data_3BAC # _model_server_result.job_id lQa81gEmLYqje18mC8czHA _model_server_result.datetime_utc '2025-02-27 02:21:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bac # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 3BAC # _exptl.entry_id 3BAC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 428.486 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[2-(2,4-diaminopyrido[2,3-d]pyrimidin-7-yl)-2-methylpropyl]-4-phenoxybenzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BAC _cell.length_a 95.031 _cell.length_b 95.031 _cell.length_c 197.183 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BAC _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_885 -y+3,-x+3,-z+2/3 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 142.5465 246.89778 131.455333 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H24 N6 O2' _chem_comp.formula_weight 428.486 _chem_comp.id 3B9 _chem_comp.mon_nstd_flag . _chem_comp.name N-[2-(2,4-diaminopyrido[2,3-d]pyrimidin-7-yl)-2-methylpropyl]-4-phenoxybenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C14 3B9 doub 1 n y C15 C16 3B9 sing 2 n y C1 N1 3B9 doub 3 n y C1 N2 3B9 sing 4 n y C1 N4 3B9 sing 5 n n C2 C4 3B9 doub 6 n y C2 N1 3B9 sing 7 n y C2 N5 3B9 sing 8 n n C3 C4 3B9 sing 9 n y C3 N2 3B9 doub 10 n y C3 N3 3B9 sing 11 n y C8 C7 3B9 sing 12 n n C8 C9 3B9 sing 13 n n C8 C10 3B9 sing 14 n n C8 C11 3B9 sing 15 n n C4 C5 3B9 sing 16 n y C5 C6 3B9 doub 17 n y C6 C7 3B9 sing 18 n y C7 N3 3B9 doub 19 n y C9 N6 3B9 sing 20 n n N6 C12 3B9 sing 21 n n C12 O1 3B9 doub 22 n n C12 C13 3B9 sing 23 n n C13 C14 3B9 sing 24 n y C13 C18 3B9 doub 25 n y C16 C17 3B9 doub 26 n y C16 O2 3B9 sing 27 n n C17 C18 3B9 sing 28 n y O2 C19 3B9 sing 29 n n C19 C20 3B9 doub 30 n y C19 C24 3B9 sing 31 n y C20 C21 3B9 sing 32 n y C21 C22 3B9 doub 33 n y C22 C23 3B9 sing 34 n y C23 C24 3B9 doub 35 n y C15 H15 3B9 sing 36 n n C5 H5 3B9 sing 37 n n C6 H6 3B9 sing 38 n n C9 H9 3B9 sing 39 n n C9 H9A 3B9 sing 40 n n N4 HN4 3B9 sing 41 n n N4 HN4A 3B9 sing 42 n n N5 HN5 3B9 sing 43 n n N5 HN5A 3B9 sing 44 n n C10 H10 3B9 sing 45 n n C10 H10A 3B9 sing 46 n n C10 H10B 3B9 sing 47 n n C11 H11 3B9 sing 48 n n C11 H11A 3B9 sing 49 n n C11 H11B 3B9 sing 50 n n N6 HN6 3B9 sing 51 n n C14 H14 3B9 sing 52 n n C17 H17 3B9 sing 53 n n C18 H18 3B9 sing 54 n n C20 H20 3B9 sing 55 n n C21 H21 3B9 sing 56 n n C22 H22 3B9 sing 57 n n C23 H23 3B9 sing 58 n n C24 H24 3B9 sing 59 n n # _atom_sites.entry_id 3BAC _atom_sites.fract_transf_matrix[1][1] 0.010523 _atom_sites.fract_transf_matrix[1][2] 0.006075 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012151 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005071 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 402 402 PO4 PO4 . C 2 PO4 A 1 403 403 PO4 PO4 . D 2 PO4 A 1 404 404 PO4 PO4 . E 3 3B9 A 1 501 501 3B9 3B9 . F 4 HOH A 1 1 1 HOH WAT . F 4 HOH A 2 2 2 HOH WAT . F 4 HOH A 3 3 3 HOH WAT . F 4 HOH A 4 4 4 HOH WAT . F 4 HOH A 5 5 5 HOH WAT . F 4 HOH A 6 6 6 HOH WAT . F 4 HOH A 7 7 7 HOH WAT . F 4 HOH A 8 8 8 HOH WAT . F 4 HOH A 9 9 9 HOH WAT . F 4 HOH A 10 10 10 HOH WAT . F 4 HOH A 11 11 11 HOH WAT . F 4 HOH A 12 12 12 HOH WAT . F 4 HOH A 13 13 13 HOH WAT . F 4 HOH A 14 14 14 HOH WAT . F 4 HOH A 15 15 15 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 3B9 . . . E 3 101.034 106.971 76.026 1 45.68 ? C15 3B9 501 A 1 HETATM 2 C C1 3B9 . . . E 3 91.058 107.943 82.908 1 45.68 ? C1 3B9 501 A 1 HETATM 3 C C2 3B9 . . . E 3 90.381 109.526 81.284 1 45.68 ? C2 3B9 501 A 1 HETATM 4 C C3 3B9 . . . E 3 92.349 108.133 80.953 1 45.68 ? C3 3B9 501 A 1 HETATM 5 C C8 3B9 . . . E 3 94.945 107.762 78.198 1 45.68 ? C8 3B9 501 A 1 HETATM 6 C C4 3B9 . . . E 3 91.478 109.16 80.456 1 45.68 ? C4 3B9 501 A 1 HETATM 7 C C5 3B9 . . . E 3 91.78 109.72 79.185 1 45.68 ? C5 3B9 501 A 1 HETATM 8 C C6 3B9 . . . E 3 92.889 109.28 78.446 1 45.68 ? C6 3B9 501 A 1 HETATM 9 C C7 3B9 . . . E 3 93.708 108.261 78.99 1 45.68 ? C7 3B9 501 A 1 HETATM 10 C C9 3B9 . . . E 3 96.163 108.638 78.572 1 45.68 ? C9 3B9 501 A 1 HETATM 11 N N1 3B9 . . . E 3 90.182 108.915 82.499 1 45.68 ? N1 3B9 501 A 1 HETATM 12 N N2 3B9 . . . E 3 92.13 107.55 82.152 1 45.68 ? N2 3B9 501 A 1 HETATM 13 N N3 3B9 . . . E 3 93.42 107.713 80.234 1 45.68 ? N3 3B9 501 A 1 HETATM 14 N N4 3B9 . . . E 3 90.848 107.337 84.125 1 45.68 ? N4 3B9 501 A 1 HETATM 15 N N5 3B9 . . . E 3 89.472 110.511 80.892 1 45.68 ? N5 3B9 501 A 1 HETATM 16 C C10 3B9 . . . E 3 95.239 106.28 78.545 1 45.68 ? C10 3B9 501 A 1 HETATM 17 C C11 3B9 . . . E 3 94.767 107.814 76.656 1 45.68 ? C11 3B9 501 A 1 HETATM 18 N N6 3B9 . . . E 3 97.402 108.298 77.885 1 45.68 ? N6 3B9 501 A 1 HETATM 19 C C12 3B9 . . . E 3 98.104 109.196 77.1 1 45.68 ? C12 3B9 501 A 1 HETATM 20 O O1 3B9 . . . E 3 97.734 110.374 76.906 1 45.68 ? O1 3B9 501 A 1 HETATM 21 C C13 3B9 . . . E 3 99.36 108.742 76.459 1 45.68 ? C13 3B9 501 A 1 HETATM 22 C C14 3B9 . . . E 3 99.823 107.397 76.651 1 45.68 ? C14 3B9 501 A 1 HETATM 23 C C16 3B9 . . . E 3 101.772 107.884 75.215 1 45.68 ? C16 3B9 501 A 1 HETATM 24 C C17 3B9 . . . E 3 101.293 109.233 75.038 1 45.68 ? C17 3B9 501 A 1 HETATM 25 C C18 3B9 . . . E 3 100.097 109.652 75.653 1 45.68 ? C18 3B9 501 A 1 HETATM 26 O O2 3B9 . . . E 3 102.962 107.46 74.593 1 45.68 ? O2 3B9 501 A 1 HETATM 27 C C19 3B9 . . . E 3 103.391 108.125 73.43 1 45.68 ? C19 3B9 501 A 1 HETATM 28 C C20 3B9 . . . E 3 102.689 108.049 72.169 1 45.68 ? C20 3B9 501 A 1 HETATM 29 C C21 3B9 . . . E 3 103.188 108.762 71.048 1 45.68 ? C21 3B9 501 A 1 HETATM 30 C C22 3B9 . . . E 3 104.379 109.548 71.165 1 45.68 ? C22 3B9 501 A 1 HETATM 31 C C23 3B9 . . . E 3 105.077 109.621 72.412 1 45.68 ? C23 3B9 501 A 1 HETATM 32 C C24 3B9 . . . E 3 104.588 108.914 73.544 1 45.68 ? C24 3B9 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 546 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #