data_3BEH # _model_server_result.job_id Y-aY1jKVLCQuauo8iYnZng _model_server_result.datetime_utc '2025-08-30 15:55:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3beh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":356}' # _entry.id 3BEH # _exptl.entry_id 3BEH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BEH _cell.length_a 282.73 _cell.length_b 282.73 _cell.length_c 105.46 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BEH _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 K N N ? 3 L N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 175 A THR 175 1_555 G K K . A K 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? metalc ? metalc2 A O THR 176 A THR 176 1_555 G K K . A K 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? metalc ? metalc3 A O GLY 177 A GLY 177 1_555 F K K . A K 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc4 E K K . A K 356 1_555 B O TYR 178 B TYR 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc5 E K K . A K 356 1_555 C O TYR 178 C TYR 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc6 F K K . A K 357 1_555 B O GLY 177 B GLY 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc7 F K K . A K 357 1_555 C O GLY 177 C GLY 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? metalc ? metalc8 F K K . A K 357 1_555 D O GLY 177 D GLY 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc9 G K K . A K 358 1_555 B O THR 176 B THR 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc10 G K K . A K 358 1_555 C O THR 176 C THR 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc11 G K K . A K 358 1_555 D O THR 176 D THR 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc12 B O THR 175 B THR 175 1_555 J K K . B K 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? metalc ? metalc13 J K K . B K 356 1_555 C O THR 175 C THR 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 173 n n N1 CM1 LDA sing 174 n n N1 CM2 LDA sing 175 n n N1 C1 LDA sing 176 n n CM1 HM11 LDA sing 177 n n CM1 HM12 LDA sing 178 n n CM1 HM13 LDA sing 179 n n CM2 HM21 LDA sing 180 n n CM2 HM22 LDA sing 181 n n CM2 HM23 LDA sing 182 n n C1 C2 LDA sing 183 n n C1 H11 LDA sing 184 n n C1 H12 LDA sing 185 n n C2 C3 LDA sing 186 n n C2 H21 LDA sing 187 n n C2 H22 LDA sing 188 n n C3 C4 LDA sing 189 n n C3 H31 LDA sing 190 n n C3 H32 LDA sing 191 n n C4 C5 LDA sing 192 n n C4 H41 LDA sing 193 n n C4 H42 LDA sing 194 n n C5 C6 LDA sing 195 n n C5 H51 LDA sing 196 n n C5 H52 LDA sing 197 n n C6 C7 LDA sing 198 n n C6 H61 LDA sing 199 n n C6 H62 LDA sing 200 n n C7 C8 LDA sing 201 n n C7 H71 LDA sing 202 n n C7 H72 LDA sing 203 n n C8 C9 LDA sing 204 n n C8 H81 LDA sing 205 n n C8 H82 LDA sing 206 n n C9 C10 LDA sing 207 n n C9 H91 LDA sing 208 n n C9 H92 LDA sing 209 n n C10 C11 LDA sing 210 n n C10 H101 LDA sing 211 n n C10 H102 LDA sing 212 n n C11 C12 LDA sing 213 n n C11 H111 LDA sing 214 n n C11 H112 LDA sing 215 n n C12 H121 LDA sing 216 n n C12 H122 LDA sing 217 n n C12 H123 LDA sing 218 n n # _atom_sites.entry_id 3BEH _atom_sites.fract_transf_matrix[1][1] 0.003537 _atom_sites.fract_transf_matrix[1][2] 0.002042 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004084 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009482 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 K A 1 356 356 K K . F 2 K A 1 357 357 K K . G 2 K A 1 358 358 K K . H 2 K A 1 360 360 K K . I 3 LDA A 1 359 359 LDA LDA . J 2 K B 1 356 356 K K . K 3 LDA C 1 357 357 LDA LDA . L 3 LDA D 1 356 356 LDA LDA . M 3 LDA D 1 357 357 LDA LDA . N 4 HOH A 1 361 361 HOH HOH . N 4 HOH A 2 362 362 HOH HOH . N 4 HOH A 3 363 363 HOH HOH . N 4 HOH A 4 364 364 HOH HOH . O 4 HOH B 1 357 357 HOH HOH . O 4 HOH B 2 358 358 HOH HOH . O 4 HOH B 3 359 359 HOH HOH . O 4 HOH B 4 360 360 HOH HOH . P 4 HOH C 1 358 358 HOH HOH . P 4 HOH C 2 359 359 HOH HOH . P 4 HOH C 3 360 360 HOH HOH . P 4 HOH C 4 361 361 HOH HOH . P 4 HOH C 5 362 362 HOH HOH . P 4 HOH C 6 363 363 HOH HOH . P 4 HOH C 7 364 364 HOH HOH . P 4 HOH C 8 365 365 HOH HOH . Q 4 HOH D 1 358 358 HOH HOH . Q 4 HOH D 2 359 359 HOH HOH . Q 4 HOH D 3 360 360 HOH HOH . Q 4 HOH D 4 361 361 HOH HOH . Q 4 HOH D 5 362 362 HOH HOH . Q 4 HOH D 6 363 363 HOH HOH . Q 4 HOH D 7 364 364 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . L 3 50.396 -48.079 -7.524 1 82.86 ? N1 LDA 356 D 1 HETATM 2 O O1 LDA . . . L 3 50.369 -46.822 -7.527 1 82.9 ? O1 LDA 356 D 1 HETATM 3 C CM1 LDA . . . L 3 49.047 -48.608 -7.232 1 83.1 ? CM1 LDA 356 D 1 HETATM 4 C CM2 LDA . . . L 3 50.79 -48.545 -8.866 1 82.89 ? CM2 LDA 356 D 1 HETATM 5 C C1 LDA . . . L 3 51.372 -48.58 -6.558 1 81.97 ? C1 LDA 356 D 1 HETATM 6 C C2 LDA . . . L 3 51.231 -47.813 -5.239 1 80.49 ? C2 LDA 356 D 1 HETATM 7 C C3 LDA . . . L 3 52.545 -47.805 -4.468 1 79.23 ? C3 LDA 356 D 1 HETATM 8 C C4 LDA . . . L 3 52.538 -48.851 -3.36 1 78.14 ? C4 LDA 356 D 1 HETATM 9 C C5 LDA . . . L 3 53.955 -49.309 -3.046 1 77.32 ? C5 LDA 356 D 1 HETATM 10 C C6 LDA . . . L 3 54.369 -48.88 -1.643 1 76.78 ? C6 LDA 356 D 1 HETATM 11 C C7 LDA . . . L 3 55.734 -49.459 -1.295 1 76.47 ? C7 LDA 356 D 1 HETATM 12 C C8 LDA . . . L 3 55.948 -49.507 0.213 1 76.41 ? C8 LDA 356 D 1 HETATM 13 C C9 LDA . . . L 3 57.083 -50.467 0.548 1 76.51 ? C9 LDA 356 D 1 HETATM 14 C C10 LDA . . . L 3 57.416 -50.452 2.037 1 76.58 ? C10 LDA 356 D 1 HETATM 15 C C11 LDA . . . L 3 58.051 -51.773 2.466 1 76.78 ? C11 LDA 356 D 1 HETATM 16 C C12 LDA . . . L 3 59.557 -51.636 2.669 1 76.51 ? C12 LDA 356 D 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 631 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #