data_3BAF # _model_server_result.job_id HR_cktuDjj38ljvfjKsOEw _model_server_result.datetime_utc '2024-11-02 08:39:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3baf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 3BAF # _exptl.entry_id 3BAF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 174.151 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BAF _cell.length_a 67.297 _cell.length_b 67.297 _cell.length_c 97.692 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BAF _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H10 O5' _chem_comp.formula_weight 174.151 _chem_comp.id SKM _chem_comp.mon_nstd_flag . _chem_comp.name '(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms SHIKIMATE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O12 C8 SKM sing 327 n n O12 H12 SKM sing 328 n n C8 C6 SKM sing 329 n n C8 C9 SKM sing 330 n n C8 H8 SKM sing 331 n n C6 O7 SKM sing 332 n n C6 C5 SKM sing 333 n n C6 H6 SKM sing 334 n n O7 HO7 SKM sing 335 n n C5 C4 SKM sing 336 n n C5 H51 SKM sing 337 n n C5 H52 SKM sing 338 n n C4 C1 SKM sing 339 n n C4 C10 SKM doub 340 n n C1 O2 SKM sing 341 n n C1 O3 SKM doub 342 n n O2 HO2 SKM sing 343 n n C10 C9 SKM sing 344 n n C10 H10 SKM sing 345 n n C9 O11 SKM sing 346 n n C9 H9 SKM sing 347 n n O11 H11 SKM sing 348 n n # _atom_sites.entry_id 3BAF _atom_sites.fract_transf_matrix[1][1] 0.014859 _atom_sites.fract_transf_matrix[1][2] 0.008579 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017158 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010236 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 700 700 ANP ANP . C 3 SKM A 1 500 500 SKM SKM . D 4 HOH A 1 701 1 HOH HOH . D 4 HOH A 2 702 2 HOH HOH . D 4 HOH A 3 703 3 HOH HOH . D 4 HOH A 4 704 4 HOH HOH . D 4 HOH A 5 705 5 HOH HOH . D 4 HOH A 6 706 6 HOH HOH . D 4 HOH A 7 707 7 HOH HOH . D 4 HOH A 8 708 8 HOH HOH . D 4 HOH A 9 709 9 HOH HOH . D 4 HOH A 10 710 10 HOH HOH . D 4 HOH A 11 711 11 HOH HOH . D 4 HOH A 12 712 12 HOH HOH . D 4 HOH A 13 713 13 HOH HOH . D 4 HOH A 14 714 14 HOH HOH . D 4 HOH A 15 715 15 HOH HOH . D 4 HOH A 16 716 16 HOH HOH . D 4 HOH A 17 717 17 HOH HOH . D 4 HOH A 18 718 18 HOH HOH . D 4 HOH A 19 719 19 HOH HOH . D 4 HOH A 20 720 20 HOH HOH . D 4 HOH A 21 721 21 HOH HOH . D 4 HOH A 22 722 22 HOH HOH . D 4 HOH A 23 723 23 HOH HOH . D 4 HOH A 24 724 24 HOH HOH . D 4 HOH A 25 725 25 HOH HOH . D 4 HOH A 26 726 26 HOH HOH . D 4 HOH A 27 727 27 HOH HOH . D 4 HOH A 28 728 28 HOH HOH . D 4 HOH A 29 729 29 HOH HOH . D 4 HOH A 30 730 30 HOH HOH . D 4 HOH A 31 731 31 HOH HOH . D 4 HOH A 32 732 32 HOH HOH . D 4 HOH A 33 733 33 HOH HOH . D 4 HOH A 34 734 34 HOH HOH . D 4 HOH A 35 735 35 HOH HOH . D 4 HOH A 36 736 36 HOH HOH . D 4 HOH A 37 737 37 HOH HOH . D 4 HOH A 38 738 38 HOH HOH . D 4 HOH A 39 739 39 HOH HOH . D 4 HOH A 40 740 40 HOH HOH . D 4 HOH A 41 741 41 HOH HOH . D 4 HOH A 42 742 42 HOH HOH . D 4 HOH A 43 743 43 HOH HOH . D 4 HOH A 44 744 44 HOH HOH . D 4 HOH A 45 745 45 HOH HOH . D 4 HOH A 46 746 46 HOH HOH . D 4 HOH A 47 747 47 HOH HOH . D 4 HOH A 48 748 48 HOH HOH . D 4 HOH A 49 749 49 HOH HOH . D 4 HOH A 50 750 50 HOH HOH . D 4 HOH A 51 751 51 HOH HOH . D 4 HOH A 52 752 52 HOH HOH . D 4 HOH A 53 753 53 HOH HOH . D 4 HOH A 54 754 54 HOH HOH . D 4 HOH A 55 755 55 HOH HOH . D 4 HOH A 56 756 56 HOH HOH . D 4 HOH A 57 757 57 HOH HOH . D 4 HOH A 58 758 58 HOH HOH . D 4 HOH A 59 759 59 HOH HOH . D 4 HOH A 60 760 60 HOH HOH . D 4 HOH A 61 761 61 HOH HOH . D 4 HOH A 62 762 62 HOH HOH . D 4 HOH A 63 763 63 HOH HOH . D 4 HOH A 64 764 64 HOH HOH . D 4 HOH A 65 765 65 HOH HOH . D 4 HOH A 66 766 66 HOH HOH . D 4 HOH A 67 767 67 HOH HOH . D 4 HOH A 68 768 68 HOH HOH . D 4 HOH A 69 769 69 HOH HOH . D 4 HOH A 70 770 70 HOH HOH . D 4 HOH A 71 771 71 HOH HOH . D 4 HOH A 72 772 72 HOH HOH . D 4 HOH A 73 773 73 HOH HOH . D 4 HOH A 74 774 74 HOH HOH . D 4 HOH A 75 775 75 HOH HOH . D 4 HOH A 76 776 76 HOH HOH . D 4 HOH A 77 777 77 HOH HOH . D 4 HOH A 78 778 78 HOH HOH . D 4 HOH A 79 779 79 HOH HOH . D 4 HOH A 80 780 80 HOH HOH . D 4 HOH A 81 781 81 HOH HOH . D 4 HOH A 82 782 82 HOH HOH . D 4 HOH A 83 783 83 HOH HOH . D 4 HOH A 84 784 84 HOH HOH . D 4 HOH A 85 785 85 HOH HOH . D 4 HOH A 86 786 86 HOH HOH . D 4 HOH A 87 787 87 HOH HOH . D 4 HOH A 88 788 88 HOH HOH . D 4 HOH A 89 789 89 HOH HOH . D 4 HOH A 90 790 90 HOH HOH . D 4 HOH A 91 791 91 HOH HOH . D 4 HOH A 92 792 92 HOH HOH . D 4 HOH A 93 793 93 HOH HOH . D 4 HOH A 94 794 94 HOH HOH . D 4 HOH A 95 795 95 HOH HOH . D 4 HOH A 96 796 96 HOH HOH . D 4 HOH A 97 797 97 HOH HOH . D 4 HOH A 98 798 98 HOH HOH . D 4 HOH A 99 799 99 HOH HOH . D 4 HOH A 100 800 100 HOH HOH . D 4 HOH A 101 801 101 HOH HOH . D 4 HOH A 102 802 102 HOH HOH . D 4 HOH A 103 803 103 HOH HOH . D 4 HOH A 104 804 104 HOH HOH . D 4 HOH A 105 805 105 HOH HOH . D 4 HOH A 106 806 106 HOH HOH . D 4 HOH A 107 807 107 HOH HOH . D 4 HOH A 108 808 108 HOH HOH . D 4 HOH A 109 809 109 HOH HOH . D 4 HOH A 110 810 110 HOH HOH . D 4 HOH A 111 811 111 HOH HOH . D 4 HOH A 112 812 112 HOH HOH . D 4 HOH A 113 813 113 HOH HOH . D 4 HOH A 114 814 114 HOH HOH . D 4 HOH A 115 815 115 HOH HOH . D 4 HOH A 116 816 116 HOH HOH . D 4 HOH A 117 817 117 HOH HOH . D 4 HOH A 118 818 118 HOH HOH . D 4 HOH A 119 819 119 HOH HOH . D 4 HOH A 120 820 120 HOH HOH . D 4 HOH A 121 821 121 HOH HOH . D 4 HOH A 122 822 122 HOH HOH . D 4 HOH A 123 823 123 HOH HOH . D 4 HOH A 124 824 124 HOH HOH . D 4 HOH A 125 825 125 HOH HOH . D 4 HOH A 126 826 126 HOH HOH . D 4 HOH A 127 827 127 HOH HOH . D 4 HOH A 128 828 128 HOH HOH . D 4 HOH A 129 829 129 HOH HOH . D 4 HOH A 130 830 130 HOH HOH . D 4 HOH A 131 831 131 HOH HOH . D 4 HOH A 132 832 132 HOH HOH . D 4 HOH A 133 833 133 HOH HOH . D 4 HOH A 134 834 134 HOH HOH . D 4 HOH A 135 835 135 HOH HOH . D 4 HOH A 136 836 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O12 SKM . . . C 3 -20.812 5.824 34.181 1 34.79 ? O12 SKM 500 A 1 HETATM 2 C C8 SKM . . . C 3 -20.207 6.341 32.962 1 37.35 ? C8 SKM 500 A 1 HETATM 3 C C6 SKM . . . C 3 -20.584 7.795 32.495 1 36.81 ? C6 SKM 500 A 1 HETATM 4 O O7 SKM . . . C 3 -20.688 8.833 33.562 1 33.8 ? O7 SKM 500 A 1 HETATM 5 C C5 SKM . . . C 3 -21.689 7.808 31.385 1 31.53 ? C5 SKM 500 A 1 HETATM 6 C C4 SKM . . . C 3 -22.488 6.733 31.123 1 30.68 ? C4 SKM 500 A 1 HETATM 7 C C1 SKM . . . C 3 -23.713 6.834 30.537 1 32.97 ? C1 SKM 500 A 1 HETATM 8 O O2 SKM . . . C 3 -24.418 5.752 30.453 1 32.18 ? O2 SKM 500 A 1 HETATM 9 O O3 SKM . . . C 3 -24.159 7.959 30.109 1 27.64 ? O3 SKM 500 A 1 HETATM 10 C C10 SKM . . . C 3 -22.06 5.513 31.533 1 30.45 ? C10 SKM 500 A 1 HETATM 11 C C9 SKM . . . C 3 -20.574 5.319 31.862 1 38.92 ? C9 SKM 500 A 1 HETATM 12 O O11 SKM . . . C 3 -19.629 5.417 30.754 1 38.48 ? O11 SKM 500 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 211 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #