data_3B86 # _model_server_result.job_id -FiqlTQ30KF_kFJGCUPwvg _model_server_result.datetime_utc '2025-01-10 21:09:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b86 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":224}' # _entry.id 3B86 # _exptl.entry_id 3B86 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3B86 _cell.length_a 46.825 _cell.length_b 46.825 _cell.length_c 111.233 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B86 _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 17 A CYS 17 1_555 A SG CYS 50 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 46 A CYS 46 1_555 A SG CYS 103 A CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 A SG CYS 92 A CYS 92 1_555 A SG CYS 112 A CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 17 B CYS 17 1_555 B SG CYS 50 B CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.924 ? disulf ? disulf5 B SG CYS 46 B CYS 46 1_555 B SG CYS 103 B CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf6 B SG CYS 92 B CYS 92 1_555 B SG CYS 112 B CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 251 n n O1 HO1 PG4 sing 252 n n C1 C2 PG4 sing 253 n n C1 H11 PG4 sing 254 n n C1 H12 PG4 sing 255 n n C2 O2 PG4 sing 256 n n C2 H21 PG4 sing 257 n n C2 H22 PG4 sing 258 n n O2 C3 PG4 sing 259 n n C3 C4 PG4 sing 260 n n C3 H31 PG4 sing 261 n n C3 H32 PG4 sing 262 n n C4 O3 PG4 sing 263 n n C4 H41 PG4 sing 264 n n C4 H42 PG4 sing 265 n n O3 C5 PG4 sing 266 n n C5 C6 PG4 sing 267 n n C5 H51 PG4 sing 268 n n C5 H52 PG4 sing 269 n n C6 O4 PG4 sing 270 n n C6 H61 PG4 sing 271 n n C6 H62 PG4 sing 272 n n O4 C7 PG4 sing 273 n n C7 C8 PG4 sing 274 n n C7 H71 PG4 sing 275 n n C7 H72 PG4 sing 276 n n C8 O5 PG4 sing 277 n n C8 H81 PG4 sing 278 n n C8 H82 PG4 sing 279 n n O5 HO5 PG4 sing 280 n n # _atom_sites.entry_id 3B86 _atom_sites.fract_transf_matrix[1][1] 0.021356 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00899 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 403 403 ACT ACT . D 2 ACT A 1 405 405 ACT ACT . E 3 PG4 A 1 224 224 PG4 PG4 . F 4 EOH A 1 500 500 EOH EOH . G 2 ACT B 1 404 404 ACT ACT . H 2 ACT B 1 406 406 ACT ACT . I 3 PG4 B 1 224 224 PG4 PG4 . J 4 EOH B 1 501 501 EOH EOH . K 5 HOH A 1 501 1 HOH HOH . K 5 HOH A 2 502 2 HOH HOH . K 5 HOH A 3 503 5 HOH HOH . K 5 HOH A 4 504 8 HOH HOH . K 5 HOH A 5 505 12 HOH HOH . K 5 HOH A 6 506 13 HOH HOH . K 5 HOH A 7 507 14 HOH HOH . K 5 HOH A 8 508 15 HOH HOH . K 5 HOH A 9 509 17 HOH HOH . K 5 HOH A 10 510 19 HOH HOH . K 5 HOH A 11 511 25 HOH HOH . K 5 HOH A 12 512 26 HOH HOH . K 5 HOH A 13 513 27 HOH HOH . K 5 HOH A 14 514 32 HOH HOH . K 5 HOH A 15 515 33 HOH HOH . K 5 HOH A 16 516 37 HOH HOH . K 5 HOH A 17 517 38 HOH HOH . K 5 HOH A 18 519 41 HOH HOH . K 5 HOH A 19 520 51 HOH HOH . K 5 HOH A 20 521 53 HOH HOH . K 5 HOH A 21 522 54 HOH HOH . K 5 HOH A 22 523 56 HOH HOH . K 5 HOH A 23 524 57 HOH HOH . K 5 HOH A 24 525 58 HOH HOH . K 5 HOH A 25 526 61 HOH HOH . K 5 HOH A 26 527 63 HOH HOH . K 5 HOH A 27 528 64 HOH HOH . K 5 HOH A 28 529 65 HOH HOH . K 5 HOH A 29 530 66 HOH HOH . K 5 HOH A 30 531 68 HOH HOH . K 5 HOH A 31 533 74 HOH HOH . K 5 HOH A 32 535 87 HOH HOH . K 5 HOH A 33 536 91 HOH HOH . K 5 HOH A 34 537 93 HOH HOH . K 5 HOH A 35 538 94 HOH HOH . K 5 HOH A 36 539 95 HOH HOH . K 5 HOH A 37 540 96 HOH HOH . K 5 HOH A 38 541 97 HOH HOH . K 5 HOH A 39 542 101 HOH HOH . K 5 HOH A 40 543 106 HOH HOH . L 5 HOH B 1 518 40 HOH HOH . L 5 HOH B 2 519 69 HOH HOH . L 5 HOH B 3 520 75 HOH HOH . L 5 HOH B 4 521 3 HOH HOH . L 5 HOH B 5 522 4 HOH HOH . L 5 HOH B 6 523 6 HOH HOH . L 5 HOH B 7 524 7 HOH HOH . L 5 HOH B 8 525 9 HOH HOH . L 5 HOH B 9 526 10 HOH HOH . L 5 HOH B 10 527 11 HOH HOH . L 5 HOH B 11 528 18 HOH HOH . L 5 HOH B 12 529 20 HOH HOH . L 5 HOH B 13 530 21 HOH HOH . L 5 HOH B 14 531 22 HOH HOH . L 5 HOH B 15 532 23 HOH HOH . L 5 HOH B 16 533 24 HOH HOH . L 5 HOH B 17 534 28 HOH HOH . L 5 HOH B 18 535 29 HOH HOH . L 5 HOH B 19 536 30 HOH HOH . L 5 HOH B 20 537 31 HOH HOH . L 5 HOH B 21 538 34 HOH HOH . L 5 HOH B 22 539 35 HOH HOH . L 5 HOH B 23 540 36 HOH HOH . L 5 HOH B 24 541 39 HOH HOH . L 5 HOH B 25 542 42 HOH HOH . L 5 HOH B 26 543 43 HOH HOH . L 5 HOH B 27 544 44 HOH HOH . L 5 HOH B 28 545 45 HOH HOH . L 5 HOH B 29 546 46 HOH HOH . L 5 HOH B 30 547 47 HOH HOH . L 5 HOH B 31 548 48 HOH HOH . L 5 HOH B 32 549 49 HOH HOH . L 5 HOH B 33 550 50 HOH HOH . L 5 HOH B 34 551 52 HOH HOH . L 5 HOH B 35 552 55 HOH HOH . L 5 HOH B 36 553 59 HOH HOH . L 5 HOH B 37 554 60 HOH HOH . L 5 HOH B 38 555 62 HOH HOH . L 5 HOH B 39 556 70 HOH HOH . L 5 HOH B 40 557 71 HOH HOH . L 5 HOH B 41 558 72 HOH HOH . L 5 HOH B 42 559 73 HOH HOH . L 5 HOH B 43 560 76 HOH HOH . L 5 HOH B 44 561 77 HOH HOH . L 5 HOH B 45 562 78 HOH HOH . L 5 HOH B 46 563 83 HOH HOH . L 5 HOH B 47 564 88 HOH HOH . L 5 HOH B 48 565 99 HOH HOH . L 5 HOH B 49 566 107 HOH HOH . L 5 HOH B 50 567 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . E 3 45.142 5.215 5.031 1 66.35 ? O1 PG4 224 A 1 HETATM 2 C C1 PG4 . . . E 3 45.708 5.03 6.381 1 67.66 ? C1 PG4 224 A 1 HETATM 3 C C2 PG4 . . . E 3 44.62 4.179 7.16 1 69 ? C2 PG4 224 A 1 HETATM 4 O O2 PG4 . . . E 3 44.973 4.228 8.563 1 71.17 ? O2 PG4 224 A 1 HETATM 5 C C3 PG4 . . . E 3 44.16 3.325 9.315 1 71.45 ? C3 PG4 224 A 1 HETATM 6 C C4 PG4 . . . E 3 44.361 3.531 10.812 1 71.23 ? C4 PG4 224 A 1 HETATM 7 O O3 PG4 . . . E 3 43.283 2.912 11.511 1 72.28 ? O3 PG4 224 A 1 HETATM 8 C C5 PG4 . . . E 3 42.866 3.679 12.638 1 70.76 ? C5 PG4 224 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #