data_3BDQ # _model_server_result.job_id B8eosAppbAIy6YnmPU6tbg _model_server_result.datetime_utc '2024-10-18 23:36:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bdq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 3BDQ # _exptl.entry_id 3BDQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.96 _cell.angle_gamma 90 _cell.entry_id 3BDQ _cell.length_a 46.25 _cell.length_b 57.25 _cell.length_c 49.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BDQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 226 n n C1 O2 PLM doub 227 n n C1 C2 PLM sing 228 n n O1 H PLM sing 229 n n C2 C3 PLM sing 230 n n C2 H21 PLM sing 231 n n C2 H22 PLM sing 232 n n C3 C4 PLM sing 233 n n C3 H31 PLM sing 234 n n C3 H32 PLM sing 235 n n C4 C5 PLM sing 236 n n C4 H41 PLM sing 237 n n C4 H42 PLM sing 238 n n C5 C6 PLM sing 239 n n C5 H51 PLM sing 240 n n C5 H52 PLM sing 241 n n C6 C7 PLM sing 242 n n C6 H61 PLM sing 243 n n C6 H62 PLM sing 244 n n C7 C8 PLM sing 245 n n C7 H71 PLM sing 246 n n C7 H72 PLM sing 247 n n C8 C9 PLM sing 248 n n C8 H81 PLM sing 249 n n C8 H82 PLM sing 250 n n C9 CA PLM sing 251 n n C9 H91 PLM sing 252 n n C9 H92 PLM sing 253 n n CA CB PLM sing 254 n n CA HA1 PLM sing 255 n n CA HA2 PLM sing 256 n n CB CC PLM sing 257 n n CB HB1 PLM sing 258 n n CB HB2 PLM sing 259 n n CC CD PLM sing 260 n n CC HC1 PLM sing 261 n n CC HC2 PLM sing 262 n n CD CE PLM sing 263 n n CD HD1 PLM sing 264 n n CD HD2 PLM sing 265 n n CE CF PLM sing 266 n n CE HE1 PLM sing 267 n n CE HE2 PLM sing 268 n n CF CG PLM sing 269 n n CF HF1 PLM sing 270 n n CF HF2 PLM sing 271 n n CG HG1 PLM sing 272 n n CG HG2 PLM sing 273 n n CG HG3 PLM sing 274 n n # _atom_sites.entry_id 3BDQ _atom_sites.fract_transf_matrix[1][1] 0.021623 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010067 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017468 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022467 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PLM A 1 300 300 PLM PLM . D 2 PLM A 1 302 302 PLM PLM . E 2 PLM B 1 301 301 PLM PLM . F 3 HOH A 1 303 2 HOH HOH . F 3 HOH A 2 304 3 HOH HOH . F 3 HOH A 3 305 5 HOH HOH . F 3 HOH A 4 306 6 HOH HOH . F 3 HOH A 5 307 9 HOH HOH . F 3 HOH A 6 308 11 HOH HOH . F 3 HOH A 7 309 12 HOH HOH . F 3 HOH A 8 310 13 HOH HOH . F 3 HOH A 9 311 14 HOH HOH . F 3 HOH A 10 312 16 HOH HOH . F 3 HOH A 11 313 17 HOH HOH . F 3 HOH A 12 314 19 HOH HOH . F 3 HOH A 13 315 20 HOH HOH . F 3 HOH A 14 316 22 HOH HOH . F 3 HOH A 15 317 23 HOH HOH . F 3 HOH A 16 318 26 HOH HOH . F 3 HOH A 17 319 30 HOH HOH . F 3 HOH A 18 320 32 HOH HOH . F 3 HOH A 19 321 33 HOH HOH . F 3 HOH A 20 322 38 HOH HOH . F 3 HOH A 21 323 39 HOH HOH . F 3 HOH A 22 324 40 HOH HOH . F 3 HOH A 23 325 41 HOH HOH . F 3 HOH A 24 326 43 HOH HOH . F 3 HOH A 25 327 48 HOH HOH . F 3 HOH A 26 328 51 HOH HOH . F 3 HOH A 27 329 52 HOH HOH . F 3 HOH A 28 330 53 HOH HOH . F 3 HOH A 29 331 60 HOH HOH . F 3 HOH A 30 332 62 HOH HOH . F 3 HOH A 31 333 65 HOH HOH . F 3 HOH A 32 334 66 HOH HOH . G 3 HOH B 1 302 1 HOH HOH . G 3 HOH B 2 303 4 HOH HOH . G 3 HOH B 3 304 7 HOH HOH . G 3 HOH B 4 305 8 HOH HOH . G 3 HOH B 5 306 10 HOH HOH . G 3 HOH B 6 307 15 HOH HOH . G 3 HOH B 7 308 18 HOH HOH . G 3 HOH B 8 309 21 HOH HOH . G 3 HOH B 9 310 24 HOH HOH . G 3 HOH B 10 311 25 HOH HOH . G 3 HOH B 11 312 27 HOH HOH . G 3 HOH B 12 313 28 HOH HOH . G 3 HOH B 13 314 29 HOH HOH . G 3 HOH B 14 315 31 HOH HOH . G 3 HOH B 15 316 34 HOH HOH . G 3 HOH B 16 317 35 HOH HOH . G 3 HOH B 17 318 36 HOH HOH . G 3 HOH B 18 319 37 HOH HOH . G 3 HOH B 19 320 42 HOH HOH . G 3 HOH B 20 321 44 HOH HOH . G 3 HOH B 21 322 45 HOH HOH . G 3 HOH B 22 323 46 HOH HOH . G 3 HOH B 23 324 47 HOH HOH . G 3 HOH B 24 325 49 HOH HOH . G 3 HOH B 25 326 50 HOH HOH . G 3 HOH B 26 327 54 HOH HOH . G 3 HOH B 27 328 55 HOH HOH . G 3 HOH B 28 329 56 HOH HOH . G 3 HOH B 29 330 57 HOH HOH . G 3 HOH B 30 331 58 HOH HOH . G 3 HOH B 31 332 59 HOH HOH . G 3 HOH B 32 333 61 HOH HOH . G 3 HOH B 33 334 63 HOH HOH . G 3 HOH B 34 335 64 HOH HOH . G 3 HOH B 35 336 67 HOH HOH . G 3 HOH B 36 337 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . D 2 13.511 -12.806 10.795 1 36.92 ? C1 PLM 302 A 1 HETATM 2 O O1 PLM . . . D 2 14.726 -12.626 10.581 1 36.66 ? O1 PLM 302 A 1 HETATM 3 O O2 PLM . . . D 2 13.168 -13.47 11.786 1 37.48 ? O2 PLM 302 A 1 HETATM 4 C C2 PLM . . . D 2 12.469 -12.234 9.869 1 37.18 ? C2 PLM 302 A 1 HETATM 5 C C3 PLM . . . D 2 12.794 -10.767 9.651 1 37.03 ? C3 PLM 302 A 1 HETATM 6 C C4 PLM . . . D 2 11.625 -10.066 8.988 1 37.5 ? C4 PLM 302 A 1 HETATM 7 C C5 PLM . . . D 2 11.209 -8.83 9.776 1 37.77 ? C5 PLM 302 A 1 HETATM 8 C C6 PLM . . . D 2 11.01 -7.683 8.794 1 38.16 ? C6 PLM 302 A 1 HETATM 9 C C7 PLM . . . D 2 10.261 -6.509 9.401 1 38.08 ? C7 PLM 302 A 1 HETATM 10 C C8 PLM . . . D 2 8.947 -6.281 8.672 1 38.71 ? C8 PLM 302 A 1 HETATM 11 C C9 PLM . . . D 2 7.821 -5.966 9.652 1 38.62 ? C9 PLM 302 A 1 HETATM 12 C CA PLM . . . D 2 8.047 -4.588 10.264 1 38.33 ? CA PLM 302 A 1 HETATM 13 C CB PLM . . . D 2 7.319 -4.457 11.597 1 38.54 ? CB PLM 302 A 1 HETATM 14 C CC PLM . . . D 2 5.866 -4.056 11.398 1 37.45 ? CC PLM 302 A 1 HETATM 15 C CD PLM . . . D 2 5.291 -3.578 12.726 1 38.21 ? CD PLM 302 A 1 HETATM 16 C CE PLM . . . D 2 4.918 -2.096 12.707 1 37.26 ? CE PLM 302 A 1 HETATM 17 C CF PLM . . . D 2 4.237 -1.712 14.014 1 36.83 ? CF PLM 302 A 1 HETATM 18 C CG PLM . . . D 2 3.249 -0.563 13.843 1 37.02 ? CG PLM 302 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #