data_3BD5
#
_model_server_result.job_id            9GqAL3ztAo31Pyx9qW-dKw 
_model_server_result.datetime_utc      '2025-03-06 03:13:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3bd5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":2}' 
#
_entry.id    3BD5 
#
_exptl.entry_id    3BD5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.933 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COBALT (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3BD5 
_cell.length_a            62.132 
_cell.length_b            62.132 
_cell.length_c            93.239 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BD5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
A,B,C,D,E,F,G 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 181 1_555 A SG CYS 93 A CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf2 B SG CYS 22 B CYS 181 1_555 B SG CYS 93 B CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
#
_chem_comp.formula           'Co 2' 
_chem_comp.formula_weight    58.933 
_chem_comp.id                CO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COBALT (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3BD5 
_atom_sites.fract_transf_matrix[1][1]    0.016095 
_atom_sites.fract_transf_matrix[1][2]    0.009292 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018585 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010725 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CO A 1 1 1 CO CO . 
D 3 BTB A 1 272 272 BTB BTB . 
E 2 CO B 1 2 2 CO CO . 
F 4 HOH A 1 273 273 HOH HOH . 
F 4 HOH A 2 274 274 HOH HOH . 
F 4 HOH A 3 275 275 HOH HOH . 
F 4 HOH A 4 276 276 HOH HOH . 
F 4 HOH A 5 277 277 HOH HOH . 
F 4 HOH A 6 278 278 HOH HOH . 
F 4 HOH A 7 279 279 HOH HOH . 
F 4 HOH A 8 280 280 HOH HOH . 
F 4 HOH A 9 281 281 HOH HOH . 
F 4 HOH A 10 282 282 HOH HOH . 
F 4 HOH A 11 283 283 HOH HOH . 
F 4 HOH A 12 284 284 HOH HOH . 
F 4 HOH A 13 285 285 HOH HOH . 
F 4 HOH A 14 286 286 HOH HOH . 
F 4 HOH A 15 287 287 HOH HOH . 
F 4 HOH A 16 288 288 HOH HOH . 
F 4 HOH A 17 289 289 HOH HOH . 
F 4 HOH A 18 290 290 HOH HOH . 
F 4 HOH A 19 291 291 HOH HOH . 
F 4 HOH A 20 292 292 HOH HOH . 
F 4 HOH A 21 293 293 HOH HOH . 
F 4 HOH A 22 294 294 HOH HOH . 
F 4 HOH A 23 295 295 HOH HOH . 
F 4 HOH A 24 296 296 HOH HOH . 
F 4 HOH A 25 297 297 HOH HOH . 
F 4 HOH A 26 298 298 HOH HOH . 
F 4 HOH A 27 299 299 HOH HOH . 
F 4 HOH A 28 300 300 HOH HOH . 
F 4 HOH A 29 301 301 HOH HOH . 
F 4 HOH A 30 302 302 HOH HOH . 
F 4 HOH A 31 303 303 HOH HOH . 
F 4 HOH A 32 304 304 HOH HOH . 
F 4 HOH A 33 305 305 HOH HOH . 
F 4 HOH A 34 306 306 HOH HOH . 
F 4 HOH A 35 307 307 HOH HOH . 
F 4 HOH A 36 308 308 HOH HOH . 
F 4 HOH A 37 309 309 HOH HOH . 
F 4 HOH A 38 310 310 HOH HOH . 
F 4 HOH A 39 311 311 HOH HOH . 
F 4 HOH A 40 312 312 HOH HOH . 
F 4 HOH A 41 313 313 HOH HOH . 
F 4 HOH A 42 314 314 HOH HOH . 
F 4 HOH A 43 315 315 HOH HOH . 
F 4 HOH A 44 316 316 HOH HOH . 
F 4 HOH A 45 317 317 HOH HOH . 
F 4 HOH A 46 318 318 HOH HOH . 
F 4 HOH A 47 319 319 HOH HOH . 
F 4 HOH A 48 320 320 HOH HOH . 
F 4 HOH A 49 321 321 HOH HOH . 
F 4 HOH A 50 322 322 HOH HOH . 
F 4 HOH A 51 323 323 HOH HOH . 
F 4 HOH A 52 324 324 HOH HOH . 
F 4 HOH A 53 325 325 HOH HOH . 
F 4 HOH A 54 326 326 HOH HOH . 
F 4 HOH A 55 327 327 HOH HOH . 
F 4 HOH A 56 328 328 HOH HOH . 
F 4 HOH A 57 329 329 HOH HOH . 
F 4 HOH A 58 330 330 HOH HOH . 
F 4 HOH A 59 331 331 HOH HOH . 
F 4 HOH A 60 332 332 HOH HOH . 
F 4 HOH A 61 333 333 HOH HOH . 
F 4 HOH A 62 334 334 HOH HOH . 
F 4 HOH A 63 335 335 HOH HOH . 
F 4 HOH A 64 336 336 HOH HOH . 
F 4 HOH A 65 337 337 HOH HOH . 
F 4 HOH A 66 338 338 HOH HOH . 
F 4 HOH A 67 339 339 HOH HOH . 
F 4 HOH A 68 341 341 HOH HOH . 
F 4 HOH A 69 343 343 HOH HOH . 
F 4 HOH A 70 344 344 HOH HOH . 
F 4 HOH A 71 345 345 HOH HOH . 
F 4 HOH A 72 347 347 HOH HOH . 
F 4 HOH A 73 348 348 HOH HOH . 
F 4 HOH A 74 349 349 HOH HOH . 
F 4 HOH A 75 350 350 HOH HOH . 
F 4 HOH A 76 351 351 HOH HOH . 
G 4 HOH B 1 272 272 HOH HOH . 
G 4 HOH B 2 273 273 HOH HOH . 
G 4 HOH B 3 274 274 HOH HOH . 
G 4 HOH B 4 275 275 HOH HOH . 
G 4 HOH B 5 276 276 HOH HOH . 
G 4 HOH B 6 277 277 HOH HOH . 
G 4 HOH B 7 278 278 HOH HOH . 
G 4 HOH B 8 279 279 HOH HOH . 
G 4 HOH B 9 280 280 HOH HOH . 
G 4 HOH B 10 281 281 HOH HOH . 
G 4 HOH B 11 282 282 HOH HOH . 
G 4 HOH B 12 283 283 HOH HOH . 
G 4 HOH B 13 284 284 HOH HOH . 
G 4 HOH B 14 285 285 HOH HOH . 
G 4 HOH B 15 286 286 HOH HOH . 
G 4 HOH B 16 287 287 HOH HOH . 
G 4 HOH B 17 288 288 HOH HOH . 
G 4 HOH B 18 289 289 HOH HOH . 
G 4 HOH B 19 290 290 HOH HOH . 
G 4 HOH B 20 291 291 HOH HOH . 
G 4 HOH B 21 293 293 HOH HOH . 
G 4 HOH B 22 294 294 HOH HOH . 
G 4 HOH B 23 295 295 HOH HOH . 
G 4 HOH B 24 296 296 HOH HOH . 
G 4 HOH B 25 297 297 HOH HOH . 
G 4 HOH B 26 298 298 HOH HOH . 
G 4 HOH B 27 299 299 HOH HOH . 
G 4 HOH B 28 300 300 HOH HOH . 
G 4 HOH B 29 301 301 HOH HOH . 
G 4 HOH B 30 302 302 HOH HOH . 
G 4 HOH B 31 340 340 HOH HOH . 
G 4 HOH B 32 342 342 HOH HOH . 
G 4 HOH B 33 343 343 HOH HOH . 
G 4 HOH B 34 345 345 HOH HOH . 
G 4 HOH B 35 346 346 HOH HOH . 
G 4 HOH B 36 350 350 HOH HOH . 
G 4 HOH B 37 351 351 HOH HOH . 
G 4 HOH B 38 353 353 HOH HOH . 
G 4 HOH B 39 355 355 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CO 
_atom_site.label_atom_id         CO 
_atom_site.label_comp_id         CO 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -5.022 
_atom_site.Cartn_y               -19.414 
_atom_site.Cartn_z               -38.929 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        125.54 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CO 
_atom_site.auth_comp_id          CO 
_atom_site.auth_seq_id           2 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#