data_3B88
#
_model_server_result.job_id            F4iqlnK3S3KCdqiYnqQ6qg 
_model_server_result.datetime_utc      '2024-11-09 02:32:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3b88 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":224}' 
#
_entry.id    3B88 
#
_exptl.entry_id    3B88 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              208.252 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3B88 
_cell.length_a            65.118 
_cell.length_b            67.284 
_cell.length_c            110.523 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3B88 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 17 A CYS 17 1_555 A SG CYS 50 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
disulf ? disulf2 A SG CYS 46 A CYS 46 1_555 A SG CYS 103 A CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
disulf ? disulf3 A SG CYS 92 A CYS 92 1_555 A SG CYS 112 A CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf4 B SG CYS 17 B CYS 17 1_555 B SG CYS 50 B CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
disulf ? disulf5 B SG CYS 46 B CYS 46 1_555 B SG CYS 103 B CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf6 B SG CYS 92 B CYS 92 1_555 B SG CYS 112 B CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
#
_chem_comp.formula           'C9 H20 O5' 
_chem_comp.formula_weight    208.252 
_chem_comp.id                ETE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH2 C12 ETE sing 89 n n 
OH2 HO2 ETE sing 90 n n 
C12 C22 ETE sing 91 n n 
C12 H121 ETE sing 92 n n 
C12 H122 ETE sing 93 n n 
C22 OH3 ETE sing 94 n n 
C22 H221 ETE sing 95 n n 
C22 H222 ETE sing 96 n n 
OH3 C23 ETE sing 97 n n 
C13 C23 ETE sing 98 n n 
C13 OH4 ETE sing 99 n n 
C13 H131 ETE sing 100 n n 
C13 H132 ETE sing 101 n n 
C23 H231 ETE sing 102 n n 
C23 H232 ETE sing 103 n n 
OH4 C24 ETE sing 104 n n 
C14 C24 ETE sing 105 n n 
C14 OH5 ETE sing 106 n n 
C14 H141 ETE sing 107 n n 
C14 H142 ETE sing 108 n n 
C24 H241 ETE sing 109 n n 
C24 H242 ETE sing 110 n n 
OH5 C25 ETE sing 111 n n 
C15 C25 ETE sing 112 n n 
C15 OH6 ETE sing 113 n n 
C15 H151 ETE sing 114 n n 
C15 H152 ETE sing 115 n n 
C25 H251 ETE sing 116 n n 
C25 H252 ETE sing 117 n n 
OH6 C26 ETE sing 118 n n 
C26 H261 ETE sing 119 n n 
C26 H262 ETE sing 120 n n 
C26 H263 ETE sing 121 n n 
#
_atom_sites.entry_id                     3B88 
_atom_sites.fract_transf_matrix[1][1]    0.015357 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014862 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009048 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ACT A 1 702 702 ACT ACT . 
D 3 ETE A 1 224 224 ETE ETE . 
E 3 ETE B 1 225 225 ETE ETE . 
F 4 HOH A 1 274 115 HOH HOH . 
F 4 HOH A 2 703 2 HOH HOH . 
F 4 HOH A 3 704 3 HOH HOH . 
F 4 HOH A 4 705 5 HOH HOH . 
F 4 HOH A 5 706 6 HOH HOH . 
F 4 HOH A 6 707 7 HOH HOH . 
F 4 HOH A 7 708 8 HOH HOH . 
F 4 HOH A 8 709 10 HOH HOH . 
F 4 HOH A 9 710 11 HOH HOH . 
F 4 HOH A 10 711 14 HOH HOH . 
F 4 HOH A 11 712 16 HOH HOH . 
F 4 HOH A 12 713 19 HOH HOH . 
F 4 HOH A 13 714 21 HOH HOH . 
F 4 HOH A 14 715 23 HOH HOH . 
F 4 HOH A 15 716 24 HOH HOH . 
F 4 HOH A 16 717 25 HOH HOH . 
F 4 HOH A 17 718 26 HOH HOH . 
F 4 HOH A 18 719 28 HOH HOH . 
F 4 HOH A 19 720 29 HOH HOH . 
F 4 HOH A 20 721 33 HOH HOH . 
F 4 HOH A 21 722 34 HOH HOH . 
F 4 HOH A 22 724 37 HOH HOH . 
F 4 HOH A 23 725 39 HOH HOH . 
F 4 HOH A 24 726 44 HOH HOH . 
F 4 HOH A 25 727 45 HOH HOH . 
F 4 HOH A 26 728 48 HOH HOH . 
F 4 HOH A 27 729 50 HOH HOH . 
F 4 HOH A 28 730 52 HOH HOH . 
F 4 HOH A 29 731 53 HOH HOH . 
F 4 HOH A 30 732 55 HOH HOH . 
F 4 HOH A 31 733 56 HOH HOH . 
F 4 HOH A 32 734 58 HOH HOH . 
F 4 HOH A 33 735 59 HOH HOH . 
F 4 HOH A 34 736 60 HOH HOH . 
F 4 HOH A 35 737 61 HOH HOH . 
F 4 HOH A 36 739 71 HOH HOH . 
F 4 HOH A 37 740 73 HOH HOH . 
F 4 HOH A 38 741 76 HOH HOH . 
F 4 HOH A 39 742 77 HOH HOH . 
F 4 HOH A 40 743 80 HOH HOH . 
F 4 HOH A 41 744 81 HOH HOH . 
F 4 HOH A 42 745 82 HOH HOH . 
F 4 HOH A 43 746 84 HOH HOH . 
F 4 HOH A 44 747 85 HOH HOH . 
F 4 HOH A 45 748 88 HOH HOH . 
F 4 HOH A 46 749 90 HOH HOH . 
F 4 HOH A 47 750 93 HOH HOH . 
F 4 HOH A 48 751 96 HOH HOH . 
F 4 HOH A 49 752 98 HOH HOH . 
F 4 HOH A 50 753 99 HOH HOH . 
F 4 HOH A 51 754 102 HOH HOH . 
F 4 HOH A 52 755 103 HOH HOH . 
F 4 HOH A 53 756 106 HOH HOH . 
F 4 HOH A 54 757 110 HOH HOH . 
F 4 HOH A 55 758 111 HOH HOH . 
F 4 HOH A 56 759 112 HOH HOH . 
F 4 HOH A 57 760 113 HOH HOH . 
F 4 HOH A 58 761 114 HOH HOH . 
F 4 HOH A 59 762 122 HOH HOH . 
F 4 HOH A 60 763 124 HOH HOH . 
F 4 HOH A 61 764 129 HOH HOH . 
F 4 HOH A 62 766 131 HOH HOH . 
F 4 HOH A 63 767 133 HOH HOH . 
F 4 HOH A 64 768 136 HOH HOH . 
F 4 HOH A 65 769 148 HOH HOH . 
F 4 HOH A 66 770 150 HOH HOH . 
F 4 HOH A 67 771 152 HOH HOH . 
F 4 HOH A 68 772 154 HOH HOH . 
F 4 HOH A 69 773 159 HOH HOH . 
F 4 HOH A 70 774 162 HOH HOH . 
F 4 HOH A 71 775 169 HOH HOH . 
F 4 HOH A 72 776 178 HOH HOH . 
F 4 HOH A 73 777 179 HOH HOH . 
G 4 HOH B 1 226 4 HOH HOH . 
G 4 HOH B 2 227 9 HOH HOH . 
G 4 HOH B 3 228 12 HOH HOH . 
G 4 HOH B 4 229 13 HOH HOH . 
G 4 HOH B 5 230 15 HOH HOH . 
G 4 HOH B 6 231 17 HOH HOH . 
G 4 HOH B 7 232 18 HOH HOH . 
G 4 HOH B 8 233 20 HOH HOH . 
G 4 HOH B 9 234 22 HOH HOH . 
G 4 HOH B 10 235 27 HOH HOH . 
G 4 HOH B 11 236 30 HOH HOH . 
G 4 HOH B 12 237 31 HOH HOH . 
G 4 HOH B 13 238 32 HOH HOH . 
G 4 HOH B 14 239 36 HOH HOH . 
G 4 HOH B 15 240 38 HOH HOH . 
G 4 HOH B 16 241 40 HOH HOH . 
G 4 HOH B 17 242 41 HOH HOH . 
G 4 HOH B 18 243 42 HOH HOH . 
G 4 HOH B 19 244 43 HOH HOH . 
G 4 HOH B 20 245 46 HOH HOH . 
G 4 HOH B 21 246 47 HOH HOH . 
G 4 HOH B 22 247 49 HOH HOH . 
G 4 HOH B 23 248 51 HOH HOH . 
G 4 HOH B 24 249 54 HOH HOH . 
G 4 HOH B 25 250 62 HOH HOH . 
G 4 HOH B 26 251 63 HOH HOH . 
G 4 HOH B 27 252 64 HOH HOH . 
G 4 HOH B 28 253 66 HOH HOH . 
G 4 HOH B 29 254 67 HOH HOH . 
G 4 HOH B 30 255 68 HOH HOH . 
G 4 HOH B 31 256 69 HOH HOH . 
G 4 HOH B 32 257 72 HOH HOH . 
G 4 HOH B 33 258 74 HOH HOH . 
G 4 HOH B 34 259 75 HOH HOH . 
G 4 HOH B 35 260 78 HOH HOH . 
G 4 HOH B 36 261 79 HOH HOH . 
G 4 HOH B 37 262 83 HOH HOH . 
G 4 HOH B 38 263 86 HOH HOH . 
G 4 HOH B 39 264 87 HOH HOH . 
G 4 HOH B 40 265 89 HOH HOH . 
G 4 HOH B 41 266 92 HOH HOH . 
G 4 HOH B 42 267 94 HOH HOH . 
G 4 HOH B 43 268 97 HOH HOH . 
G 4 HOH B 44 269 101 HOH HOH . 
G 4 HOH B 45 270 104 HOH HOH . 
G 4 HOH B 46 271 105 HOH HOH . 
G 4 HOH B 47 272 107 HOH HOH . 
G 4 HOH B 48 273 108 HOH HOH . 
G 4 HOH B 49 275 117 HOH HOH . 
G 4 HOH B 50 276 118 HOH HOH . 
G 4 HOH B 51 277 119 HOH HOH . 
G 4 HOH B 52 278 120 HOH HOH . 
G 4 HOH B 53 279 121 HOH HOH . 
G 4 HOH B 54 280 123 HOH HOH . 
G 4 HOH B 55 281 126 HOH HOH . 
G 4 HOH B 56 282 127 HOH HOH . 
G 4 HOH B 57 283 128 HOH HOH . 
G 4 HOH B 58 284 132 HOH HOH . 
G 4 HOH B 59 285 134 HOH HOH . 
G 4 HOH B 60 286 135 HOH HOH . 
G 4 HOH B 61 287 139 HOH HOH . 
G 4 HOH B 62 288 140 HOH HOH . 
G 4 HOH B 63 289 141 HOH HOH . 
G 4 HOH B 64 290 144 HOH HOH . 
G 4 HOH B 65 291 145 HOH HOH . 
G 4 HOH B 66 292 146 HOH HOH . 
G 4 HOH B 67 293 153 HOH HOH . 
G 4 HOH B 68 294 158 HOH HOH . 
G 4 HOH B 69 295 160 HOH HOH . 
G 4 HOH B 70 296 164 HOH HOH . 
G 4 HOH B 71 297 165 HOH HOH . 
G 4 HOH B 72 298 170 HOH HOH . 
G 4 HOH B 73 723 35 HOH HOH . 
G 4 HOH B 74 738 65 HOH HOH . 
G 4 HOH B 75 765 130 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH2 ETE . . . D 3 -12.626 -15.103 24.373 1 51.78 ? OH2 ETE 224 A 1 
HETATM 2 C C12 ETE . . . D 3 -13.166 -14.063 23.543 1 50 ? C12 ETE 224 A 1 
HETATM 3 C C22 ETE . . . D 3 -12.227 -13.81 22.361 1 49.53 ? C22 ETE 224 A 1 
HETATM 4 O OH3 ETE . . . D 3 -12.637 -14.504 21.175 1 44.02 ? OH3 ETE 224 A 1 
HETATM 5 C C13 ETE . . . D 3 -12.034 -16.598 20.082 1 42.7 ? C13 ETE 224 A 1 
HETATM 6 C C23 ETE . . . D 3 -12.539 -15.922 21.35 1 44.04 ? C23 ETE 224 A 1 
HETATM 7 O OH4 ETE . . . D 3 -12.563 -15.995 18.899 1 43.53 ? OH4 ETE 224 A 1 
HETATM 8 C C14 ETE . . . D 3 -12.956 -16.454 16.554 1 45.34 ? C14 ETE 224 A 1 
HETATM 9 C C24 ETE . . . D 3 -12.712 -17.031 17.929 1 45.54 ? C24 ETE 224 A 1 
HETATM 10 O OH5 ETE . . . D 3 -12.285 -17.27 15.6 1 49.17 ? OH5 ETE 224 A 1 
HETATM 11 C C15 ETE . . . D 3 -10.023 -17.068 14.682 1 49.53 ? C15 ETE 224 A 1 
HETATM 12 C C25 ETE . . . D 3 -11.418 -16.468 14.798 1 47.83 ? C25 ETE 224 A 1 
HETATM 13 O OH6 ETE . . . D 3 -9.633 -17.05 13.311 1 51.44 ? OH6 ETE 224 A 1 
HETATM 14 C C26 ETE . . . D 3 -8.796 -15.943 12.973 1 50.87 ? C26 ETE 224 A 1 
#
_model_server_stats.io_time_ms              46 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           14 
#