data_3BCM # _model_server_result.job_id pxpJjOmcDre_Ko9zWN6ySA _model_server_result.datetime_utc '2024-10-19 19:45:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bcm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":125}' # _entry.id 3BCM # _exptl.entry_id 3BCM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.02 _cell.angle_gamma 90 _cell.entry_id 3BCM _cell.length_a 48.513 _cell.length_b 59.508 _cell.length_c 49.738 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BCM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,C,D,E,G 2 1 B,F,H 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_646 -x+1,y-1/2,-z+1 -1 0 0 0 1 0 0 0 -1 25.147095 -29.754 43.907894 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? disulf ? disulf2 A SG CYS 31 A CYS 31 1_555 B SG CYS 32 B CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf3 A SG CYS 32 A CYS 32 1_555 B SG CYS 31 B CYS 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf4 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf5 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf6 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf7 B SG CYS 26 B CYS 26 1_555 B SG CYS 84 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf8 B SG CYS 40 B CYS 40 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf9 B SG CYS 58 B CYS 58 1_555 B SG CYS 110 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? disulf ? disulf10 B SG CYS 65 B CYS 65 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3BCM _atom_sites.fract_transf_matrix[1][1] 0.020613 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010969 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 125 125 PO4 PO4 . D 2 PO4 A 1 127 127 PO4 PO4 . E 2 PO4 A 1 128 128 PO4 PO4 . F 2 PO4 B 1 126 126 PO4 PO4 . G 3 HOH A 1 202 202 HOH HOH . G 3 HOH A 2 232 232 HOH HOH . G 3 HOH A 3 233 233 HOH HOH . G 3 HOH A 4 236 236 HOH HOH . G 3 HOH A 5 245 245 HOH HOH . G 3 HOH A 6 271 271 HOH HOH . G 3 HOH A 7 284 284 HOH HOH . G 3 HOH A 8 296 296 HOH HOH . G 3 HOH A 9 302 302 HOH HOH . G 3 HOH A 10 311 311 HOH HOH . G 3 HOH A 11 312 312 HOH HOH . G 3 HOH A 12 313 313 HOH HOH . G 3 HOH A 13 628 628 HOH HOH . G 3 HOH A 14 629 629 HOH HOH . G 3 HOH A 15 633 633 HOH HOH . G 3 HOH A 16 635 635 HOH HOH . G 3 HOH A 17 636 636 HOH HOH . G 3 HOH A 18 637 637 HOH HOH . G 3 HOH A 19 638 638 HOH HOH . G 3 HOH A 20 642 642 HOH HOH . G 3 HOH A 21 643 643 HOH HOH . G 3 HOH A 22 645 645 HOH HOH . G 3 HOH A 23 646 646 HOH HOH . G 3 HOH A 24 647 647 HOH HOH . G 3 HOH A 25 649 649 HOH HOH . G 3 HOH A 26 652 652 HOH HOH . G 3 HOH A 27 653 653 HOH HOH . G 3 HOH A 28 658 658 HOH HOH . G 3 HOH A 29 661 661 HOH HOH . G 3 HOH A 30 663 663 HOH HOH . G 3 HOH A 31 669 669 HOH HOH . G 3 HOH A 32 674 674 HOH HOH . G 3 HOH A 33 677 677 HOH HOH . G 3 HOH A 34 678 678 HOH HOH . G 3 HOH A 35 681 681 HOH HOH . G 3 HOH A 36 686 686 HOH HOH . G 3 HOH A 37 690 690 HOH HOH . G 3 HOH A 38 691 691 HOH HOH . G 3 HOH A 39 694 694 HOH HOH . G 3 HOH A 40 697 697 HOH HOH . G 3 HOH A 41 700 700 HOH HOH . G 3 HOH A 42 701 701 HOH HOH . G 3 HOH A 43 702 702 HOH HOH . G 3 HOH A 44 703 703 HOH HOH . G 3 HOH A 45 706 706 HOH HOH . G 3 HOH A 46 711 711 HOH HOH . G 3 HOH A 47 712 712 HOH HOH . G 3 HOH A 48 714 714 HOH HOH . G 3 HOH A 49 718 718 HOH HOH . G 3 HOH A 50 722 722 HOH HOH . G 3 HOH A 51 723 723 HOH HOH . G 3 HOH A 52 726 726 HOH HOH . G 3 HOH A 53 729 729 HOH HOH . G 3 HOH A 54 733 733 HOH HOH . G 3 HOH A 55 734 734 HOH HOH . G 3 HOH A 56 735 735 HOH HOH . G 3 HOH A 57 737 737 HOH HOH . G 3 HOH A 58 744 744 HOH HOH . G 3 HOH A 59 745 745 HOH HOH . G 3 HOH A 60 749 749 HOH HOH . G 3 HOH A 61 751 751 HOH HOH . G 3 HOH A 62 752 752 HOH HOH . G 3 HOH A 63 753 753 HOH HOH . G 3 HOH A 64 754 754 HOH HOH . G 3 HOH A 65 755 755 HOH HOH . G 3 HOH A 66 757 757 HOH HOH . G 3 HOH A 67 760 760 HOH HOH . G 3 HOH A 68 763 763 HOH HOH . G 3 HOH A 69 768 768 HOH HOH . G 3 HOH A 70 772 772 HOH HOH . G 3 HOH A 71 780 780 HOH HOH . H 3 HOH B 1 205 205 HOH HOH . H 3 HOH B 2 206 206 HOH HOH . H 3 HOH B 3 214 214 HOH HOH . H 3 HOH B 4 220 220 HOH HOH . H 3 HOH B 5 225 225 HOH HOH . H 3 HOH B 6 226 226 HOH HOH . H 3 HOH B 7 227 227 HOH HOH . H 3 HOH B 8 231 231 HOH HOH . H 3 HOH B 9 234 234 HOH HOH . H 3 HOH B 10 237 237 HOH HOH . H 3 HOH B 11 268 268 HOH HOH . H 3 HOH B 12 278 278 HOH HOH . H 3 HOH B 13 291 291 HOH HOH . H 3 HOH B 14 298 298 HOH HOH . H 3 HOH B 15 306 306 HOH HOH . H 3 HOH B 16 626 626 HOH HOH . H 3 HOH B 17 627 627 HOH HOH . H 3 HOH B 18 630 630 HOH HOH . H 3 HOH B 19 631 631 HOH HOH . H 3 HOH B 20 632 632 HOH HOH . H 3 HOH B 21 634 634 HOH HOH . H 3 HOH B 22 644 644 HOH HOH . H 3 HOH B 23 648 648 HOH HOH . H 3 HOH B 24 651 651 HOH HOH . H 3 HOH B 25 654 654 HOH HOH . H 3 HOH B 26 655 655 HOH HOH . H 3 HOH B 27 657 657 HOH HOH . H 3 HOH B 28 662 662 HOH HOH . H 3 HOH B 29 664 664 HOH HOH . H 3 HOH B 30 665 665 HOH HOH . H 3 HOH B 31 667 667 HOH HOH . H 3 HOH B 32 670 670 HOH HOH . H 3 HOH B 33 671 671 HOH HOH . H 3 HOH B 34 672 672 HOH HOH . H 3 HOH B 35 673 673 HOH HOH . H 3 HOH B 36 675 675 HOH HOH . H 3 HOH B 37 680 680 HOH HOH . H 3 HOH B 38 683 683 HOH HOH . H 3 HOH B 39 687 687 HOH HOH . H 3 HOH B 40 698 698 HOH HOH . H 3 HOH B 41 705 705 HOH HOH . H 3 HOH B 42 709 709 HOH HOH . H 3 HOH B 43 710 710 HOH HOH . H 3 HOH B 44 713 713 HOH HOH . H 3 HOH B 45 715 715 HOH HOH . H 3 HOH B 46 716 716 HOH HOH . H 3 HOH B 47 717 717 HOH HOH . H 3 HOH B 48 719 719 HOH HOH . H 3 HOH B 49 720 720 HOH HOH . H 3 HOH B 50 721 721 HOH HOH . H 3 HOH B 51 724 724 HOH HOH . H 3 HOH B 52 725 725 HOH HOH . H 3 HOH B 53 727 727 HOH HOH . H 3 HOH B 54 728 728 HOH HOH . H 3 HOH B 55 730 730 HOH HOH . H 3 HOH B 56 736 736 HOH HOH . H 3 HOH B 57 739 739 HOH HOH . H 3 HOH B 58 740 740 HOH HOH . H 3 HOH B 59 741 741 HOH HOH . H 3 HOH B 60 742 742 HOH HOH . H 3 HOH B 61 743 743 HOH HOH . H 3 HOH B 62 769 769 HOH HOH . H 3 HOH B 63 770 770 HOH HOH . H 3 HOH B 64 771 771 HOH HOH . H 3 HOH B 65 776 776 HOH HOH . H 3 HOH B 66 779 779 HOH HOH . H 3 HOH B 67 781 781 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 3.671 -12.238 11.764 1 21.26 ? P PO4 125 A 1 HETATM 2 O O1 PO4 . . . C 2 3.299 -11.417 10.579 1 18.71 ? O1 PO4 125 A 1 HETATM 3 O O2 PO4 . . . C 2 3.362 -11.5 12.982 1 23.15 ? O2 PO4 125 A 1 HETATM 4 O O3 PO4 . . . C 2 2.917 -13.471 11.775 1 22.87 ? O3 PO4 125 A 1 HETATM 5 O O4 PO4 . . . C 2 5.1 -12.537 11.71 1 19.47 ? O4 PO4 125 A 1 # _model_server_stats.io_time_ms 87 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #