data_3BAB # _model_server_result.job_id WpBQTskAfvimDm3eAC5VVA _model_server_result.datetime_utc '2025-02-27 02:51:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bab # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 3BAB # _exptl.entry_id 3BAB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 335.227 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.99 _cell.angle_gamma 90 _cell.entry_id 3BAB _cell.length_a 90.57 _cell.length_b 86.726 _cell.length_c 56.856 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BAB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H16 N2 O8 P 1' _chem_comp.formula_weight 335.227 _chem_comp.id NMN _chem_comp.mon_nstd_flag . _chem_comp.name 'BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'NICOTINAMIDE MONONUCLEOTIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3P P NMN doub 308 n n P O1P NMN sing 309 n n P O2P NMN sing 310 n n P O5R NMN sing 311 n n O1P H1PO NMN sing 312 n n O2P H2PO NMN sing 313 n n O5R C5R NMN sing 314 n n C5R C4R NMN sing 315 n n C5R H5R1 NMN sing 316 n n C5R H5R2 NMN sing 317 n n C4R O4R NMN sing 318 n n C4R C3R NMN sing 319 n n C4R H4RC NMN sing 320 n n O4R C1R NMN sing 321 n n C3R O3R NMN sing 322 n n C3R C2R NMN sing 323 n n C3R H3RC NMN sing 324 n n O3R H3RO NMN sing 325 n n C2R O2R NMN sing 326 n n C2R C1R NMN sing 327 n n C2R H2RC NMN sing 328 n n O2R H2RO NMN sing 329 n n C1R N1 NMN sing 330 n n C1R H1RC NMN sing 331 n n N1 C2 NMN doub 332 n y N1 C6 NMN sing 333 n y C2 C3 NMN sing 334 n y C2 HC2 NMN sing 335 n n C3 C7 NMN sing 336 n n C3 C4 NMN doub 337 n y C7 O7 NMN doub 338 n n C7 N7 NMN sing 339 n n N7 HN71 NMN sing 340 n n N7 HN72 NMN sing 341 n n C4 C5 NMN sing 342 n y C4 HC4 NMN sing 343 n n C5 C6 NMN doub 344 n y C5 HC5 NMN sing 345 n n C6 HC6 NMN sing 346 n n # _atom_sites.entry_id 3BAB _atom_sites.fract_transf_matrix[1][1] 0.011041 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002143 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011531 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017917 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 403 403 SO4 SO4 . C 2 SO4 A 1 404 404 SO4 SO4 . D 2 SO4 A 1 405 405 SO4 SO4 . E 2 SO4 A 1 406 406 SO4 SO4 . F 3 NMN A 1 401 401 NMN NMN . G 4 3BD A 1 501 501 3BD 3BD . H 5 GOL A 1 603 603 GOL GOL . I 6 HOH A 1 604 1 HOH WAT . I 6 HOH A 2 605 2 HOH WAT . I 6 HOH A 3 606 3 HOH WAT . I 6 HOH A 4 607 4 HOH WAT . I 6 HOH A 5 608 5 HOH WAT . I 6 HOH A 6 609 6 HOH WAT . I 6 HOH A 7 610 7 HOH WAT . I 6 HOH A 8 611 8 HOH WAT . I 6 HOH A 9 612 9 HOH WAT . I 6 HOH A 10 613 10 HOH WAT . I 6 HOH A 11 614 11 HOH WAT . I 6 HOH A 12 615 12 HOH WAT . I 6 HOH A 13 616 13 HOH WAT . I 6 HOH A 14 617 14 HOH WAT . I 6 HOH A 15 618 15 HOH WAT . I 6 HOH A 16 619 16 HOH WAT . I 6 HOH A 17 620 17 HOH WAT . I 6 HOH A 18 621 18 HOH WAT . I 6 HOH A 19 622 19 HOH WAT . I 6 HOH A 20 623 20 HOH WAT . I 6 HOH A 21 624 21 HOH WAT . I 6 HOH A 22 625 22 HOH WAT . I 6 HOH A 23 626 23 HOH WAT . I 6 HOH A 24 627 24 HOH WAT . I 6 HOH A 25 628 25 HOH WAT . I 6 HOH A 26 629 26 HOH WAT . I 6 HOH A 27 630 27 HOH WAT . I 6 HOH A 28 631 28 HOH WAT . I 6 HOH A 29 632 29 HOH WAT . I 6 HOH A 30 633 30 HOH WAT . I 6 HOH A 31 634 31 HOH WAT . I 6 HOH A 32 635 32 HOH WAT . I 6 HOH A 33 636 33 HOH WAT . I 6 HOH A 34 637 34 HOH WAT . I 6 HOH A 35 638 35 HOH WAT . I 6 HOH A 36 639 36 HOH WAT . I 6 HOH A 37 640 37 HOH WAT . I 6 HOH A 38 641 38 HOH WAT . I 6 HOH A 39 642 39 HOH WAT . I 6 HOH A 40 643 40 HOH WAT . I 6 HOH A 41 644 41 HOH WAT . I 6 HOH A 42 645 42 HOH WAT . I 6 HOH A 43 646 43 HOH WAT . I 6 HOH A 44 647 44 HOH WAT . I 6 HOH A 45 648 45 HOH WAT . I 6 HOH A 46 649 46 HOH WAT . I 6 HOH A 47 650 47 HOH WAT . I 6 HOH A 48 651 48 HOH WAT . I 6 HOH A 49 652 49 HOH WAT . I 6 HOH A 50 653 50 HOH WAT . I 6 HOH A 51 654 51 HOH WAT . I 6 HOH A 52 655 52 HOH WAT . I 6 HOH A 53 656 53 HOH WAT . I 6 HOH A 54 657 54 HOH WAT . I 6 HOH A 55 658 55 HOH WAT . I 6 HOH A 56 659 56 HOH WAT . I 6 HOH A 57 660 57 HOH WAT . I 6 HOH A 58 661 58 HOH WAT . I 6 HOH A 59 662 59 HOH WAT . I 6 HOH A 60 663 60 HOH WAT . I 6 HOH A 61 664 61 HOH WAT . I 6 HOH A 62 665 62 HOH WAT . I 6 HOH A 63 666 63 HOH WAT . I 6 HOH A 64 667 64 HOH WAT . I 6 HOH A 65 668 65 HOH WAT . I 6 HOH A 66 669 66 HOH WAT . I 6 HOH A 67 670 67 HOH WAT . I 6 HOH A 68 671 68 HOH WAT . I 6 HOH A 69 672 69 HOH WAT . I 6 HOH A 70 673 70 HOH WAT . I 6 HOH A 71 674 71 HOH WAT . I 6 HOH A 72 675 72 HOH WAT . I 6 HOH A 73 676 73 HOH WAT . I 6 HOH A 74 677 74 HOH WAT . I 6 HOH A 75 678 75 HOH WAT . I 6 HOH A 76 679 76 HOH WAT . I 6 HOH A 77 680 77 HOH WAT . I 6 HOH A 78 681 78 HOH WAT . I 6 HOH A 79 682 79 HOH WAT . I 6 HOH A 80 683 80 HOH WAT . I 6 HOH A 81 684 81 HOH WAT . I 6 HOH A 82 685 82 HOH WAT . I 6 HOH A 83 686 83 HOH WAT . I 6 HOH A 84 687 84 HOH WAT . I 6 HOH A 85 688 85 HOH WAT . I 6 HOH A 86 689 86 HOH WAT . I 6 HOH A 87 690 87 HOH WAT . I 6 HOH A 88 691 88 HOH WAT . I 6 HOH A 89 692 89 HOH WAT . I 6 HOH A 90 693 90 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3P NMN . . . F 3 9.276 35.43 23.319 1 42.05 ? O3P NMN 401 A 1 HETATM 2 P P NMN . . . F 3 9.719 34.278 24.119 1 43.36 ? P NMN 401 A 1 HETATM 3 O O1P NMN . . . F 3 10.205 34.572 25.496 1 43.23 ? O1P NMN 401 A 1 HETATM 4 O O2P NMN . . . F 3 10.91 33.526 23.389 1 43.36 ? O2P NMN 401 A 1 HETATM 5 O O5R NMN . . . F 3 8.539 33.206 24.096 1 39.15 ? O5R NMN 401 A 1 HETATM 6 C C5R NMN . . . F 3 8.739 31.873 24.674 1 31.47 ? C5R NMN 401 A 1 HETATM 7 C C4R NMN . . . F 3 7.378 31.25 24.95 1 27.32 ? C4R NMN 401 A 1 HETATM 8 O O4R NMN . . . F 3 6.721 31.911 26.066 1 25.94 ? O4R NMN 401 A 1 HETATM 9 C C3R NMN . . . F 3 6.339 31.302 23.783 1 25.4 ? C3R NMN 401 A 1 HETATM 10 O O3R NMN . . . F 3 5.672 30.046 23.64 1 23.71 ? O3R NMN 401 A 1 HETATM 11 C C2R NMN . . . F 3 5.4 32.418 24.198 1 25.07 ? C2R NMN 401 A 1 HETATM 12 O O2R NMN . . . F 3 4.098 32.299 23.653 1 25.28 ? O2R NMN 401 A 1 HETATM 13 C C1R NMN . . . F 3 5.371 32.305 25.663 1 23.94 ? C1R NMN 401 A 1 HETATM 14 N N1 NMN . . . F 3 5.037 33.564 26.379 1 20.21 ? N1 NMN 401 A 1 HETATM 15 C C2 NMN . . . F 3 3.695 33.865 26.74 1 19.49 ? C2 NMN 401 A 1 HETATM 16 C C3 NMN . . . F 3 3.433 35.071 27.397 1 20.15 ? C3 NMN 401 A 1 HETATM 17 C C7 NMN . . . F 3 1.978 35.405 27.779 1 19.8 ? C7 NMN 401 A 1 HETATM 18 O O7 NMN . . . F 3 1.788 36.466 28.331 1 20.94 ? O7 NMN 401 A 1 HETATM 19 N N7 NMN . . . F 3 1.001 34.583 27.51 1 19.1 ? N7 NMN 401 A 1 HETATM 20 C C4 NMN . . . F 3 4.524 36.018 27.714 1 18.11 ? C4 NMN 401 A 1 HETATM 21 C C5 NMN . . . F 3 5.853 35.667 27.333 1 18.04 ? C5 NMN 401 A 1 HETATM 22 C C6 NMN . . . F 3 6.134 34.444 26.66 1 18.62 ? C6 NMN 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #