data_3BEO # _model_server_result.job_id KW4A7HYiA78ek71xyL6Ugg _model_server_result.datetime_utc '2024-11-23 19:57:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3beo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1081}' # _entry.id 3BEO # _exptl.entry_id 3BEO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.161 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "URIDINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.22 _cell.angle_gamma 90 _cell.entry_id 3BEO _cell.length_a 46.404 _cell.length_b 188.165 _cell.length_c 61.679 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BEO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C9 H14 N2 O12 P2' _chem_comp.formula_weight 404.161 _chem_comp.id UDP _chem_comp.mon_nstd_flag . _chem_comp.name "URIDINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 UDP sing 413 n n N1 C6 UDP sing 414 n n N1 C1' UDP sing 415 n n C2 N3 UDP sing 416 n n C2 O2 UDP doub 417 n n N3 C4 UDP sing 418 n n N3 HN3 UDP sing 419 n n C4 C5 UDP sing 420 n n C4 O4 UDP doub 421 n n C5 C6 UDP doub 422 n n C5 H5 UDP sing 423 n n C6 H6 UDP sing 424 n n C1' C2' UDP sing 425 n n C1' O4' UDP sing 426 n n C1' H1' UDP sing 427 n n C2' O2' UDP sing 428 n n C2' C3' UDP sing 429 n n C2' H2' UDP sing 430 n n O2' HO2' UDP sing 431 n n C3' C4' UDP sing 432 n n C3' O3' UDP sing 433 n n C3' H3' UDP sing 434 n n C4' O4' UDP sing 435 n n C4' C5' UDP sing 436 n n C4' H4' UDP sing 437 n n O3' HO3' UDP sing 438 n n C5' O5' UDP sing 439 n n C5' "H5'1" UDP sing 440 n n C5' "H5'2" UDP sing 441 n n O5' PA UDP sing 442 n n PA O1A UDP doub 443 n n PA O2A UDP sing 444 n n PA O3A UDP sing 445 n n O2A HOA2 UDP sing 446 n n O3A PB UDP sing 447 n n PB O1B UDP doub 448 n n PB O2B UDP sing 449 n n PB O3B UDP sing 450 n n O2B HOB2 UDP sing 451 n n O3B HOB3 UDP sing 452 n n # _atom_sites.entry_id 3BEO _atom_sites.fract_transf_matrix[1][1] 0.02155 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008802 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017513 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UD1 A 1 372 1 UD1 UD1 . D 3 UDP A 1 1081 1081 UDP UDP . E 2 UD1 B 1 372 1 UD1 UD1 . F 3 UDP B 1 1081 1081 UDP UDP . G 4 HOH A 1 1082 3 HOH HOH . G 4 HOH A 2 1083 4 HOH HOH . G 4 HOH A 3 1084 5 HOH HOH . G 4 HOH A 4 1085 7 HOH HOH . G 4 HOH A 5 1086 8 HOH HOH . G 4 HOH A 6 1087 9 HOH HOH . G 4 HOH A 7 1088 10 HOH HOH . G 4 HOH A 8 1089 15 HOH HOH . G 4 HOH A 9 1090 17 HOH HOH . G 4 HOH A 10 1091 21 HOH HOH . G 4 HOH A 11 1092 22 HOH HOH . G 4 HOH A 12 1093 23 HOH HOH . G 4 HOH A 13 1094 24 HOH HOH . G 4 HOH A 14 1095 25 HOH HOH . G 4 HOH A 15 1096 27 HOH HOH . G 4 HOH A 16 1097 29 HOH HOH . G 4 HOH A 17 1098 31 HOH HOH . G 4 HOH A 18 1099 33 HOH HOH . G 4 HOH A 19 1100 34 HOH HOH . G 4 HOH A 20 1101 37 HOH HOH . G 4 HOH A 21 1102 43 HOH HOH . G 4 HOH A 22 1103 46 HOH HOH . G 4 HOH A 23 1104 48 HOH HOH . G 4 HOH A 24 1105 49 HOH HOH . G 4 HOH A 25 1106 50 HOH HOH . G 4 HOH A 26 1107 51 HOH HOH . G 4 HOH A 27 1108 55 HOH HOH . G 4 HOH A 28 1109 56 HOH HOH . G 4 HOH A 29 1110 59 HOH HOH . G 4 HOH A 30 1111 60 HOH HOH . G 4 HOH A 31 1112 68 HOH HOH . G 4 HOH A 32 1113 69 HOH HOH . G 4 HOH A 33 1114 70 HOH HOH . G 4 HOH A 34 1115 71 HOH HOH . G 4 HOH A 35 1116 72 HOH HOH . G 4 HOH A 36 1117 73 HOH HOH . G 4 HOH A 37 1118 74 HOH HOH . G 4 HOH A 38 1119 78 HOH HOH . G 4 HOH A 39 1120 79 HOH HOH . G 4 HOH A 40 1121 82 HOH HOH . G 4 HOH A 41 1122 83 HOH HOH . G 4 HOH A 42 1123 84 HOH HOH . G 4 HOH A 43 1124 87 HOH HOH . G 4 HOH A 44 1125 90 HOH HOH . G 4 HOH A 45 1126 91 HOH HOH . G 4 HOH A 46 1127 92 HOH HOH . G 4 HOH A 47 1128 93 HOH HOH . G 4 HOH A 48 1129 94 HOH HOH . G 4 HOH A 49 1130 95 HOH HOH . G 4 HOH A 50 1131 96 HOH HOH . G 4 HOH A 51 1132 97 HOH HOH . G 4 HOH A 52 1133 98 HOH HOH . G 4 HOH A 53 1134 99 HOH HOH . G 4 HOH A 54 1135 103 HOH HOH . G 4 HOH A 55 1136 107 HOH HOH . G 4 HOH A 56 1137 110 HOH HOH . G 4 HOH A 57 1138 114 HOH HOH . G 4 HOH A 58 1139 115 HOH HOH . G 4 HOH A 59 1140 116 HOH HOH . G 4 HOH A 60 1141 119 HOH HOH . G 4 HOH A 61 1142 123 HOH HOH . G 4 HOH A 62 1143 124 HOH HOH . G 4 HOH A 63 1144 130 HOH HOH . G 4 HOH A 64 1145 131 HOH HOH . G 4 HOH A 65 1146 132 HOH HOH . G 4 HOH A 66 1147 134 HOH HOH . G 4 HOH A 67 1148 135 HOH HOH . G 4 HOH A 68 1149 140 HOH HOH . G 4 HOH A 69 1150 141 HOH HOH . G 4 HOH A 70 1151 146 HOH HOH . G 4 HOH A 71 1152 147 HOH HOH . G 4 HOH A 72 1153 148 HOH HOH . G 4 HOH A 73 1154 150 HOH HOH . G 4 HOH A 74 1155 151 HOH HOH . G 4 HOH A 75 1156 152 HOH HOH . G 4 HOH A 76 1157 155 HOH HOH . G 4 HOH A 77 1158 156 HOH HOH . G 4 HOH A 78 1159 158 HOH HOH . G 4 HOH A 79 1160 159 HOH HOH . G 4 HOH A 80 1161 164 HOH HOH . G 4 HOH A 81 1162 165 HOH HOH . G 4 HOH A 82 1163 169 HOH HOH . G 4 HOH A 83 1164 170 HOH HOH . G 4 HOH A 84 1165 176 HOH HOH . G 4 HOH A 85 1166 178 HOH HOH . G 4 HOH A 86 1167 183 HOH HOH . G 4 HOH A 87 1168 184 HOH HOH . G 4 HOH A 88 1169 188 HOH HOH . G 4 HOH A 89 1170 193 HOH HOH . G 4 HOH A 90 1171 194 HOH HOH . G 4 HOH A 91 1172 197 HOH HOH . G 4 HOH A 92 1173 198 HOH HOH . G 4 HOH A 93 1174 200 HOH HOH . G 4 HOH A 94 1175 203 HOH HOH . G 4 HOH A 95 1176 204 HOH HOH . G 4 HOH A 96 1177 206 HOH HOH . G 4 HOH A 97 1178 207 HOH HOH . G 4 HOH A 98 1179 211 HOH HOH . G 4 HOH A 99 1180 212 HOH HOH . G 4 HOH A 100 1181 214 HOH HOH . G 4 HOH A 101 1182 215 HOH HOH . G 4 HOH A 102 1183 216 HOH HOH . G 4 HOH A 103 1184 218 HOH HOH . G 4 HOH A 104 1185 219 HOH HOH . G 4 HOH A 105 1186 221 HOH HOH . G 4 HOH A 106 1187 222 HOH HOH . G 4 HOH A 107 1188 228 HOH HOH . G 4 HOH A 108 1189 229 HOH HOH . G 4 HOH A 109 1190 231 HOH HOH . G 4 HOH A 110 1191 233 HOH HOH . G 4 HOH A 111 1192 234 HOH HOH . G 4 HOH A 112 1193 238 HOH HOH . G 4 HOH A 113 1194 241 HOH HOH . G 4 HOH A 114 1195 242 HOH HOH . G 4 HOH A 115 1196 243 HOH HOH . G 4 HOH A 116 1197 246 HOH HOH . G 4 HOH A 117 1198 248 HOH HOH . G 4 HOH A 118 1199 251 HOH HOH . G 4 HOH A 119 1200 252 HOH HOH . G 4 HOH A 120 1201 253 HOH HOH . G 4 HOH A 121 1202 254 HOH HOH . G 4 HOH A 122 1203 256 HOH HOH . G 4 HOH A 123 1204 257 HOH HOH . G 4 HOH A 124 1205 258 HOH HOH . G 4 HOH A 125 1206 262 HOH HOH . G 4 HOH A 126 1207 263 HOH HOH . G 4 HOH A 127 1208 265 HOH HOH . G 4 HOH A 128 1209 269 HOH HOH . G 4 HOH A 129 1210 272 HOH HOH . G 4 HOH A 130 1211 273 HOH HOH . G 4 HOH A 131 1212 277 HOH HOH . G 4 HOH A 132 1213 279 HOH HOH . G 4 HOH A 133 1214 280 HOH HOH . G 4 HOH A 134 1215 283 HOH HOH . G 4 HOH A 135 1216 284 HOH HOH . G 4 HOH A 136 1217 287 HOH HOH . G 4 HOH A 137 1218 288 HOH HOH . G 4 HOH A 138 1219 289 HOH HOH . G 4 HOH A 139 1220 290 HOH HOH . G 4 HOH A 140 1221 291 HOH HOH . G 4 HOH A 141 1222 292 HOH HOH . G 4 HOH A 142 1223 298 HOH HOH . G 4 HOH A 143 1224 299 HOH HOH . G 4 HOH A 144 1225 301 HOH HOH . G 4 HOH A 145 1226 302 HOH HOH . G 4 HOH A 146 1227 305 HOH HOH . G 4 HOH A 147 1228 308 HOH HOH . G 4 HOH A 148 1229 309 HOH HOH . G 4 HOH A 149 1230 310 HOH HOH . G 4 HOH A 150 1231 311 HOH HOH . G 4 HOH A 151 1232 312 HOH HOH . G 4 HOH A 152 1233 317 HOH HOH . G 4 HOH A 153 1234 318 HOH HOH . G 4 HOH A 154 1235 319 HOH HOH . G 4 HOH A 155 1236 322 HOH HOH . G 4 HOH A 156 1237 323 HOH HOH . G 4 HOH A 157 1238 324 HOH HOH . G 4 HOH A 158 1239 326 HOH HOH . G 4 HOH A 159 1240 332 HOH HOH . G 4 HOH A 160 1241 333 HOH HOH . G 4 HOH A 161 1242 336 HOH HOH . G 4 HOH A 162 1243 338 HOH HOH . G 4 HOH A 163 1244 339 HOH HOH . G 4 HOH A 164 1245 340 HOH HOH . G 4 HOH A 165 1246 343 HOH HOH . G 4 HOH A 166 1247 344 HOH HOH . G 4 HOH A 167 1248 345 HOH HOH . G 4 HOH A 168 1249 350 HOH HOH . G 4 HOH A 169 1250 352 HOH HOH . G 4 HOH A 170 1251 353 HOH HOH . G 4 HOH A 171 1252 354 HOH HOH . G 4 HOH A 172 1253 355 HOH HOH . G 4 HOH A 173 1254 358 HOH HOH . G 4 HOH A 174 1255 359 HOH HOH . G 4 HOH A 175 1256 360 HOH HOH . G 4 HOH A 176 1257 362 HOH HOH . G 4 HOH A 177 1258 363 HOH HOH . G 4 HOH A 178 1259 364 HOH HOH . G 4 HOH A 179 1260 366 HOH HOH . G 4 HOH A 180 1261 374 HOH HOH . G 4 HOH A 181 1262 376 HOH HOH . G 4 HOH A 182 1263 380 HOH HOH . G 4 HOH A 183 1264 382 HOH HOH . G 4 HOH A 184 1265 383 HOH HOH . G 4 HOH A 185 1266 384 HOH HOH . G 4 HOH A 186 1267 387 HOH HOH . G 4 HOH A 187 1268 390 HOH HOH . G 4 HOH A 188 1269 392 HOH HOH . G 4 HOH A 189 1270 393 HOH HOH . G 4 HOH A 190 1271 395 HOH HOH . G 4 HOH A 191 1272 398 HOH HOH . G 4 HOH A 192 1273 402 HOH HOH . G 4 HOH A 193 1274 403 HOH HOH . G 4 HOH A 194 1275 404 HOH HOH . G 4 HOH A 195 1276 405 HOH HOH . G 4 HOH A 196 1277 407 HOH HOH . G 4 HOH A 197 1278 410 HOH HOH . G 4 HOH A 198 1279 411 HOH HOH . G 4 HOH A 199 1280 414 HOH HOH . G 4 HOH A 200 1281 418 HOH HOH . G 4 HOH A 201 1282 419 HOH HOH . G 4 HOH A 202 1283 420 HOH HOH . G 4 HOH A 203 1284 423 HOH HOH . G 4 HOH A 204 1285 424 HOH HOH . G 4 HOH A 205 1286 425 HOH HOH . G 4 HOH A 206 1287 429 HOH HOH . G 4 HOH A 207 1288 430 HOH HOH . G 4 HOH A 208 1289 431 HOH HOH . G 4 HOH A 209 1290 437 HOH HOH . G 4 HOH A 210 1291 440 HOH HOH . G 4 HOH A 211 1292 441 HOH HOH . G 4 HOH A 212 1293 442 HOH HOH . G 4 HOH A 213 1294 443 HOH HOH . G 4 HOH A 214 1295 445 HOH HOH . G 4 HOH A 215 1296 449 HOH HOH . G 4 HOH A 216 1297 453 HOH HOH . G 4 HOH A 217 1298 456 HOH HOH . G 4 HOH A 218 1299 457 HOH HOH . G 4 HOH A 219 1300 458 HOH HOH . G 4 HOH A 220 1301 459 HOH HOH . G 4 HOH A 221 1302 460 HOH HOH . G 4 HOH A 222 1303 461 HOH HOH . G 4 HOH A 223 1304 464 HOH HOH . G 4 HOH A 224 1305 466 HOH HOH . G 4 HOH A 225 1306 468 HOH HOH . G 4 HOH A 226 1307 470 HOH HOH . G 4 HOH A 227 1308 471 HOH HOH . G 4 HOH A 228 1309 474 HOH HOH . G 4 HOH A 229 1310 476 HOH HOH . G 4 HOH A 230 1311 478 HOH HOH . G 4 HOH A 231 1312 479 HOH HOH . G 4 HOH A 232 1313 483 HOH HOH . G 4 HOH A 233 1314 484 HOH HOH . G 4 HOH A 234 1315 485 HOH HOH . G 4 HOH A 235 1316 486 HOH HOH . G 4 HOH A 236 1317 487 HOH HOH . G 4 HOH A 237 1318 490 HOH HOH . G 4 HOH A 238 1319 491 HOH HOH . G 4 HOH A 239 1320 492 HOH HOH . G 4 HOH A 240 1321 494 HOH HOH . G 4 HOH A 241 1322 498 HOH HOH . G 4 HOH A 242 1323 499 HOH HOH . G 4 HOH A 243 1324 501 HOH HOH . G 4 HOH A 244 1325 504 HOH HOH . G 4 HOH A 245 1326 506 HOH HOH . G 4 HOH A 246 1327 512 HOH HOH . G 4 HOH A 247 1328 513 HOH HOH . G 4 HOH A 248 1329 515 HOH HOH . G 4 HOH A 249 1330 521 HOH HOH . G 4 HOH A 250 1331 523 HOH HOH . G 4 HOH A 251 1332 524 HOH HOH . G 4 HOH A 252 1333 525 HOH HOH . G 4 HOH A 253 1334 528 HOH HOH . G 4 HOH A 254 1335 529 HOH HOH . G 4 HOH A 255 1336 531 HOH HOH . G 4 HOH A 256 1337 533 HOH HOH . G 4 HOH A 257 1338 534 HOH HOH . G 4 HOH A 258 1339 535 HOH HOH . G 4 HOH A 259 1340 540 HOH HOH . G 4 HOH A 260 1341 542 HOH HOH . G 4 HOH A 261 1342 543 HOH HOH . G 4 HOH A 262 1343 544 HOH HOH . G 4 HOH A 263 1344 548 HOH HOH . G 4 HOH A 264 1345 549 HOH HOH . G 4 HOH A 265 1346 551 HOH HOH . G 4 HOH A 266 1347 553 HOH HOH . G 4 HOH A 267 1348 560 HOH HOH . G 4 HOH A 268 1349 562 HOH HOH . G 4 HOH A 269 1350 565 HOH HOH . G 4 HOH A 270 1351 566 HOH HOH . G 4 HOH A 271 1352 569 HOH HOH . G 4 HOH A 272 1353 571 HOH HOH . G 4 HOH A 273 1354 572 HOH HOH . G 4 HOH A 274 1355 577 HOH HOH . G 4 HOH A 275 1356 163 HOH HOH . G 4 HOH A 276 1357 239 HOH HOH . G 4 HOH A 277 1358 334 HOH HOH . G 4 HOH A 278 1359 567 HOH HOH . H 4 HOH B 1 1188 226 HOH HOH . H 4 HOH B 2 1189 372 HOH HOH . H 4 HOH B 3 1190 559 HOH HOH . H 4 HOH B 4 1191 573 HOH HOH . H 4 HOH B 5 1192 1 HOH HOH . H 4 HOH B 6 1193 2 HOH HOH . H 4 HOH B 7 1194 6 HOH HOH . H 4 HOH B 8 1195 11 HOH HOH . H 4 HOH B 9 1196 12 HOH HOH . H 4 HOH B 10 1197 13 HOH HOH . H 4 HOH B 11 1198 14 HOH HOH . H 4 HOH B 12 1199 16 HOH HOH . H 4 HOH B 13 1200 18 HOH HOH . H 4 HOH B 14 1201 19 HOH HOH . H 4 HOH B 15 1202 20 HOH HOH . H 4 HOH B 16 1203 26 HOH HOH . H 4 HOH B 17 1204 28 HOH HOH . H 4 HOH B 18 1205 30 HOH HOH . H 4 HOH B 19 1206 32 HOH HOH . H 4 HOH B 20 1207 35 HOH HOH . H 4 HOH B 21 1208 36 HOH HOH . H 4 HOH B 22 1209 38 HOH HOH . H 4 HOH B 23 1210 39 HOH HOH . H 4 HOH B 24 1211 40 HOH HOH . H 4 HOH B 25 1212 41 HOH HOH . H 4 HOH B 26 1213 42 HOH HOH . H 4 HOH B 27 1214 44 HOH HOH . H 4 HOH B 28 1215 45 HOH HOH . H 4 HOH B 29 1216 47 HOH HOH . H 4 HOH B 30 1217 52 HOH HOH . H 4 HOH B 31 1218 53 HOH HOH . H 4 HOH B 32 1219 54 HOH HOH . H 4 HOH B 33 1220 57 HOH HOH . H 4 HOH B 34 1221 58 HOH HOH . H 4 HOH B 35 1222 61 HOH HOH . H 4 HOH B 36 1223 62 HOH HOH . H 4 HOH B 37 1224 63 HOH HOH . H 4 HOH B 38 1225 64 HOH HOH . H 4 HOH B 39 1226 65 HOH HOH . H 4 HOH B 40 1227 66 HOH HOH . H 4 HOH B 41 1228 67 HOH HOH . H 4 HOH B 42 1229 75 HOH HOH . H 4 HOH B 43 1230 76 HOH HOH . H 4 HOH B 44 1231 77 HOH HOH . H 4 HOH B 45 1232 80 HOH HOH . H 4 HOH B 46 1233 81 HOH HOH . H 4 HOH B 47 1234 85 HOH HOH . H 4 HOH B 48 1235 86 HOH HOH . H 4 HOH B 49 1236 88 HOH HOH . H 4 HOH B 50 1237 89 HOH HOH . H 4 HOH B 51 1238 100 HOH HOH . H 4 HOH B 52 1239 101 HOH HOH . H 4 HOH B 53 1240 102 HOH HOH . H 4 HOH B 54 1241 104 HOH HOH . H 4 HOH B 55 1242 105 HOH HOH . H 4 HOH B 56 1243 106 HOH HOH . H 4 HOH B 57 1244 108 HOH HOH . H 4 HOH B 58 1245 109 HOH HOH . H 4 HOH B 59 1246 111 HOH HOH . H 4 HOH B 60 1247 112 HOH HOH . H 4 HOH B 61 1248 113 HOH HOH . H 4 HOH B 62 1249 117 HOH HOH . H 4 HOH B 63 1250 118 HOH HOH . H 4 HOH B 64 1251 120 HOH HOH . H 4 HOH B 65 1252 121 HOH HOH . H 4 HOH B 66 1253 122 HOH HOH . H 4 HOH B 67 1254 125 HOH HOH . H 4 HOH B 68 1255 126 HOH HOH . H 4 HOH B 69 1256 127 HOH HOH . H 4 HOH B 70 1257 128 HOH HOH . H 4 HOH B 71 1258 129 HOH HOH . H 4 HOH B 72 1259 133 HOH HOH . H 4 HOH B 73 1260 136 HOH HOH . H 4 HOH B 74 1261 137 HOH HOH . H 4 HOH B 75 1262 138 HOH HOH . H 4 HOH B 76 1263 139 HOH HOH . H 4 HOH B 77 1264 142 HOH HOH . H 4 HOH B 78 1265 143 HOH HOH . H 4 HOH B 79 1266 144 HOH HOH . H 4 HOH B 80 1267 145 HOH HOH . H 4 HOH B 81 1268 149 HOH HOH . H 4 HOH B 82 1269 153 HOH HOH . H 4 HOH B 83 1270 154 HOH HOH . H 4 HOH B 84 1271 157 HOH HOH . H 4 HOH B 85 1272 160 HOH HOH . H 4 HOH B 86 1273 161 HOH HOH . H 4 HOH B 87 1274 162 HOH HOH . H 4 HOH B 88 1275 166 HOH HOH . H 4 HOH B 89 1276 167 HOH HOH . H 4 HOH B 90 1277 168 HOH HOH . H 4 HOH B 91 1278 171 HOH HOH . H 4 HOH B 92 1279 172 HOH HOH . H 4 HOH B 93 1280 173 HOH HOH . H 4 HOH B 94 1281 174 HOH HOH . H 4 HOH B 95 1282 175 HOH HOH . H 4 HOH B 96 1283 177 HOH HOH . H 4 HOH B 97 1284 179 HOH HOH . H 4 HOH B 98 1285 180 HOH HOH . H 4 HOH B 99 1286 181 HOH HOH . H 4 HOH B 100 1287 182 HOH HOH . H 4 HOH B 101 1288 185 HOH HOH . H 4 HOH B 102 1289 186 HOH HOH . H 4 HOH B 103 1290 187 HOH HOH . H 4 HOH B 104 1291 189 HOH HOH . H 4 HOH B 105 1292 190 HOH HOH . H 4 HOH B 106 1293 191 HOH HOH . H 4 HOH B 107 1294 192 HOH HOH . H 4 HOH B 108 1295 195 HOH HOH . H 4 HOH B 109 1296 196 HOH HOH . H 4 HOH B 110 1297 199 HOH HOH . H 4 HOH B 111 1298 201 HOH HOH . H 4 HOH B 112 1299 202 HOH HOH . H 4 HOH B 113 1300 205 HOH HOH . H 4 HOH B 114 1301 208 HOH HOH . H 4 HOH B 115 1302 209 HOH HOH . H 4 HOH B 116 1303 210 HOH HOH . H 4 HOH B 117 1304 213 HOH HOH . H 4 HOH B 118 1305 217 HOH HOH . H 4 HOH B 119 1306 220 HOH HOH . H 4 HOH B 120 1307 223 HOH HOH . H 4 HOH B 121 1308 224 HOH HOH . H 4 HOH B 122 1309 225 HOH HOH . H 4 HOH B 123 1310 227 HOH HOH . H 4 HOH B 124 1311 230 HOH HOH . H 4 HOH B 125 1312 232 HOH HOH . H 4 HOH B 126 1313 235 HOH HOH . H 4 HOH B 127 1314 236 HOH HOH . H 4 HOH B 128 1315 237 HOH HOH . H 4 HOH B 129 1316 240 HOH HOH . H 4 HOH B 130 1317 244 HOH HOH . H 4 HOH B 131 1318 245 HOH HOH . H 4 HOH B 132 1319 247 HOH HOH . H 4 HOH B 133 1320 249 HOH HOH . H 4 HOH B 134 1321 250 HOH HOH . H 4 HOH B 135 1322 255 HOH HOH . H 4 HOH B 136 1323 259 HOH HOH . H 4 HOH B 137 1324 260 HOH HOH . H 4 HOH B 138 1325 261 HOH HOH . H 4 HOH B 139 1326 264 HOH HOH . H 4 HOH B 140 1327 266 HOH HOH . H 4 HOH B 141 1328 267 HOH HOH . H 4 HOH B 142 1329 268 HOH HOH . H 4 HOH B 143 1330 270 HOH HOH . H 4 HOH B 144 1331 271 HOH HOH . H 4 HOH B 145 1332 274 HOH HOH . H 4 HOH B 146 1333 275 HOH HOH . H 4 HOH B 147 1334 276 HOH HOH . H 4 HOH B 148 1335 278 HOH HOH . H 4 HOH B 149 1336 281 HOH HOH . H 4 HOH B 150 1337 282 HOH HOH . H 4 HOH B 151 1338 285 HOH HOH . H 4 HOH B 152 1339 286 HOH HOH . H 4 HOH B 153 1340 293 HOH HOH . H 4 HOH B 154 1341 294 HOH HOH . H 4 HOH B 155 1342 295 HOH HOH . H 4 HOH B 156 1343 296 HOH HOH . H 4 HOH B 157 1344 297 HOH HOH . H 4 HOH B 158 1345 300 HOH HOH . H 4 HOH B 159 1346 303 HOH HOH . H 4 HOH B 160 1347 304 HOH HOH . H 4 HOH B 161 1348 306 HOH HOH . H 4 HOH B 162 1349 307 HOH HOH . H 4 HOH B 163 1350 313 HOH HOH . H 4 HOH B 164 1351 314 HOH HOH . H 4 HOH B 165 1352 315 HOH HOH . H 4 HOH B 166 1353 316 HOH HOH . H 4 HOH B 167 1354 320 HOH HOH . H 4 HOH B 168 1355 321 HOH HOH . H 4 HOH B 169 1356 325 HOH HOH . H 4 HOH B 170 1357 327 HOH HOH . H 4 HOH B 171 1358 328 HOH HOH . H 4 HOH B 172 1359 329 HOH HOH . H 4 HOH B 173 1360 330 HOH HOH . H 4 HOH B 174 1361 331 HOH HOH . H 4 HOH B 175 1362 335 HOH HOH . H 4 HOH B 176 1363 337 HOH HOH . H 4 HOH B 177 1364 341 HOH HOH . H 4 HOH B 178 1365 342 HOH HOH . H 4 HOH B 179 1366 346 HOH HOH . H 4 HOH B 180 1367 347 HOH HOH . H 4 HOH B 181 1368 348 HOH HOH . H 4 HOH B 182 1369 349 HOH HOH . H 4 HOH B 183 1370 351 HOH HOH . H 4 HOH B 184 1371 356 HOH HOH . H 4 HOH B 185 1372 357 HOH HOH . H 4 HOH B 186 1373 361 HOH HOH . H 4 HOH B 187 1374 365 HOH HOH . H 4 HOH B 188 1375 367 HOH HOH . H 4 HOH B 189 1376 368 HOH HOH . H 4 HOH B 190 1377 369 HOH HOH . H 4 HOH B 191 1378 370 HOH HOH . H 4 HOH B 192 1379 371 HOH HOH . H 4 HOH B 193 1380 373 HOH HOH . H 4 HOH B 194 1381 375 HOH HOH . H 4 HOH B 195 1382 377 HOH HOH . H 4 HOH B 196 1383 378 HOH HOH . H 4 HOH B 197 1384 379 HOH HOH . H 4 HOH B 198 1385 381 HOH HOH . H 4 HOH B 199 1386 385 HOH HOH . H 4 HOH B 200 1387 386 HOH HOH . H 4 HOH B 201 1388 388 HOH HOH . H 4 HOH B 202 1389 389 HOH HOH . H 4 HOH B 203 1390 391 HOH HOH . H 4 HOH B 204 1391 394 HOH HOH . H 4 HOH B 205 1392 396 HOH HOH . H 4 HOH B 206 1393 397 HOH HOH . H 4 HOH B 207 1394 399 HOH HOH . H 4 HOH B 208 1395 400 HOH HOH . H 4 HOH B 209 1396 401 HOH HOH . H 4 HOH B 210 1397 406 HOH HOH . H 4 HOH B 211 1398 408 HOH HOH . H 4 HOH B 212 1399 409 HOH HOH . H 4 HOH B 213 1400 412 HOH HOH . H 4 HOH B 214 1401 413 HOH HOH . H 4 HOH B 215 1402 415 HOH HOH . H 4 HOH B 216 1403 416 HOH HOH . H 4 HOH B 217 1404 417 HOH HOH . H 4 HOH B 218 1405 421 HOH HOH . H 4 HOH B 219 1406 422 HOH HOH . H 4 HOH B 220 1407 426 HOH HOH . H 4 HOH B 221 1408 427 HOH HOH . H 4 HOH B 222 1409 428 HOH HOH . H 4 HOH B 223 1410 432 HOH HOH . H 4 HOH B 224 1411 433 HOH HOH . H 4 HOH B 225 1412 434 HOH HOH . H 4 HOH B 226 1413 435 HOH HOH . H 4 HOH B 227 1414 436 HOH HOH . H 4 HOH B 228 1415 438 HOH HOH . H 4 HOH B 229 1416 439 HOH HOH . H 4 HOH B 230 1417 444 HOH HOH . H 4 HOH B 231 1418 446 HOH HOH . H 4 HOH B 232 1419 447 HOH HOH . H 4 HOH B 233 1420 448 HOH HOH . H 4 HOH B 234 1421 450 HOH HOH . H 4 HOH B 235 1422 451 HOH HOH . H 4 HOH B 236 1423 452 HOH HOH . H 4 HOH B 237 1424 454 HOH HOH . H 4 HOH B 238 1425 455 HOH HOH . H 4 HOH B 239 1426 462 HOH HOH . H 4 HOH B 240 1427 463 HOH HOH . H 4 HOH B 241 1428 465 HOH HOH . H 4 HOH B 242 1429 467 HOH HOH . H 4 HOH B 243 1430 469 HOH HOH . H 4 HOH B 244 1431 472 HOH HOH . H 4 HOH B 245 1432 473 HOH HOH . H 4 HOH B 246 1433 475 HOH HOH . H 4 HOH B 247 1434 477 HOH HOH . H 4 HOH B 248 1435 480 HOH HOH . H 4 HOH B 249 1436 481 HOH HOH . H 4 HOH B 250 1437 482 HOH HOH . H 4 HOH B 251 1438 488 HOH HOH . H 4 HOH B 252 1439 489 HOH HOH . H 4 HOH B 253 1440 493 HOH HOH . H 4 HOH B 254 1441 495 HOH HOH . H 4 HOH B 255 1442 496 HOH HOH . H 4 HOH B 256 1443 497 HOH HOH . H 4 HOH B 257 1444 500 HOH HOH . H 4 HOH B 258 1445 502 HOH HOH . H 4 HOH B 259 1446 503 HOH HOH . H 4 HOH B 260 1447 505 HOH HOH . H 4 HOH B 261 1448 507 HOH HOH . H 4 HOH B 262 1449 508 HOH HOH . H 4 HOH B 263 1450 509 HOH HOH . H 4 HOH B 264 1451 510 HOH HOH . H 4 HOH B 265 1452 511 HOH HOH . H 4 HOH B 266 1453 514 HOH HOH . H 4 HOH B 267 1454 516 HOH HOH . H 4 HOH B 268 1455 517 HOH HOH . H 4 HOH B 269 1456 518 HOH HOH . H 4 HOH B 270 1457 519 HOH HOH . H 4 HOH B 271 1458 520 HOH HOH . H 4 HOH B 272 1459 522 HOH HOH . H 4 HOH B 273 1460 526 HOH HOH . H 4 HOH B 274 1461 527 HOH HOH . H 4 HOH B 275 1462 530 HOH HOH . H 4 HOH B 276 1463 532 HOH HOH . H 4 HOH B 277 1464 536 HOH HOH . H 4 HOH B 278 1465 537 HOH HOH . H 4 HOH B 279 1466 538 HOH HOH . H 4 HOH B 280 1467 539 HOH HOH . H 4 HOH B 281 1468 541 HOH HOH . H 4 HOH B 282 1469 545 HOH HOH . H 4 HOH B 283 1470 546 HOH HOH . H 4 HOH B 284 1471 547 HOH HOH . H 4 HOH B 285 1472 550 HOH HOH . H 4 HOH B 286 1473 552 HOH HOH . H 4 HOH B 287 1474 554 HOH HOH . H 4 HOH B 288 1475 555 HOH HOH . H 4 HOH B 289 1476 556 HOH HOH . H 4 HOH B 290 1477 557 HOH HOH . H 4 HOH B 291 1478 558 HOH HOH . H 4 HOH B 292 1479 561 HOH HOH . H 4 HOH B 293 1480 563 HOH HOH . H 4 HOH B 294 1481 564 HOH HOH . H 4 HOH B 295 1482 568 HOH HOH . H 4 HOH B 296 1483 570 HOH HOH . H 4 HOH B 297 1484 574 HOH HOH . H 4 HOH B 298 1485 575 HOH HOH . H 4 HOH B 299 1486 576 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UDP . . . F 3 9.767 16.366 18.904 1 13.68 ? N1 UDP 1081 B 1 HETATM 2 C C2 UDP . . . F 3 10.759 16.019 18.006 1 14.19 ? C2 UDP 1081 B 1 HETATM 3 N N3 UDP . . . F 3 11.721 15.065 18.368 1 12.85 ? N3 UDP 1081 B 1 HETATM 4 C C4 UDP . . . F 3 11.697 14.434 19.616 1 14.55 ? C4 UDP 1081 B 1 HETATM 5 C C5 UDP . . . F 3 10.679 14.828 20.525 1 12.69 ? C5 UDP 1081 B 1 HETATM 6 C C6 UDP . . . F 3 9.711 15.757 20.135 1 13.66 ? C6 UDP 1081 B 1 HETATM 7 O O2 UDP . . . F 3 10.76 16.62 16.906 1 12.05 ? O2 UDP 1081 B 1 HETATM 8 O O4 UDP . . . F 3 12.552 13.575 19.903 1 13.42 ? O4 UDP 1081 B 1 HETATM 9 C C1' UDP . . . F 3 8.807 17.446 18.573 1 13.09 ? C1' UDP 1081 B 1 HETATM 10 C C2' UDP . . . F 3 7.325 17.205 18.794 1 12.16 ? C2' UDP 1081 B 1 HETATM 11 O O2' UDP . . . F 3 6.687 16.544 17.708 1 13.11 ? O2' UDP 1081 B 1 HETATM 12 C C3' UDP . . . F 3 6.838 18.626 19.011 1 10.08 ? C3' UDP 1081 B 1 HETATM 13 C C4' UDP . . . F 3 7.999 19.31 19.674 1 11.25 ? C4' UDP 1081 B 1 HETATM 14 O O4' UDP . . . F 3 9.153 18.535 19.422 1 12.31 ? O4' UDP 1081 B 1 HETATM 15 O O3' UDP . . . F 3 6.524 19.221 17.771 1 17 ? O3' UDP 1081 B 1 HETATM 16 C C5' UDP . . . F 3 7.753 19.488 21.16 1 10.27 ? C5' UDP 1081 B 1 HETATM 17 O O5' UDP . . . F 3 8.946 19.754 21.799 1 10.76 ? O5' UDP 1081 B 1 HETATM 18 P PA UDP . . . F 3 9.099 19.407 23.377 1 10.74 ? PA UDP 1081 B 1 HETATM 19 O O1A UDP . . . F 3 10.544 19.284 23.568 1 11.72 ? O1A UDP 1081 B 1 HETATM 20 O O2A UDP . . . F 3 8.3 18.178 23.702 1 10.65 ? O2A UDP 1081 B 1 HETATM 21 O O3A UDP . . . F 3 8.676 20.649 24.284 1 13.27 ? O3A UDP 1081 B 1 HETATM 22 P PB UDP . . . F 3 7.213 21.145 24.694 1 12.89 ? PB UDP 1081 B 1 HETATM 23 O O1B UDP . . . F 3 6.214 20.911 23.62 1 12.49 ? O1B UDP 1081 B 1 HETATM 24 O O2B UDP . . . F 3 7.362 22.617 24.965 1 11.36 ? O2B UDP 1081 B 1 HETATM 25 O O3B UDP . . . F 3 6.799 20.399 25.914 1 10.22 ? O3B UDP 1081 B 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #