data_3BC4
#
_model_server_result.job_id            irqu0Bx2YO09VMy7JXIQ3A 
_model_server_result.datetime_utc      '2025-01-10 12:48:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3bc4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":2501}' 
#
_entry.id    3BC4 
#
_exptl.entry_id    3BC4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              229.274 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-aminoethyl naphthalen-1-ylacetate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3BC4 
_cell.length_a            46.299 
_cell.length_b            46.299 
_cell.length_c            101.404 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BC4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C14 H15 N O2' 
_chem_comp.formula_weight    229.274 
_chem_comp.id                LLG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-aminoethyl naphthalen-1-ylacetate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C5 LLG sing 203 n n 
C4 C5 LLG sing 204 n n 
C4 O6 LLG sing 205 n n 
C6 C7 LLG sing 206 n n 
C6 C15 LLG sing 207 n n 
C7 O6 LLG sing 208 n n 
C7 O8 LLG doub 209 n n 
C10 C9 LLG doub 210 n y 
C10 C11 LLG sing 211 n y 
C13 C18 LLG doub 212 n y 
C13 C14 LLG sing 213 n y 
C13 C12 LLG sing 214 n y 
C15 C16 LLG sing 215 n y 
C15 C14 LLG doub 216 n y 
C17 C16 LLG doub 217 n y 
C17 C18 LLG sing 218 n y 
C14 C9 LLG sing 219 n y 
C11 C12 LLG doub 220 n y 
N1 HN1 LLG sing 221 n n 
N1 HN1A LLG sing 222 n n 
C4 H4 LLG sing 223 n n 
C4 H4A LLG sing 224 n n 
C5 H5 LLG sing 225 n n 
C5 H5A LLG sing 226 n n 
C6 H6 LLG sing 227 n n 
C6 H6A LLG sing 228 n n 
C10 H10 LLG sing 229 n n 
C17 H17 LLG sing 230 n n 
C16 H16 LLG sing 231 n n 
C18 H18 LLG sing 232 n n 
C9 H9 LLG sing 233 n n 
C11 H11 LLG sing 234 n n 
C12 H12 LLG sing 235 n n 
#
_atom_sites.entry_id                     3BC4 
_atom_sites.fract_transf_matrix[1][1]    0.021599 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021599 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009862 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 LLG A 1 2501 2501 LLG LIG . 
C 2 LLG A 1 2502 2502 LLG LIG . 
D 3 DMS A 1 2601 2601 DMS DMS . 
E 4 HOH A 1 3001 3001 HOH HOH . 
E 4 HOH A 2 3002 3002 HOH HOH . 
E 4 HOH A 3 3003 3003 HOH HOH . 
E 4 HOH A 4 3004 3004 HOH HOH . 
E 4 HOH A 5 3005 3005 HOH HOH . 
E 4 HOH A 6 3006 3006 HOH HOH . 
E 4 HOH A 7 3007 3007 HOH HOH . 
E 4 HOH A 8 3008 3008 HOH HOH . 
E 4 HOH A 9 3009 3009 HOH HOH . 
E 4 HOH A 10 3010 3010 HOH HOH . 
E 4 HOH A 11 3011 3011 HOH HOH . 
E 4 HOH A 12 3012 3012 HOH HOH . 
E 4 HOH A 13 3013 3013 HOH HOH . 
E 4 HOH A 14 3014 3014 HOH HOH . 
E 4 HOH A 15 3015 3015 HOH HOH . 
E 4 HOH A 16 3016 3016 HOH HOH . 
E 4 HOH A 17 3017 3017 HOH HOH . 
E 4 HOH A 18 3018 3018 HOH HOH . 
E 4 HOH A 19 3019 3019 HOH HOH . 
E 4 HOH A 20 3020 3020 HOH HOH . 
E 4 HOH A 21 3021 3021 HOH HOH . 
E 4 HOH A 22 3022 3022 HOH HOH . 
E 4 HOH A 23 3023 3023 HOH HOH . 
E 4 HOH A 24 3024 3024 HOH HOH . 
E 4 HOH A 25 3025 3025 HOH HOH . 
E 4 HOH A 26 3026 3026 HOH HOH . 
E 4 HOH A 27 3027 3027 HOH HOH . 
E 4 HOH A 28 3028 3028 HOH HOH . 
E 4 HOH A 29 3029 3029 HOH HOH . 
E 4 HOH A 30 3030 3030 HOH HOH . 
E 4 HOH A 31 3031 3031 HOH HOH . 
E 4 HOH A 32 3032 3032 HOH HOH . 
E 4 HOH A 33 3033 3033 HOH HOH . 
E 4 HOH A 34 3034 3034 HOH HOH . 
E 4 HOH A 35 3035 3035 HOH HOH . 
E 4 HOH A 36 3036 3036 HOH HOH . 
E 4 HOH A 37 3037 3037 HOH HOH . 
E 4 HOH A 38 3038 3038 HOH HOH . 
E 4 HOH A 39 3039 3039 HOH HOH . 
E 4 HOH A 40 3040 3040 HOH HOH . 
E 4 HOH A 41 3041 3041 HOH HOH . 
E 4 HOH A 42 3042 3042 HOH HOH . 
E 4 HOH A 43 3043 3043 HOH HOH . 
E 4 HOH A 44 3044 3044 HOH HOH . 
E 4 HOH A 45 3045 3045 HOH HOH . 
E 4 HOH A 46 3046 3046 HOH HOH . 
E 4 HOH A 47 3047 3047 HOH HOH . 
E 4 HOH A 48 3048 3048 HOH HOH . 
E 4 HOH A 49 3049 3049 HOH HOH . 
E 4 HOH A 50 3050 3050 HOH HOH . 
E 4 HOH A 51 3051 3051 HOH HOH . 
E 4 HOH A 52 3052 3052 HOH HOH . 
E 4 HOH A 53 3053 3053 HOH HOH . 
E 4 HOH A 54 3054 3054 HOH HOH . 
E 4 HOH A 55 3055 3055 HOH HOH . 
E 4 HOH A 56 3056 3056 HOH HOH . 
E 4 HOH A 57 3057 3057 HOH HOH . 
E 4 HOH A 58 3058 3058 HOH HOH . 
E 4 HOH A 59 3059 3059 HOH HOH . 
E 4 HOH A 60 3060 3060 HOH HOH . 
E 4 HOH A 61 3061 3061 HOH HOH . 
E 4 HOH A 62 3062 3062 HOH HOH . 
E 4 HOH A 63 3063 3063 HOH HOH . 
E 4 HOH A 64 3064 3064 HOH HOH . 
E 4 HOH A 65 3065 3065 HOH HOH . 
E 4 HOH A 66 3066 3066 HOH HOH . 
E 4 HOH A 67 3067 3067 HOH HOH . 
E 4 HOH A 68 3068 3068 HOH HOH . 
E 4 HOH A 69 3069 3069 HOH HOH . 
E 4 HOH A 70 3070 3070 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 LLG . . . B 2 6.01 6.01 0 0.5 25.87 ? N1 LLG 2501 A 1 
HETATM 2 C C4 LLG . . . B 2 7.189 7.965 -0.542 1 25.62 ? C4 LLG 2501 A 1 
HETATM 3 C C5 LLG . . . B 2 5.779 7.385 -0.452 1 28.64 ? C5 LLG 2501 A 1 
HETATM 4 C C6 LLG . . . B 2 8.556 7.754 -4.118 1 34.21 ? C6 LLG 2501 A 1 
HETATM 5 C C7 LLG . . . B 2 8.053 8.252 -2.768 1 37.61 ? C7 LLG 2501 A 1 
HETATM 6 C C10 LLG . . . B 2 12.398 9.294 -2.608 1 26.36 ? C10 LLG 2501 A 1 
HETATM 7 C C13 LLG . . . B 2 11.214 10.463 -4.983 1 21.28 ? C13 LLG 2501 A 1 
HETATM 8 C C15 LLG . . . B 2 9.302 8.859 -4.897 1 30.59 ? C15 LLG 2501 A 1 
HETATM 9 C C17 LLG . . . B 2 9.41 10.612 -6.684 1 30.29 ? C17 LLG 2501 A 1 
HETATM 10 O O6 LLG . . . B 2 7.693 7.425 -1.77 1 33.75 ? O6 LLG 2501 A 1 
HETATM 11 C C16 LLG . . . B 2 8.725 9.487 -6.014 1 27.63 ? C16 LLG 2501 A 1 
HETATM 12 C C18 LLG . . . B 2 10.636 11.061 -6.204 1 31.46 ? C18 LLG 2501 A 1 
HETATM 13 C C14 LLG . . . B 2 10.532 9.443 -4.282 1 20.28 ? C14 LLG 2501 A 1 
HETATM 14 C C9 LLG . . . B 2 11.181 8.803 -3.11 1 25.06 ? C9 LLG 2501 A 1 
HETATM 15 C C11 LLG . . . B 2 13.061 10.418 -3.306 1 25.6 ? C11 LLG 2501 A 1 
HETATM 16 C C12 LLG . . . B 2 12.496 10.991 -4.449 1 27.14 ? C12 LLG 2501 A 1 
HETATM 17 O O8 LLG . . . B 2 7.975 9.452 -2.581 1 43 ? O8 LLG 2501 A 1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           17 
#