A 3 305 8 HOH HOH . E 3 HOH A 4 306 16 HOH HOH . E 3 HOH A 5 307 18 HOH HOH . E 3 HOH A 6 308 21 HOH HOH . E 3 HOH A 7 309 27 HOH HOH . E 3 HOH A 8 310 28 HOH HOH . E 3 HOH A 9 311 29 HOH HOH . E 3 HOH A 10 312 32 HOH HOH . E 3 HOH A 11 313 33 HOH HOH . E 3 HOH A 12 314 34 HOH HOH . E 3 HOH A 13 315 36 HOH HOH . E 3 HOH A 14 316 37 HOH HOH . E 3 HOH A 15 317 40 HOH HOH . E 3 HOH A 16 318 43 HOH HOH . E 3 HOH A 17 319 45 HOH HOH . E 3 HOH A 18 320 47 HOH HOH . E 3 HOH A 19 321 49 HOH HOH . E 3 HOH A 20 322 51 HOH HOH . E 3 HOH A 21 323 54 HOH HOH . E 3 HOH A 22 324 55 HOH HOH . E 3 HOH A 23 325 56 HOH HOH . E 3 HOH A 24 326 61 HOH HOH . E 3 HOH A 25 327 62 HOH HOH . E 3 HOH A 26 328 68 HOH HOH . E 3 HOH A 27 329 73 HOH HOH . E 3 HOH A 28 330 77 HOH HOH . E 3 HOH A 29 331 80 HOH HOH . E 3 HOH A 30 332 82 HOH HOH . E 3 HOH A 31 333 84 HOH HOH . E 3 HOH A 32 334 85 HOH HOH . E 3 HOH A 33 335 89 HOH HOH . E 3 HOH A 34 336 90 HOH HOH . E 3 HOH A 35 337 92 HOH HOH . E 3 HOH A 36 338 94 HOH HOH . E 3 HOH A 37 339 97 HOH HOH . E 3 HOH A 38 340 98 HOH HOH . E 3 HOH A 39 341 99 HOH HOH . E 3 HOH A 40 342 105 HOH HOH . E 3 HOH A 41 343 108 HOH HOH . E 3 HOH A 42 344 112 HOH HOH . E 3 HOH A 43 345 113 HOH HOH . E 3 HOH A 44 346 114 HOH HOH . E 3 HOH A 45 347 115 HOH HOH . E 3 HOH A 46 348 116 HOH HOH . E 3 HOH A 47 349 120 HOH HOH . E 3 HOH A 48 350 121 HOH HOH . E 3 HOH A 49 351 127 HOH HOH . E 3 HOH A 50 352 129 HOH HOH . E 3 HOH A 51 353 130 HOH HOH . E 3 HOH A 52 354 136 HOH HOH . E 3 HOH A 53 355 139 HOH HOH . E 3 HOH A 54 356 141 HOH HOH . E 3 HOH A 55 357 145 HOH HOH . E 3 HOH A 56 358 147 HOH HOH . E 3 HOH A 57 359 149 HOH HOH . E 3 HOH A 58 360 150 HOH HOH . E 3 HOH A 59 361 151 HOH HOH . E 3 HOH A 60 362 155 HOH HOH . E 3 HOH A 61 363 156 HOH HOH . E 3 HOH A 62 364 159 HOH HOH . E 3 HOH A 63 365 160 HOH HOH . E 3 HOH A 64 366 162 HOH HOH . E 3 HOH A 65 367 163 HOH HOH . E 3 HOH A 66 368 165 HOH HOH . E 3 HOH A 67 369 166 HOH HOH . E 3 HOH A 68 370 170 HOH HOH . E 3 HOH A 69 371 175 HOH HOH . E 3 HOH A 70 372 176 HOH HOH . E 3 HOH A 71 373 178 HOH HOH . E 3 HOH A 72 374 179 HOH HOH . E 3 HOH A 73 375 180 HOH HOH . E 3 HOH A 74 376 185 HOH HOH . E 3 HOH A 75 377 186 HOH HOH . E 3 HOH A 76 378 187 HOH HOH . E 3 HOH A 77 379 188 HOH HOH . E 3 HOH A 78 380 189 HOH HOH . E 3 HOH A 79 381 190 HOH HOH . E 3 HOH A 80 382 191 HOH HOH . E 3 HOH A 81 383 192 HOH HOH . E 3 HOH A 82 384 193 HOH HOH . E 3 HOH A 83 385 194 HOH HOH . E 3 HOH A 84 386 200 HOH HOH . E 3 HOH A 85 387 205 HOH HOH . E 3 HOH A 86 388 209 HOH HOH . E 3 HOH A 87 389 211 HOH HOH . E 3 HOH A 88 390 212 HOH HOH . E 3 HOH A 89 391 218 HOH HOH . F 3 HOH B 1 253 1 HOH HOH . F 3 HOH B 2 254 2 HOH HOH . F 3 HOH B 3 255 3 HOH HOH . F 3 HOH B 4 256 5 HOH HOH . F 3 HOH B 5 257 6 HOH HOH . F 3 HOH B 6 258 9 HOH HOH . F 3 HOH B 7 259 10 HOH HOH . F 3 HOH B 8 260 11 HOH HOH . F 3 HOH B 9 261 12 HOH HOH . F 3 HOH B 10 262 13 HOH HOH . F 3 HOH B 11 263 14 HOH HOH . F 3 HOH B 12 264 15 HOH HOH . F 3 HOH B 13 265 17 HOH HOH . F 3 HOH B 14 266 19 HOH HOH . F 3 HOH B 15 267 20 HOH HOH . F 3 HOH B 16 268 22 HOH HOH . F 3 HOH B 17 269 23 HOH HOH . F 3 HOH B 18 270 24 HOH HOH . F 3 HOH B 19 271 25 HOH HOH . F 3 HOH B 20 272 26 HOH HOH . F 3 HOH B 21 273 30 HOH HOH . F 3 HOH B 22 274 31 HOH HOH . F 3 HOH B 23 275 35 HOH HOH . F 3 HOH B 24 276 38 HOH HOH . F 3 HOH B 25 277 39 HOH HOH . F 3 HOH B 26 278 41 HOH HOH . F 3 HOH B 27 279 42 HOH HOH . F 3 HOH B 28 280 44 HOH HOH . F 3 HOH B 29 281 46 HOH HOH . F 3 HOH B 30 282 48 HOH HOH . F 3 HOH B 31 283 50 HOH HOH . F 3 HOH B 32 284 52 HOH HOH . F 3 HOH B 33 285 53 HOH HOH . F 3 HOH B 34 286 57 HOH HOH . F 3 HOH B 35 287 58 HOH HOH . F 3 HOH B 36 288 59 HOH HOH . F 3 HOH B 37 289 60 HOH HOH . F 3 HOH B 38 290 63 HOH HOH . F 3 HOH B 39 291 64 HOH HOH . F 3 HOH B 40 292 65 HOH HOH . F 3 HOH B 41 293 66 HOH HOH . F 3 HOH B 42 294 67 HOH HOH . F 3 HOH B 43 295 69 HOH HOH . F 3 HOH B 44 296 70 HOH HOH . F 3 HOH B 45 297 71 HOH HOH . F 3 HOH B 46 298 72 HOH HOH . F 3 HOH B 47 299 74 HOH HOH . F 3 HOH B 48 300 75 HOH HOH . F 3 HOH B 49 301 76 HOH HOH . F 3 HOH B 50 302 78 HOH HOH . F 3 HOH B 51 303 79 HOH HOH . F 3 HOH B 52 304 81 HOH HOH . F 3 HOH B 53 305 83 HOH HOH . F 3 HOH B 54 306 86 HOH HOH . F 3 HOH B 55 307 87 HOH HOH . F 3 HOH B 56 308 88 HOH HOH . F 3 HOH B 57 309 91 HOH HOH . F 3 HOH B 58 310 93 HOH HOH . F 3 HOH B 59 311 95 HOH HOH . F 3 HOH B 60 312 96 HOH HOH . F 3 HOH B 61 313 100 HOH HOH . F 3 HOH B 62 314 101 HOH HOH . F 3 HOH B 63 315 102 HOH HOH . F 3 HOH B 64 316 103 HOH HOH . F 3 HOH B 65 317 104 HOH HOH . F 3 HOH B 66 318 106 HOH HOH . F 3 HOH B 67 319 107 HOH HOH . F 3 HOH B 68 320 109 HOH HOH . F 3 HOH B 69 321 110 HOH HOH . F 3 HOH B 70 322 111 HOH HOH . F 3 HOH B 71 323 117 HOH HOH . F 3 HOH B 72 324 118 HOH HOH . F 3 HOH B 73 325 119 HOH HOH . F 3 HOH B 74 326 122 HOH HOH . F 3 HOH B 75 327 123 HOH HOH . F 3 HOH B 76 328 124 HOH HOH . F 3 HOH B 77 329 125 HOH HOH . F 3 HOH B 78 330 126 HOH HOH . F 3 HOH B 79 331 128 HOH HOH . F 3 HOH B 80 332 131 HOH HOH . F 3 HOH B 81 333 132 HOH HOH . F 3 HOH B 82 334 133 HOH HOH . F 3 HOH B 83 335 134 HOH HOH . F 3 HOH B 84 336 135 HOH HOH . F 3 HOH B 85 337 137 HOH HOH . F 3 HOH B 86 338 138 HOH HOH . F 3 HOH B 87 339 140 HOH HOH . F 3 HOH B 88 340 142 HOH HOH . F 3 HOH B 89 341 143 HOH HOH . F 3 HOH B 90 342 144 HOH HOH . F 3 HOH B 91 343 146 HOH HOH . F 3 HOH B 92 344 148 HOH HOH . F 3 HOH B 93 345 152 HOH HOH . F 3 HOH B 94 346 153 HOH HOH . F 3 HOH B 95 347 154 HOH HOH . F 3 HOH B 96 348 157 HOH HOH . F 3 HOH B 97 349 158 HOH HOH . F 3 HOH B 98 350 161 HOH HOH . F 3 HOH B 99 351 164 HOH HOH . F 3 HOH B 100 352 167 HOH HOH . F 3 HOH B 101 353 168 HOH HOH . F 3 HOH B 102 354 169 HOH HOH . F 3 HOH B 103 355 171 HOH HOH . F 3 HOH B 104 356 172 HOH HOH . F 3 HOH B 105 357 173 HOH HOH . F 3 HOH B 106 358 174 HOH HOH . F 3 HOH B 107 359 177 HOH HOH . F 3 HOH B 108 360 181 HOH HOH . F 3 HOH B 109 361 182 HOH HOH . F 3 HOH B 110 362 183 HOH HOH . F 3 HOH B 111 363 184 HOH HOH . F 3 HOH B 112 364 195 HOH HOH . F 3 HOH B 113 365 196 HOH HOH . F 3 HOH B 114 366 197 HOH HOH . F 3 HOH B 115 367 198 HOH HOH . F 3 HOH B 116 368 199 HOH HOH . F 3 HOH B 117 369 201 HOH HOH . F 3 HOH B 118 370 202 HOH HOH . F 3 HOH B 119 371 203 HOH HOH . F 3 HOH B 120 372 204 HOH HOH . F 3 HOH B 121 373 206 HOH HOH . F 3 HOH B 122 374 207 HOH HOH . F 3 HOH B 123 375 208 HOH HOH . F 3 HOH B 124 376 210 HOH HOH . F 3 HOH B 125 377 213 HOH HOH . F 3 HOH B 126 378 214 HOH HOH . F 3 HOH B 127 379 215 HOH HOH . F 3 HOH B 128 380 216 HOH HOH . F 3 HOH B 129 381 217 HOH HOH . F 3 HOH B 130 382 219 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -2.515 _atom_site.Cartn_y 16.052 _atom_site.Cartn_z 24.962 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 95.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #