data_3BAY
#
_model_server_result.job_id            VkPIiMPBIozAyCv0JCHiUg 
_model_server_result.datetime_utc      '2024-11-27 01:06:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3bay 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    3BAY 
#
_exptl.entry_id    3BAY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.005 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3BAY 
_cell.length_a            52.227 
_cell.length_b            68.889 
_cell.length_c            131.191 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BAY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 A SG CYS 86 A CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 70 A CYS 70 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf3 A SG CYS 141 A CYS 141 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 378 A CYS 378 1_555 A SG CYS 384 A CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf5 A SG CYS 450 A CYS 450 1_555 A SG CYS 462 A CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 A C PCA 1 A PCA 1 1_555 A N TYR 2 A TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A ND2 ASN 461 A ASN 461 1_555 B C1 NAG . A NAG 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.476 ? 
metalc ? metalc1 A OD1 ASN 100 A ASN 100 1_555 D CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc2 A O ARG 158 A ARG 158 1_555 D CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? 
metalc ? metalc3 A OD1 ASP 167 A ASP 167 1_555 D CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? 
metalc ? metalc4 A OD2 ASP 167 A ASP 167 1_555 D CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? 
metalc ? metalc5 A O HIS 201 A HIS 201 1_555 D CA CA . A CA 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc6 D CA CA . A CA 498 1_555 F O HOH . A HOH 556 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
#
_chem_comp.formula           'N O3 -1' 
_chem_comp.formula_weight    62.005 
_chem_comp.id                NO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO3 doub 379 n n 
N O2 NO3 sing 380 n n 
N O3 NO3 sing 381 n n 
#
_atom_sites.entry_id                     3BAY 
_atom_sites.fract_transf_matrix[1][1]    0.019147 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014516 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007622 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 497 497 NAG NAG . 
C 3 ARE A 1 500 500 ARE ACB . 
D 4 CA A 1 498 498 CA CA2 . 
E 5 NO3 A 1 501 501 NO3 NO3 . 
F 6 HOH A 1 502 1 HOH HOH . 
F 6 HOH A 2 503 2 HOH HOH . 
F 6 HOH A 3 504 3 HOH HOH . 
F 6 HOH A 4 505 4 HOH HOH . 
F 6 HOH A 5 506 5 HOH HOH . 
F 6 HOH A 6 507 6 HOH HOH . 
F 6 HOH A 7 508 7 HOH HOH . 
F 6 HOH A 8 509 8 HOH HOH . 
F 6 HOH A 9 510 9 HOH HOH . 
F 6 HOH A 10 511 10 HOH HOH . 
F 6 HOH A 11 512 11 HOH HOH . 
F 6 HOH A 12 513 12 HOH HOH . 
F 6 HOH A 13 514 13 HOH HOH . 
F 6 HOH A 14 515 14 HOH HOH . 
F 6 HOH A 15 516 15 HOH HOH . 
F 6 HOH A 16 517 16 HOH HOH . 
F 6 HOH A 17 518 17 HOH HOH . 
F 6 HOH A 18 519 18 HOH HOH . 
F 6 HOH A 19 520 19 HOH HOH . 
F 6 HOH A 20 521 20 HOH HOH . 
F 6 HOH A 21 522 21 HOH HOH . 
F 6 HOH A 22 523 22 HOH HOH . 
F 6 HOH A 23 524 23 HOH HOH . 
F 6 HOH A 24 525 24 HOH HOH . 
F 6 HOH A 25 526 25 HOH HOH . 
F 6 HOH A 26 527 26 HOH HOH . 
F 6 HOH A 27 528 27 HOH HOH . 
F 6 HOH A 28 529 28 HOH HOH . 
F 6 HOH A 29 530 29 HOH HOH . 
F 6 HOH A 30 531 30 HOH HOH . 
F 6 HOH A 31 532 31 HOH HOH . 
F 6 HOH A 32 533 32 HOH HOH . 
F 6 HOH A 33 534 33 HOH HOH . 
F 6 HOH A 34 535 34 HOH HOH . 
F 6 HOH A 35 536 35 HOH HOH . 
F 6 HOH A 36 537 36 HOH HOH . 
F 6 HOH A 37 538 37 HOH HOH . 
F 6 HOH A 38 539 38 HOH HOH . 
F 6 HOH A 39 540 39 HOH HOH . 
F 6 HOH A 40 541 40 HOH HOH . 
F 6 HOH A 41 542 41 HOH HOH . 
F 6 HOH A 42 543 42 HOH HOH . 
F 6 HOH A 43 544 43 HOH HOH . 
F 6 HOH A 44 545 44 HOH HOH . 
F 6 HOH A 45 546 45 HOH HOH . 
F 6 HOH A 46 547 46 HOH HOH . 
F 6 HOH A 47 548 47 HOH HOH . 
F 6 HOH A 48 549 48 HOH HOH . 
F 6 HOH A 49 550 49 HOH HOH . 
F 6 HOH A 50 551 50 HOH HOH . 
F 6 HOH A 51 552 51 HOH HOH . 
F 6 HOH A 52 553 52 HOH HOH . 
F 6 HOH A 53 554 53 HOH HOH . 
F 6 HOH A 54 555 54 HOH HOH . 
F 6 HOH A 55 556 55 HOH HOH . 
F 6 HOH A 56 557 56 HOH HOH . 
F 6 HOH A 57 558 57 HOH HOH . 
F 6 HOH A 58 559 58 HOH HOH . 
F 6 HOH A 59 560 59 HOH HOH . 
F 6 HOH A 60 561 60 HOH HOH . 
F 6 HOH A 61 562 61 HOH HOH . 
F 6 HOH A 62 563 62 HOH HOH . 
F 6 HOH A 63 564 63 HOH HOH . 
F 6 HOH A 64 565 65 HOH HOH . 
F 6 HOH A 65 566 66 HOH HOH . 
F 6 HOH A 66 567 67 HOH HOH . 
F 6 HOH A 67 568 68 HOH HOH . 
F 6 HOH A 68 569 69 HOH HOH . 
F 6 HOH A 69 570 70 HOH HOH . 
F 6 HOH A 70 571 71 HOH HOH . 
F 6 HOH A 71 572 72 HOH HOH . 
F 6 HOH A 72 573 73 HOH HOH . 
F 6 HOH A 73 574 74 HOH HOH . 
F 6 HOH A 74 575 75 HOH HOH . 
F 6 HOH A 75 576 76 HOH HOH . 
F 6 HOH A 76 577 77 HOH HOH . 
F 6 HOH A 77 578 78 HOH HOH . 
F 6 HOH A 78 579 79 HOH HOH . 
F 6 HOH A 79 580 80 HOH HOH . 
F 6 HOH A 80 581 81 HOH HOH . 
F 6 HOH A 81 582 82 HOH HOH . 
F 6 HOH A 82 583 83 HOH HOH . 
F 6 HOH A 83 584 84 HOH HOH . 
F 6 HOH A 84 585 85 HOH HOH . 
F 6 HOH A 85 586 86 HOH HOH . 
F 6 HOH A 86 587 87 HOH HOH . 
F 6 HOH A 87 588 88 HOH HOH . 
F 6 HOH A 88 589 89 HOH HOH . 
F 6 HOH A 89 590 90 HOH HOH . 
F 6 HOH A 90 591 91 HOH HOH . 
F 6 HOH A 91 592 92 HOH HOH . 
F 6 HOH A 92 593 93 HOH HOH . 
F 6 HOH A 93 594 94 HOH HOH . 
F 6 HOH A 94 595 95 HOH HOH . 
F 6 HOH A 95 596 96 HOH HOH . 
F 6 HOH A 96 597 97 HOH HOH . 
F 6 HOH A 97 598 98 HOH HOH . 
F 6 HOH A 98 599 99 HOH HOH . 
F 6 HOH A 99 600 100 HOH HOH . 
F 6 HOH A 100 601 101 HOH HOH . 
F 6 HOH A 101 602 102 HOH HOH . 
F 6 HOH A 102 603 103 HOH HOH . 
F 6 HOH A 103 604 104 HOH HOH . 
F 6 HOH A 104 605 105 HOH HOH . 
F 6 HOH A 105 606 106 HOH HOH . 
F 6 HOH A 106 607 107 HOH HOH . 
F 6 HOH A 107 608 108 HOH HOH . 
F 6 HOH A 108 609 109 HOH HOH . 
F 6 HOH A 109 610 110 HOH HOH . 
F 6 HOH A 110 611 111 HOH HOH . 
F 6 HOH A 111 612 112 HOH HOH . 
F 6 HOH A 112 613 113 HOH HOH . 
F 6 HOH A 113 614 114 HOH HOH . 
F 6 HOH A 114 615 115 HOH HOH . 
F 6 HOH A 115 616 116 HOH HOH . 
F 6 HOH A 116 617 117 HOH HOH . 
F 6 HOH A 117 618 118 HOH HOH . 
F 6 HOH A 118 619 119 HOH HOH . 
F 6 HOH A 119 620 120 HOH HOH . 
F 6 HOH A 120 621 121 HOH HOH . 
F 6 HOH A 121 622 122 HOH HOH . 
F 6 HOH A 122 623 123 HOH HOH . 
F 6 HOH A 123 624 124 HOH HOH . 
F 6 HOH A 124 625 125 HOH HOH . 
F 6 HOH A 125 626 126 HOH HOH . 
F 6 HOH A 126 627 127 HOH HOH . 
F 6 HOH A 127 628 128 HOH HOH . 
F 6 HOH A 128 629 129 HOH HOH . 
F 6 HOH A 129 630 130 HOH HOH . 
F 6 HOH A 130 631 131 HOH HOH . 
F 6 HOH A 131 632 132 HOH HOH . 
F 6 HOH A 132 633 133 HOH HOH . 
F 6 HOH A 133 634 134 HOH HOH . 
F 6 HOH A 134 635 135 HOH HOH . 
F 6 HOH A 135 636 136 HOH HOH . 
F 6 HOH A 136 637 137 HOH HOH . 
F 6 HOH A 137 638 138 HOH HOH . 
F 6 HOH A 138 639 139 HOH HOH . 
F 6 HOH A 139 640 140 HOH HOH . 
F 6 HOH A 140 641 141 HOH HOH . 
F 6 HOH A 141 642 142 HOH HOH . 
F 6 HOH A 142 643 143 HOH HOH . 
F 6 HOH A 143 644 144 HOH HOH . 
F 6 HOH A 144 645 145 HOH HOH . 
F 6 HOH A 145 646 146 HOH HOH . 
F 6 HOH A 146 647 147 HOH HOH . 
F 6 HOH A 147 648 148 HOH HOH . 
F 6 HOH A 148 649 149 HOH HOH . 
F 6 HOH A 149 650 150 HOH HOH . 
F 6 HOH A 150 651 151 HOH HOH . 
F 6 HOH A 151 652 152 HOH HOH . 
F 6 HOH A 152 653 153 HOH HOH . 
F 6 HOH A 153 654 154 HOH HOH . 
F 6 HOH A 154 655 155 HOH HOH . 
F 6 HOH A 155 656 156 HOH HOH . 
F 6 HOH A 156 657 157 HOH HOH . 
F 6 HOH A 157 658 158 HOH HOH . 
F 6 HOH A 158 659 159 HOH HOH . 
F 6 HOH A 159 660 160 HOH HOH . 
F 6 HOH A 160 661 161 HOH HOH . 
F 6 HOH A 161 662 162 HOH HOH . 
F 6 HOH A 162 663 163 HOH HOH . 
F 6 HOH A 163 664 164 HOH HOH . 
F 6 HOH A 164 665 165 HOH HOH . 
F 6 HOH A 165 666 166 HOH HOH . 
F 6 HOH A 166 667 167 HOH HOH . 
F 6 HOH A 167 668 168 HOH HOH . 
F 6 HOH A 168 669 169 HOH HOH . 
F 6 HOH A 169 670 170 HOH HOH . 
F 6 HOH A 170 671 171 HOH HOH . 
F 6 HOH A 171 672 172 HOH HOH . 
F 6 HOH A 172 673 173 HOH HOH . 
F 6 HOH A 173 674 174 HOH HOH . 
F 6 HOH A 174 675 175 HOH HOH . 
F 6 HOH A 175 676 176 HOH HOH . 
F 6 HOH A 176 677 177 HOH HOH . 
F 6 HOH A 177 678 178 HOH HOH . 
F 6 HOH A 178 679 179 HOH HOH . 
F 6 HOH A 179 680 180 HOH HOH . 
F 6 HOH A 180 681 181 HOH HOH . 
F 6 HOH A 181 682 182 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO3 . . . E 5 7.432 23.195 48.257 1 26.71 ? N NO3 501 A 1 
HETATM 2 O O1 NO3 . . . E 5 7.5 21.981 48.195 1 39.55 ? O1 NO3 501 A 1 
HETATM 3 O O2 NO3 . . . E 5 8.44 23.839 48.412 1 36.86 ? O2 NO3 501 A 1 
HETATM 4 O O3 NO3 . . . E 5 6.354 23.76 48.159 1 37.42 ? O3 NO3 501 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#