data_3BBL
#
_model_server_result.job_id            ZWuDlkh49-y3QCn4-lkU9Q 
_model_server_result.datetime_utc      '2024-11-29 13:51:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3bbl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":500}' 
#
_entry.id    3BBL 
#
_exptl.entry_id    3BBL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3BBL 
_cell.length_a            122.55 
_cell.length_b            122.55 
_cell.length_c            123.301 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BBL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA hexameric 6 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1,2 
A,B,C,D,E,F 2 1,3,4,2,5,6 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 61.275 106.131413 61.6505 
3 'crystal symmetry operation' 2_645 -y+1,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 183.825 -106.131413 0 
4 'crystal symmetry operation' 3_765 -x+y+2,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 183.825 106.131413 0 
5 'crystal symmetry operation' 11_755 -x+y+2,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 245.1 0 61.6505 
6 'crystal symmetry operation' 12_545 x,x-y-1,-z+1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 61.275 -106.131413 61.6505 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PHE 5 A PHE 64 1_555 A N MSE 6 A MSE 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C MSE 6 A MSE 65 1_555 A N ILE 7 A ILE 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A C SER 29 A SER 88 1_555 A N MSE 30 A MSE 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale4 A C MSE 30 A MSE 89 1_555 A N VAL 31 A VAL 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 A C ALA 150 A ALA 209 1_555 A N MSE 151 A MSE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale6 A C MSE 151 A MSE 210 1_555 A N GLN 152 A GLN 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale7 A C ALA 175 A ALA 234 1_555 A N MSE 176 A MSE 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale8 A C MSE 176 A MSE 235 1_555 A N THR 177 A THR 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale9 A C ILE 192 A ILE 251 1_555 A N MSE 193 A MSE 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale10 A C MSE 193 A MSE 252 1_555 A N THR 194 A THR 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale11 A C THR 198 A THR 257 1_555 A N MSE 199 A MSE 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale12 A C MSE 199 A MSE 258 1_555 A N ALA 200 A ALA 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale13 A C ALA 203 A ALA 262 1_555 A N MSE 204 A MSE 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale14 A C MSE 204 A MSE 263 1_555 A N ALA 205 A ALA 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale15 A C PRO 227 A PRO 286 1_555 A N MSE 228 A MSE 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale16 A C MSE 228 A MSE 287 1_555 A N VAL 229 A VAL 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3BBL 
_atom_sites.fract_transf_matrix[1][1]    0.00816 
_atom_sites.fract_transf_matrix[1][2]    0.004711 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009422 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00811 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 500 500 EDO EDO . 
C 2 EDO A 1 501 501 EDO EDO . 
D 2 EDO A 1 502 502 EDO EDO . 
E 2 EDO A 1 503 503 EDO EDO . 
F 3 HOH A 1 504 504 HOH HOH . 
F 3 HOH A 2 505 505 HOH HOH . 
F 3 HOH A 3 506 506 HOH HOH . 
F 3 HOH A 4 507 507 HOH HOH . 
F 3 HOH A 5 508 508 HOH HOH . 
F 3 HOH A 6 509 509 HOH HOH . 
F 3 HOH A 7 510 510 HOH HOH . 
F 3 HOH A 8 511 511 HOH HOH . 
F 3 HOH A 9 512 512 HOH HOH . 
F 3 HOH A 10 513 513 HOH HOH . 
F 3 HOH A 11 514 514 HOH HOH . 
F 3 HOH A 12 515 515 HOH HOH . 
F 3 HOH A 13 516 516 HOH HOH . 
F 3 HOH A 14 517 517 HOH HOH . 
F 3 HOH A 15 518 518 HOH HOH . 
F 3 HOH A 16 519 519 HOH HOH . 
F 3 HOH A 17 520 520 HOH HOH . 
F 3 HOH A 18 521 521 HOH HOH . 
F 3 HOH A 19 522 522 HOH HOH . 
F 3 HOH A 20 523 523 HOH HOH . 
F 3 HOH A 21 524 524 HOH HOH . 
F 3 HOH A 22 525 525 HOH HOH . 
F 3 HOH A 23 526 526 HOH HOH . 
F 3 HOH A 24 527 527 HOH HOH . 
F 3 HOH A 25 528 528 HOH HOH . 
F 3 HOH A 26 529 529 HOH HOH . 
F 3 HOH A 27 530 530 HOH HOH . 
F 3 HOH A 28 531 531 HOH HOH . 
F 3 HOH A 29 532 532 HOH HOH . 
F 3 HOH A 30 533 533 HOH HOH . 
F 3 HOH A 31 534 534 HOH HOH . 
F 3 HOH A 32 535 535 HOH HOH . 
F 3 HOH A 33 536 536 HOH HOH . 
F 3 HOH A 34 537 537 HOH HOH . 
F 3 HOH A 35 538 538 HOH HOH . 
F 3 HOH A 36 539 539 HOH HOH . 
F 3 HOH A 37 540 540 HOH HOH . 
F 3 HOH A 38 541 541 HOH HOH . 
F 3 HOH A 39 542 542 HOH HOH . 
F 3 HOH A 40 543 543 HOH HOH . 
F 3 HOH A 41 544 544 HOH HOH . 
F 3 HOH A 42 545 545 HOH HOH . 
F 3 HOH A 43 546 546 HOH HOH . 
F 3 HOH A 44 547 547 HOH HOH . 
F 3 HOH A 45 548 548 HOH HOH . 
F 3 HOH A 46 549 549 HOH HOH . 
F 3 HOH A 47 550 550 HOH HOH . 
F 3 HOH A 48 551 551 HOH HOH . 
F 3 HOH A 49 552 552 HOH HOH . 
F 3 HOH A 50 553 553 HOH HOH . 
F 3 HOH A 51 554 554 HOH HOH . 
F 3 HOH A 52 555 555 HOH HOH . 
F 3 HOH A 53 556 556 HOH HOH . 
F 3 HOH A 54 557 557 HOH HOH . 
F 3 HOH A 55 558 558 HOH HOH . 
F 3 HOH A 56 559 559 HOH HOH . 
F 3 HOH A 57 560 560 HOH HOH . 
F 3 HOH A 58 561 561 HOH HOH . 
F 3 HOH A 59 562 562 HOH HOH . 
F 3 HOH A 60 563 563 HOH HOH . 
F 3 HOH A 61 564 564 HOH HOH . 
F 3 HOH A 62 565 565 HOH HOH . 
F 3 HOH A 63 566 566 HOH HOH . 
F 3 HOH A 64 567 567 HOH HOH . 
F 3 HOH A 65 568 568 HOH HOH . 
F 3 HOH A 66 569 569 HOH HOH . 
F 3 HOH A 67 570 570 HOH HOH . 
F 3 HOH A 68 571 571 HOH HOH . 
F 3 HOH A 69 572 572 HOH HOH . 
F 3 HOH A 70 573 573 HOH HOH . 
F 3 HOH A 71 574 574 HOH HOH . 
F 3 HOH A 72 575 575 HOH HOH . 
F 3 HOH A 73 576 576 HOH HOH . 
F 3 HOH A 74 577 577 HOH HOH . 
F 3 HOH A 75 578 578 HOH HOH . 
F 3 HOH A 76 579 579 HOH HOH . 
F 3 HOH A 77 580 580 HOH HOH . 
F 3 HOH A 78 581 581 HOH HOH . 
F 3 HOH A 79 582 582 HOH HOH . 
F 3 HOH A 80 583 583 HOH HOH . 
F 3 HOH A 81 584 584 HOH HOH . 
F 3 HOH A 82 585 585 HOH HOH . 
F 3 HOH A 83 586 586 HOH HOH . 
F 3 HOH A 84 587 587 HOH HOH . 
F 3 HOH A 85 588 588 HOH HOH . 
F 3 HOH A 86 589 589 HOH HOH . 
F 3 HOH A 87 590 590 HOH HOH . 
F 3 HOH A 88 591 591 HOH HOH . 
F 3 HOH A 89 592 592 HOH HOH . 
F 3 HOH A 90 593 593 HOH HOH . 
F 3 HOH A 91 594 594 HOH HOH . 
F 3 HOH A 92 595 595 HOH HOH . 
F 3 HOH A 93 596 596 HOH HOH . 
F 3 HOH A 94 597 597 HOH HOH . 
F 3 HOH A 95 598 598 HOH HOH . 
F 3 HOH A 96 599 599 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 79.01 15.41 29.116 1 24.86 ? C1 EDO 500 A 1 
HETATM 2 O O1 EDO . . . B 2 78.603 14.388 28.214 1 28.72 ? O1 EDO 500 A 1 
HETATM 3 C C2 EDO . . . B 2 79.637 16.578 28.34 1 25.88 ? C2 EDO 500 A 1 
HETATM 4 O O2 EDO . . . B 2 79.234 16.567 26.963 1 22.7 ? O2 EDO 500 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           4 
#