data_3B84
#
_model_server_result.job_id            9ly9EUvn_c0QaL0_y0TYrg 
_model_server_result.datetime_utc      '2024-11-22 22:32:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3b84 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":902}' 
#
_entry.id    3B84 
#
_exptl.entry_id    3B84 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3B84 
_cell.length_a            50.375 
_cell.length_b            50.375 
_cell.length_c            86.093 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3B84 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 45 A CYS 46 1_555 B UNK UNX . A UNX 900 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.036 ? 
covale ? covale2 A SG CYS 45 A CYS 46 1_555 B UNK UNX . A UNX 900 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.001 ? 
covale ? covale3 A SG CYS 46 A CYS 47 1_555 C UNK UNX . A UNX 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3B84 
_atom_sites.fract_transf_matrix[1][1]    0.019851 
_atom_sites.fract_transf_matrix[1][2]    0.011461 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022922 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011615 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 UNX A 1 900 900 UNX UNK . 
C 2 UNX A 1 901 901 UNX UNK . 
D 3 EDO A 1 1 1 EDO EDO . 
E 3 EDO A 1 902 2 EDO EDO . 
F 4 HOH A 1 903 1 HOH HOH . 
F 4 HOH A 2 904 2 HOH HOH . 
F 4 HOH A 3 905 3 HOH HOH . 
F 4 HOH A 4 906 5 HOH HOH . 
F 4 HOH A 5 907 6 HOH HOH . 
F 4 HOH A 6 908 7 HOH HOH . 
F 4 HOH A 7 909 8 HOH HOH . 
F 4 HOH A 8 910 9 HOH HOH . 
F 4 HOH A 9 911 10 HOH HOH . 
F 4 HOH A 10 912 11 HOH HOH . 
F 4 HOH A 11 913 13 HOH HOH . 
F 4 HOH A 12 914 14 HOH HOH . 
F 4 HOH A 13 915 15 HOH HOH . 
F 4 HOH A 14 916 17 HOH HOH . 
F 4 HOH A 15 917 18 HOH HOH . 
F 4 HOH A 16 918 19 HOH HOH . 
F 4 HOH A 17 919 20 HOH HOH . 
F 4 HOH A 18 920 22 HOH HOH . 
F 4 HOH A 19 921 23 HOH HOH . 
F 4 HOH A 20 922 24 HOH HOH . 
F 4 HOH A 21 923 25 HOH HOH . 
F 4 HOH A 22 924 27 HOH HOH . 
F 4 HOH A 23 925 28 HOH HOH . 
F 4 HOH A 24 926 30 HOH HOH . 
F 4 HOH A 25 927 32 HOH HOH . 
F 4 HOH A 26 928 33 HOH HOH . 
F 4 HOH A 27 929 34 HOH HOH . 
F 4 HOH A 28 930 35 HOH HOH . 
F 4 HOH A 29 931 36 HOH HOH . 
F 4 HOH A 30 932 38 HOH HOH . 
F 4 HOH A 31 933 39 HOH HOH . 
F 4 HOH A 32 934 40 HOH HOH . 
F 4 HOH A 33 935 41 HOH HOH . 
F 4 HOH A 34 936 42 HOH HOH . 
F 4 HOH A 35 937 43 HOH HOH . 
F 4 HOH A 36 938 46 HOH HOH . 
F 4 HOH A 37 939 47 HOH HOH . 
F 4 HOH A 38 940 48 HOH HOH . 
F 4 HOH A 39 941 50 HOH HOH . 
F 4 HOH A 40 942 52 HOH HOH . 
F 4 HOH A 41 943 53 HOH HOH . 
F 4 HOH A 42 944 54 HOH HOH . 
F 4 HOH A 43 945 55 HOH HOH . 
F 4 HOH A 44 946 56 HOH HOH . 
F 4 HOH A 45 947 58 HOH HOH . 
F 4 HOH A 46 948 60 HOH HOH . 
F 4 HOH A 47 949 61 HOH HOH . 
F 4 HOH A 48 950 63 HOH HOH . 
F 4 HOH A 49 951 64 HOH HOH . 
F 4 HOH A 50 952 66 HOH HOH . 
F 4 HOH A 51 953 67 HOH HOH . 
F 4 HOH A 52 954 68 HOH HOH . 
F 4 HOH A 53 955 69 HOH HOH . 
F 4 HOH A 54 956 74 HOH HOH . 
F 4 HOH A 55 957 75 HOH HOH . 
F 4 HOH A 56 958 77 HOH HOH . 
F 4 HOH A 57 959 78 HOH HOH . 
F 4 HOH A 58 960 80 HOH HOH . 
F 4 HOH A 59 961 81 HOH HOH . 
F 4 HOH A 60 962 82 HOH HOH . 
F 4 HOH A 61 963 83 HOH HOH . 
F 4 HOH A 62 964 84 HOH HOH . 
F 4 HOH A 63 965 85 HOH HOH . 
F 4 HOH A 64 966 86 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 3 44.169 -0.15 8.405 1 64.24 ? C1 EDO 902 A 1 
HETATM 2 O O1 EDO . . . E 3 42.971 -0.81 7.965 1 60.4 ? O1 EDO 902 A 1 
HETATM 3 C C2 EDO . . . E 3 44.055 0.338 9.859 1 53.2 ? C2 EDO 902 A 1 
HETATM 4 O O2 EDO . . . E 3 43.203 -0.52 10.647 1 45.81 ? O2 EDO 902 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           253 
_model_server_stats.encode_time_ms          23 
_model_server_stats.element_count           4 
#