data_3BCQ # _model_server_result.job_id 4jG_O1T4v5vZcnDTKaukgw _model_server_result.datetime_utc '2024-11-25 18:50:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bcq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":148}' # _entry.id 3BCQ # _exptl.entry_id 3BCQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 31.999 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXYGEN MOLECULE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.89 _cell.angle_gamma 90 _cell.entry_id 3BCQ _cell.length_a 119.366 _cell.length_b 54.039 _cell.length_c 101.906 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BCQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N ? 4 J N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 88 A HIS 88 1_555 E FE HEM . A HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc2 E FE HEM . A HEM 143 1_555 F O1 OXY . A OXY 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.497 ? metalc ? metalc3 E FE HEM . A HEM 143 1_555 F O2 OXY . A OXY 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc4 B NE2 HIS 92 B HIS 92 1_555 G FE HEM . B HEM 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc5 G FE HEM . B HEM 147 1_555 H O1 OXY . B OXY 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.61 ? metalc ? metalc6 G FE HEM . B HEM 147 1_555 H O2 OXY . B OXY 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc7 C NE2 HIS 88 C HIS 88 1_555 I FE HEM . C HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc8 I FE HEM . C HEM 143 1_555 J O1 OXY . C OXY 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc9 I FE HEM . C HEM 143 1_555 J O2 OXY . C OXY 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.796 ? metalc ? metalc10 D NE2 HIS 92 D HIS 92 1_555 K FE HEM . D HEM 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc11 K FE HEM . D HEM 147 1_555 L O1 OXY . D OXY 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc12 K FE HEM . D HEM 147 1_555 L O2 OXY . D OXY 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? # _chem_comp.formula O2 _chem_comp.formula_weight 31.999 _chem_comp.id OXY _chem_comp.mon_nstd_flag . _chem_comp.name 'OXYGEN MOLECULE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 O1 _chem_comp_bond.atom_id_2 O2 _chem_comp_bond.comp_id OXY _chem_comp_bond.value_order doub _chem_comp_bond.pdbx_ordinal 319 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 3BCQ _atom_sites.fract_transf_matrix[1][1] 0.008378 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003711 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018505 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010733 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 143 1 HEM HEM . F 4 OXY A 1 144 1 OXY OXY . G 3 HEM B 1 147 2 HEM HEM . H 4 OXY B 1 148 2 OXY OXY . I 3 HEM C 1 143 3 HEM HEM . J 4 OXY C 1 144 3 OXY OXY . K 3 HEM D 1 147 4 HEM HEM . L 4 OXY D 1 148 4 OXY OXY . M 5 HOH A 1 145 3 HOH HOH . M 5 HOH A 2 146 14 HOH HOH . M 5 HOH A 3 147 15 HOH HOH . M 5 HOH A 4 148 19 HOH HOH . M 5 HOH A 5 149 23 HOH HOH . M 5 HOH A 6 150 24 HOH HOH . M 5 HOH A 7 151 31 HOH HOH . M 5 HOH A 8 152 35 HOH HOH . M 5 HOH A 9 153 40 HOH HOH . M 5 HOH A 10 154 42 HOH HOH . M 5 HOH A 11 155 48 HOH HOH . M 5 HOH A 12 156 52 HOH HOH . M 5 HOH A 13 157 53 HOH HOH . M 5 HOH A 14 158 54 HOH HOH . M 5 HOH A 15 159 55 HOH HOH . M 5 HOH A 16 160 60 HOH HOH . M 5 HOH A 17 161 62 HOH HOH . M 5 HOH A 18 162 63 HOH HOH . M 5 HOH A 19 163 65 HOH HOH . M 5 HOH A 20 164 67 HOH HOH . M 5 HOH A 21 165 70 HOH HOH . M 5 HOH A 22 166 79 HOH HOH . M 5 HOH A 23 167 80 HOH HOH . M 5 HOH A 24 168 81 HOH HOH . M 5 HOH A 25 169 86 HOH HOH . M 5 HOH A 26 170 97 HOH HOH . M 5 HOH A 27 171 112 HOH HOH . M 5 HOH A 28 172 117 HOH HOH . M 5 HOH A 29 173 127 HOH HOH . M 5 HOH A 30 174 133 HOH HOH . M 5 HOH A 31 175 136 HOH HOH . N 5 HOH B 1 149 16 HOH HOH . N 5 HOH B 2 150 17 HOH HOH . N 5 HOH B 3 151 22 HOH HOH . N 5 HOH B 4 152 29 HOH HOH . N 5 HOH B 5 153 44 HOH HOH . N 5 HOH B 6 154 49 HOH HOH . N 5 HOH B 7 155 56 HOH HOH . N 5 HOH B 8 156 61 HOH HOH . N 5 HOH B 9 157 73 HOH HOH . N 5 HOH B 10 158 91 HOH HOH . N 5 HOH B 11 159 109 HOH HOH . N 5 HOH B 12 160 116 HOH HOH . N 5 HOH B 13 161 123 HOH HOH . O 5 HOH C 1 145 4 HOH HOH . O 5 HOH C 2 146 9 HOH HOH . O 5 HOH C 3 147 13 HOH HOH . O 5 HOH C 4 148 18 HOH HOH . O 5 HOH C 5 149 21 HOH HOH . O 5 HOH C 6 150 25 HOH HOH . O 5 HOH C 7 151 26 HOH HOH . O 5 HOH C 8 152 37 HOH HOH . O 5 HOH C 9 153 39 HOH HOH . O 5 HOH C 10 154 43 HOH HOH . O 5 HOH C 11 155 45 HOH HOH . O 5 HOH C 12 156 50 HOH HOH . O 5 HOH C 13 157 51 HOH HOH . O 5 HOH C 14 158 59 HOH HOH . O 5 HOH C 15 159 74 HOH HOH . O 5 HOH C 16 160 75 HOH HOH . O 5 HOH C 17 161 90 HOH HOH . O 5 HOH C 18 162 106 HOH HOH . O 5 HOH C 19 163 107 HOH HOH . O 5 HOH C 20 164 108 HOH HOH . O 5 HOH C 21 165 118 HOH HOH . O 5 HOH C 22 166 124 HOH HOH . O 5 HOH C 23 167 126 HOH HOH . O 5 HOH C 24 168 129 HOH HOH . O 5 HOH C 25 169 134 HOH HOH . P 5 HOH D 1 149 10 HOH HOH . P 5 HOH D 2 150 20 HOH HOH . P 5 HOH D 3 151 28 HOH HOH . P 5 HOH D 4 152 36 HOH HOH . P 5 HOH D 5 153 38 HOH HOH . P 5 HOH D 6 154 46 HOH HOH . P 5 HOH D 7 155 69 HOH HOH . P 5 HOH D 8 156 83 HOH HOH . P 5 HOH D 9 157 85 HOH HOH . P 5 HOH D 10 158 88 HOH HOH . P 5 HOH D 11 159 89 HOH HOH . P 5 HOH D 12 160 96 HOH HOH . P 5 HOH D 13 161 98 HOH HOH . P 5 HOH D 14 162 102 HOH HOH . P 5 HOH D 15 163 104 HOH HOH . P 5 HOH D 16 164 105 HOH HOH . P 5 HOH D 17 165 110 HOH HOH . P 5 HOH D 18 166 114 HOH HOH . P 5 HOH D 19 167 130 HOH HOH . P 5 HOH D 20 168 131 HOH HOH . P 5 HOH D 21 169 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 OXY . . . L 4 -10.579 -16.933 12.287 0.6 30.15 ? O1 OXY 148 D 1 HETATM 2 O O2 OXY . . . L 4 -10.388 -15.749 12.219 0.6 26.43 ? O2 OXY 148 D 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 2 #