data_3BAJ # _model_server_result.job_id SBbQZD2JBu0YbYhMMWUtgQ _model_server_result.datetime_utc '2024-11-06 01:57:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3baj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 3BAJ # _exptl.entry_id 3BAJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BAJ _cell.length_a 53.14 _cell.length_b 69.2 _cell.length_c 132.66 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BAJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 A SG CYS 86 A CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 70 A CYS 70 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 141 A CYS 141 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 378 A CYS 378 1_555 A SG CYS 384 A CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 A SG CYS 450 A CYS 450 1_555 A SG CYS 462 A CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? covale ? covale1 A C PCA 1 A PCA 1 1_555 A N TYR 2 A TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A ND2 ASN 461 A ASN 461 1_555 B C1 NAG . A NAG 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? metalc ? metalc1 A OD1 ASN 100 A ASN 100 1_555 E CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc2 A O ARG 158 A ARG 158 1_555 E CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc3 A OD1 ASP 167 A ASP 167 1_555 E CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc4 A OD2 ASP 167 A ASP 167 1_555 E CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc5 A O HIS 201 A HIS 201 1_555 E CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc6 E CA CA . A CA 498 1_555 F O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc7 E CA CA . A CA 498 1_555 F O HOH . A HOH 653 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 379 n n N O2 NO3 sing 380 n n N O3 NO3 sing 381 n n # _atom_sites.entry_id 3BAJ _atom_sites.fract_transf_matrix[1][1] 0.018818 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014451 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007538 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 497 497 NAG NAG . C 3 ARE A 1 500 500 ARE ARE . D 4 NO3 A 1 501 501 NO3 NO3 . E 5 CA A 1 498 498 CA CA . F 6 HOH A 1 502 502 HOH HOH . F 6 HOH A 2 503 503 HOH HOH . F 6 HOH A 3 504 504 HOH HOH . F 6 HOH A 4 505 505 HOH HOH . F 6 HOH A 5 506 506 HOH HOH . F 6 HOH A 6 507 507 HOH HOH . F 6 HOH A 7 508 508 HOH HOH . F 6 HOH A 8 509 509 HOH HOH . F 6 HOH A 9 510 510 HOH HOH . F 6 HOH A 10 511 511 HOH HOH . F 6 HOH A 11 512 512 HOH HOH . F 6 HOH A 12 513 513 HOH HOH . F 6 HOH A 13 514 514 HOH HOH . F 6 HOH A 14 515 515 HOH HOH . F 6 HOH A 15 516 516 HOH HOH . F 6 HOH A 16 517 517 HOH HOH . F 6 HOH A 17 518 518 HOH HOH . F 6 HOH A 18 519 519 HOH HOH . F 6 HOH A 19 520 520 HOH HOH . F 6 HOH A 20 521 521 HOH HOH . F 6 HOH A 21 522 522 HOH HOH . F 6 HOH A 22 523 523 HOH HOH . F 6 HOH A 23 524 524 HOH HOH . F 6 HOH A 24 525 525 HOH HOH . F 6 HOH A 25 526 526 HOH HOH . F 6 HOH A 26 527 527 HOH HOH . F 6 HOH A 27 528 528 HOH HOH . F 6 HOH A 28 529 529 HOH HOH . F 6 HOH A 29 530 530 HOH HOH . F 6 HOH A 30 531 531 HOH HOH . F 6 HOH A 31 532 532 HOH HOH . F 6 HOH A 32 533 533 HOH HOH . F 6 HOH A 33 534 534 HOH HOH . F 6 HOH A 34 535 535 HOH HOH . F 6 HOH A 35 536 536 HOH HOH . F 6 HOH A 36 537 537 HOH HOH . F 6 HOH A 37 538 538 HOH HOH . F 6 HOH A 38 539 539 HOH HOH . F 6 HOH A 39 540 540 HOH HOH . F 6 HOH A 40 541 541 HOH HOH . F 6 HOH A 41 542 542 HOH HOH . F 6 HOH A 42 543 543 HOH HOH . F 6 HOH A 43 544 544 HOH HOH . F 6 HOH A 44 545 545 HOH HOH . F 6 HOH A 45 546 546 HOH HOH . F 6 HOH A 46 547 547 HOH HOH . F 6 HOH A 47 548 548 HOH HOH . F 6 HOH A 48 549 549 HOH HOH . F 6 HOH A 49 550 550 HOH HOH . F 6 HOH A 50 551 551 HOH HOH . F 6 HOH A 51 552 552 HOH HOH . F 6 HOH A 52 553 553 HOH HOH . F 6 HOH A 53 554 554 HOH HOH . F 6 HOH A 54 555 555 HOH HOH . F 6 HOH A 55 556 556 HOH HOH . F 6 HOH A 56 557 557 HOH HOH . F 6 HOH A 57 558 558 HOH HOH . F 6 HOH A 58 559 559 HOH HOH . F 6 HOH A 59 560 560 HOH HOH . F 6 HOH A 60 561 561 HOH HOH . F 6 HOH A 61 562 562 HOH HOH . F 6 HOH A 62 563 563 HOH HOH . F 6 HOH A 63 564 564 HOH HOH . F 6 HOH A 64 565 565 HOH HOH . F 6 HOH A 65 566 566 HOH HOH . F 6 HOH A 66 567 567 HOH HOH . F 6 HOH A 67 568 568 HOH HOH . F 6 HOH A 68 569 569 HOH HOH . F 6 HOH A 69 570 570 HOH HOH . F 6 HOH A 70 571 571 HOH HOH . F 6 HOH A 71 572 572 HOH HOH . F 6 HOH A 72 573 573 HOH HOH . F 6 HOH A 73 574 574 HOH HOH . F 6 HOH A 74 575 575 HOH HOH . F 6 HOH A 75 576 576 HOH HOH . F 6 HOH A 76 577 577 HOH HOH . F 6 HOH A 77 578 578 HOH HOH . F 6 HOH A 78 579 579 HOH HOH . F 6 HOH A 79 580 580 HOH HOH . F 6 HOH A 80 581 581 HOH HOH . F 6 HOH A 81 582 582 HOH HOH . F 6 HOH A 82 583 583 HOH HOH . F 6 HOH A 83 584 584 HOH HOH . F 6 HOH A 84 585 585 HOH HOH . F 6 HOH A 85 586 586 HOH HOH . F 6 HOH A 86 587 587 HOH HOH . F 6 HOH A 87 588 588 HOH HOH . F 6 HOH A 88 589 589 HOH HOH . F 6 HOH A 89 590 590 HOH HOH . F 6 HOH A 90 591 591 HOH HOH . F 6 HOH A 91 592 592 HOH HOH . F 6 HOH A 92 593 593 HOH HOH . F 6 HOH A 93 594 594 HOH HOH . F 6 HOH A 94 595 595 HOH HOH . F 6 HOH A 95 596 596 HOH HOH . F 6 HOH A 96 597 597 HOH HOH . F 6 HOH A 97 598 598 HOH HOH . F 6 HOH A 98 599 599 HOH HOH . F 6 HOH A 99 600 600 HOH HOH . F 6 HOH A 100 601 601 HOH HOH . F 6 HOH A 101 602 602 HOH HOH . F 6 HOH A 102 603 603 HOH HOH . F 6 HOH A 103 604 604 HOH HOH . F 6 HOH A 104 605 605 HOH HOH . F 6 HOH A 105 606 606 HOH HOH . F 6 HOH A 106 607 607 HOH HOH . F 6 HOH A 107 608 608 HOH HOH . F 6 HOH A 108 609 609 HOH HOH . F 6 HOH A 109 610 610 HOH HOH . F 6 HOH A 110 611 611 HOH HOH . F 6 HOH A 111 612 612 HOH HOH . F 6 HOH A 112 613 613 HOH HOH . F 6 HOH A 113 614 614 HOH HOH . F 6 HOH A 114 615 615 HOH HOH . F 6 HOH A 115 616 616 HOH HOH . F 6 HOH A 116 617 617 HOH HOH . F 6 HOH A 117 618 618 HOH HOH . F 6 HOH A 118 619 619 HOH HOH . F 6 HOH A 119 620 620 HOH HOH . F 6 HOH A 120 621 621 HOH HOH . F 6 HOH A 121 622 622 HOH HOH . F 6 HOH A 122 623 623 HOH HOH . F 6 HOH A 123 624 624 HOH HOH . F 6 HOH A 124 625 625 HOH HOH . F 6 HOH A 125 626 626 HOH HOH . F 6 HOH A 126 627 627 HOH HOH . F 6 HOH A 127 628 628 HOH HOH . F 6 HOH A 128 629 629 HOH HOH . F 6 HOH A 129 630 630 HOH HOH . F 6 HOH A 130 631 631 HOH HOH . F 6 HOH A 131 632 632 HOH HOH . F 6 HOH A 132 633 633 HOH HOH . F 6 HOH A 133 634 634 HOH HOH . F 6 HOH A 134 635 635 HOH HOH . F 6 HOH A 135 636 636 HOH HOH . F 6 HOH A 136 637 637 HOH HOH . F 6 HOH A 137 638 638 HOH HOH . F 6 HOH A 138 639 639 HOH HOH . F 6 HOH A 139 640 640 HOH HOH . F 6 HOH A 140 641 641 HOH HOH . F 6 HOH A 141 642 642 HOH HOH . F 6 HOH A 142 643 643 HOH HOH . F 6 HOH A 143 644 644 HOH HOH . F 6 HOH A 144 645 645 HOH HOH . F 6 HOH A 145 646 646 HOH HOH . F 6 HOH A 146 647 647 HOH HOH . F 6 HOH A 147 648 648 HOH HOH . F 6 HOH A 148 649 649 HOH HOH . F 6 HOH A 149 650 650 HOH HOH . F 6 HOH A 150 651 651 HOH HOH . F 6 HOH A 151 652 652 HOH HOH . F 6 HOH A 152 653 653 HOH HOH . F 6 HOH A 153 654 654 HOH HOH . F 6 HOH A 154 655 655 HOH HOH . F 6 HOH A 155 656 656 HOH HOH . F 6 HOH A 156 657 657 HOH HOH . F 6 HOH A 157 658 658 HOH HOH . F 6 HOH A 158 659 659 HOH HOH . F 6 HOH A 159 660 660 HOH HOH . F 6 HOH A 160 661 661 HOH HOH . F 6 HOH A 161 662 662 HOH HOH . F 6 HOH A 162 663 663 HOH HOH . F 6 HOH A 163 664 664 HOH HOH . F 6 HOH A 164 665 665 HOH HOH . F 6 HOH A 165 666 666 HOH HOH . F 6 HOH A 166 667 667 HOH HOH . F 6 HOH A 167 668 668 HOH HOH . F 6 HOH A 168 669 669 HOH HOH . F 6 HOH A 169 670 670 HOH HOH . F 6 HOH A 170 671 671 HOH HOH . F 6 HOH A 171 672 672 HOH HOH . F 6 HOH A 172 673 673 HOH HOH . F 6 HOH A 173 674 674 HOH HOH . F 6 HOH A 174 675 675 HOH HOH . F 6 HOH A 175 676 676 HOH HOH . F 6 HOH A 176 677 677 HOH HOH . F 6 HOH A 177 678 678 HOH HOH . F 6 HOH A 178 679 679 HOH HOH . F 6 HOH A 179 680 680 HOH HOH . F 6 HOH A 180 681 681 HOH HOH . F 6 HOH A 181 682 682 HOH HOH . F 6 HOH A 182 683 683 HOH HOH . F 6 HOH A 183 684 684 HOH HOH . F 6 HOH A 184 685 685 HOH HOH . F 6 HOH A 185 686 686 HOH HOH . F 6 HOH A 186 687 687 HOH HOH . F 6 HOH A 187 688 688 HOH HOH . F 6 HOH A 188 689 689 HOH HOH . F 6 HOH A 189 690 690 HOH HOH . F 6 HOH A 190 691 691 HOH HOH . F 6 HOH A 191 692 692 HOH HOH . F 6 HOH A 192 693 693 HOH HOH . F 6 HOH A 193 694 694 HOH HOH . F 6 HOH A 194 695 695 HOH HOH . F 6 HOH A 195 696 696 HOH HOH . F 6 HOH A 196 697 697 HOH HOH . F 6 HOH A 197 698 698 HOH HOH . F 6 HOH A 198 699 699 HOH HOH . F 6 HOH A 199 700 700 HOH HOH . F 6 HOH A 200 701 701 HOH HOH . F 6 HOH A 201 702 702 HOH HOH . F 6 HOH A 202 703 703 HOH HOH . F 6 HOH A 203 704 704 HOH HOH . F 6 HOH A 204 705 705 HOH HOH . F 6 HOH A 205 706 706 HOH HOH . F 6 HOH A 206 707 707 HOH HOH . F 6 HOH A 207 708 708 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . D 4 7.065 23.324 49.266 1 27.57 ? N NO3 501 A 1 HETATM 2 O O1 NO3 . . . D 4 7.341 22.3 48.669 1 29.04 ? O1 NO3 501 A 1 HETATM 3 O O2 NO3 . . . D 4 7.406 23.461 50.423 1 29.98 ? O2 NO3 501 A 1 HETATM 4 O O3 NO3 . . . D 4 6.444 24.207 48.709 1 29.14 ? O3 NO3 501 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #