data_3B8G # _model_server_result.job_id G_vy2AJFSV6TInvyQNzCJQ _model_server_result.datetime_utc '2025-02-18 09:40:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3b8g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":437}' # _entry.id 3B8G # _exptl.entry_id 3B8G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.166 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-ACETYL-L-GLUTAMATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3B8G _cell.length_a 98.65 _cell.length_b 98.65 _cell.length_c 89.754 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3B8G _symmetry.cell_setting ? _symmetry.Int_Tables_number 149 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 1 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_666 -y+1,-x+1,-z+1 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 49.325 85.433406 89.754 3 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 98.65 0 0 4 'crystal symmetry operation' 6_556 x,x-y,-z+1 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 89.754 5 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 49.325 85.433406 0 6 'crystal symmetry operation' 5_656 -x+y+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 98.65 0 89.754 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H11 N O5' _chem_comp.formula_weight 189.166 _chem_comp.id NLG _chem_comp.mon_nstd_flag . _chem_comp.name N-ACETYL-L-GLUTAMATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA C NLG sing 323 n n CA CB NLG sing 324 n n CA N2 NLG sing 325 n n CA HA NLG sing 326 n n C OXT NLG sing 327 n n C O NLG doub 328 n n OXT HXT NLG sing 329 n n CB CG NLG sing 330 n n CB HBC1 NLG sing 331 n n CB HBC2 NLG sing 332 n n CG CD NLG sing 333 n n CG HGC1 NLG sing 334 n n CG HGC2 NLG sing 335 n n CD OE1 NLG doub 336 n n CD OE2 NLG sing 337 n n OE2 HE2 NLG sing 338 n n C7 C8 NLG sing 339 n n C7 O7 NLG doub 340 n n C7 N2 NLG sing 341 n n C8 H8C1 NLG sing 342 n n C8 H8C2 NLG sing 343 n n C8 H8C3 NLG sing 344 n n N2 H2 NLG sing 345 n n # _atom_sites.entry_id 3B8G _atom_sites.fract_transf_matrix[1][1] 0.010137 _atom_sites.fract_transf_matrix[1][2] 0.005853 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011705 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011142 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 1 1 COA COA . C 3 NLG A 1 437 1 NLG NLG . D 4 HOH A 1 438 1 HOH TIP . D 4 HOH A 2 439 2 HOH TIP . D 4 HOH A 3 440 3 HOH TIP . D 4 HOH A 4 441 4 HOH TIP . D 4 HOH A 5 442 5 HOH TIP . D 4 HOH A 6 443 6 HOH TIP . D 4 HOH A 7 444 7 HOH TIP . D 4 HOH A 8 445 8 HOH TIP . D 4 HOH A 9 446 9 HOH TIP . D 4 HOH A 10 447 10 HOH TIP . D 4 HOH A 11 448 11 HOH TIP . D 4 HOH A 12 449 12 HOH TIP . D 4 HOH A 13 450 13 HOH TIP . D 4 HOH A 14 451 14 HOH TIP . D 4 HOH A 15 452 15 HOH TIP . D 4 HOH A 16 453 16 HOH TIP . D 4 HOH A 17 454 17 HOH TIP . D 4 HOH A 18 455 18 HOH TIP . D 4 HOH A 19 456 19 HOH TIP . D 4 HOH A 20 457 20 HOH TIP . D 4 HOH A 21 458 21 HOH TIP . D 4 HOH A 22 459 22 HOH TIP . D 4 HOH A 23 460 23 HOH TIP . D 4 HOH A 24 461 24 HOH TIP . D 4 HOH A 25 462 25 HOH TIP . D 4 HOH A 26 463 26 HOH TIP . D 4 HOH A 27 464 27 HOH TIP . D 4 HOH A 28 465 28 HOH TIP . D 4 HOH A 29 466 29 HOH TIP . D 4 HOH A 30 467 30 HOH TIP . D 4 HOH A 31 468 31 HOH TIP . D 4 HOH A 32 469 32 HOH TIP . D 4 HOH A 33 470 33 HOH TIP . D 4 HOH A 34 471 34 HOH TIP . D 4 HOH A 35 472 35 HOH TIP . D 4 HOH A 36 473 36 HOH TIP . D 4 HOH A 37 474 37 HOH TIP . D 4 HOH A 38 475 38 HOH TIP . D 4 HOH A 39 476 39 HOH TIP . D 4 HOH A 40 477 40 HOH TIP . D 4 HOH A 41 478 41 HOH TIP . D 4 HOH A 42 479 42 HOH TIP . D 4 HOH A 43 480 43 HOH TIP . D 4 HOH A 44 481 44 HOH TIP . D 4 HOH A 45 482 45 HOH TIP . D 4 HOH A 46 483 46 HOH TIP . D 4 HOH A 47 484 47 HOH TIP . D 4 HOH A 48 485 48 HOH TIP . D 4 HOH A 49 486 49 HOH TIP . D 4 HOH A 50 487 50 HOH TIP . D 4 HOH A 51 488 51 HOH TIP . D 4 HOH A 52 489 52 HOH TIP . D 4 HOH A 53 490 53 HOH TIP . D 4 HOH A 54 491 54 HOH TIP . D 4 HOH A 55 492 55 HOH TIP . D 4 HOH A 56 493 56 HOH TIP . D 4 HOH A 57 494 57 HOH TIP . D 4 HOH A 58 495 58 HOH TIP . D 4 HOH A 59 496 59 HOH TIP . D 4 HOH A 60 497 60 HOH TIP . D 4 HOH A 61 498 61 HOH TIP . D 4 HOH A 62 499 62 HOH TIP . D 4 HOH A 63 500 63 HOH TIP . D 4 HOH A 64 501 64 HOH TIP . D 4 HOH A 65 502 65 HOH TIP . D 4 HOH A 66 503 66 HOH TIP . D 4 HOH A 67 504 67 HOH TIP . D 4 HOH A 68 505 68 HOH TIP . D 4 HOH A 69 506 69 HOH TIP . D 4 HOH A 70 507 70 HOH TIP . D 4 HOH A 71 508 71 HOH TIP . D 4 HOH A 72 509 72 HOH TIP . D 4 HOH A 73 510 73 HOH TIP . D 4 HOH A 74 511 74 HOH TIP . D 4 HOH A 75 512 75 HOH TIP . D 4 HOH A 76 513 76 HOH TIP . D 4 HOH A 77 514 77 HOH TIP . D 4 HOH A 78 515 78 HOH TIP . D 4 HOH A 79 516 79 HOH TIP . D 4 HOH A 80 517 80 HOH TIP . D 4 HOH A 81 518 81 HOH TIP . D 4 HOH A 82 519 82 HOH TIP . D 4 HOH A 83 520 83 HOH TIP . D 4 HOH A 84 521 84 HOH TIP . D 4 HOH A 85 522 85 HOH TIP . D 4 HOH A 86 523 86 HOH TIP . D 4 HOH A 87 524 87 HOH TIP . D 4 HOH A 88 525 88 HOH TIP . D 4 HOH A 89 526 89 HOH TIP . D 4 HOH A 90 527 90 HOH TIP . D 4 HOH A 91 528 91 HOH TIP . D 4 HOH A 92 529 92 HOH TIP . D 4 HOH A 93 530 93 HOH TIP . D 4 HOH A 94 531 94 HOH TIP . D 4 HOH A 95 532 95 HOH TIP . D 4 HOH A 96 533 96 HOH TIP . D 4 HOH A 97 534 97 HOH TIP . D 4 HOH A 98 535 98 HOH TIP . D 4 HOH A 99 536 99 HOH TIP . D 4 HOH A 100 537 100 HOH TIP . D 4 HOH A 101 538 101 HOH TIP . D 4 HOH A 102 539 102 HOH TIP . D 4 HOH A 103 540 103 HOH TIP . D 4 HOH A 104 541 104 HOH TIP . D 4 HOH A 105 542 105 HOH TIP . D 4 HOH A 106 543 106 HOH TIP . D 4 HOH A 107 544 107 HOH TIP . D 4 HOH A 108 545 108 HOH TIP . D 4 HOH A 109 546 109 HOH TIP . D 4 HOH A 110 547 110 HOH TIP . D 4 HOH A 111 548 111 HOH TIP . D 4 HOH A 112 549 112 HOH TIP . D 4 HOH A 113 550 113 HOH TIP . D 4 HOH A 114 551 114 HOH TIP . D 4 HOH A 115 552 115 HOH TIP . D 4 HOH A 116 553 116 HOH TIP . D 4 HOH A 117 554 117 HOH TIP . D 4 HOH A 118 555 118 HOH TIP . D 4 HOH A 119 556 119 HOH TIP . D 4 HOH A 120 557 120 HOH TIP . D 4 HOH A 121 558 121 HOH TIP . D 4 HOH A 122 559 122 HOH TIP . D 4 HOH A 123 560 123 HOH TIP . D 4 HOH A 124 561 124 HOH TIP . D 4 HOH A 125 562 125 HOH TIP . D 4 HOH A 126 563 126 HOH TIP . D 4 HOH A 127 564 127 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA NLG . . . C 3 37.454 -5.115 8.66 1 42.07 ? CA NLG 437 A 1 HETATM 2 C C NLG . . . C 3 37.036 -4.95 7.231 1 44.66 ? C NLG 437 A 1 HETATM 3 O OXT NLG . . . C 3 37.905 -5.29 6.385 1 47.81 ? OXT NLG 437 A 1 HETATM 4 O O NLG . . . C 3 35.867 -4.608 6.916 1 45.06 ? O NLG 437 A 1 HETATM 5 C CB NLG . . . C 3 37.52 -6.617 8.726 1 44.96 ? CB NLG 437 A 1 HETATM 6 C CG NLG . . . C 3 38.132 -7.247 9.962 1 47.39 ? CG NLG 437 A 1 HETATM 7 C CD NLG . . . C 3 38.055 -8.78 9.845 1 49.14 ? CD NLG 437 A 1 HETATM 8 O OE1 NLG . . . C 3 37.182 -9.356 9.148 1 38.82 ? OE1 NLG 437 A 1 HETATM 9 O OE2 NLG . . . C 3 38.78 -9.5 10.576 1 50.79 ? OE2 NLG 437 A 1 HETATM 10 C C7 NLG . . . C 3 35.85 -3.621 9.735 1 43.86 ? C7 NLG 437 A 1 HETATM 11 C C8 NLG . . . C 3 34.741 -3.47 10.729 1 38.28 ? C8 NLG 437 A 1 HETATM 12 O O7 NLG . . . C 3 36.231 -2.629 9.148 1 42.12 ? O7 NLG 437 A 1 HETATM 13 N N2 NLG . . . C 3 36.327 -4.856 9.526 1 45.11 ? N2 NLG 437 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 1299 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 13 #