data_3BGS # _model_server_result.job_id wwioJnxA12SE525EzKvL-w _model_server_result.datetime_utc '2024-11-25 20:44:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bgs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":302}' # _entry.id 3BGS # _exptl.entry_id 3BGS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BGS _cell.length_a 142.801 _cell.length_b 142.801 _cell.length_c 167.348 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BGS _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 298 n n P O2 PO4 sing 299 n n P O3 PO4 sing 300 n n P O4 PO4 sing 301 n n # _atom_sites.entry_id 3BGS _atom_sites.fract_transf_matrix[1][1] 0.007003 _atom_sites.fract_transf_matrix[1][2] 0.004043 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008086 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005976 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 302 302 PO4 PO4 . C 2 PO4 A 1 303 303 PO4 PO4 . D 2 PO4 A 1 304 304 PO4 PO4 . E 3 DIH A 1 301 301 DIH DIH . F 4 HOH A 1 305 4 HOH HOH . F 4 HOH A 2 306 6 HOH HOH . F 4 HOH A 3 307 7 HOH HOH . F 4 HOH A 4 308 9 HOH HOH . F 4 HOH A 5 309 11 HOH HOH . F 4 HOH A 6 310 13 HOH HOH . F 4 HOH A 7 311 14 HOH HOH . F 4 HOH A 8 312 15 HOH HOH . F 4 HOH A 9 313 16 HOH HOH . F 4 HOH A 10 314 17 HOH HOH . F 4 HOH A 11 315 19 HOH HOH . F 4 HOH A 12 316 21 HOH HOH . F 4 HOH A 13 317 22 HOH HOH . F 4 HOH A 14 318 23 HOH HOH . F 4 HOH A 15 319 24 HOH HOH . F 4 HOH A 16 320 25 HOH HOH . F 4 HOH A 17 321 26 HOH HOH . F 4 HOH A 18 322 28 HOH HOH . F 4 HOH A 19 323 31 HOH HOH . F 4 HOH A 20 324 32 HOH HOH . F 4 HOH A 21 325 34 HOH HOH . F 4 HOH A 22 326 35 HOH HOH . F 4 HOH A 23 327 36 HOH HOH . F 4 HOH A 24 328 39 HOH HOH . F 4 HOH A 25 329 41 HOH HOH . F 4 HOH A 26 330 42 HOH HOH . F 4 HOH A 27 331 43 HOH HOH . F 4 HOH A 28 332 47 HOH HOH . F 4 HOH A 29 333 48 HOH HOH . F 4 HOH A 30 334 51 HOH HOH . F 4 HOH A 31 335 54 HOH HOH . F 4 HOH A 32 336 56 HOH HOH . F 4 HOH A 33 337 57 HOH HOH . F 4 HOH A 34 338 59 HOH HOH . F 4 HOH A 35 339 60 HOH HOH . F 4 HOH A 36 340 62 HOH HOH . F 4 HOH A 37 341 64 HOH HOH . F 4 HOH A 38 342 67 HOH HOH . F 4 HOH A 39 343 68 HOH HOH . F 4 HOH A 40 344 69 HOH HOH . F 4 HOH A 41 345 71 HOH HOH . F 4 HOH A 42 346 81 HOH HOH . F 4 HOH A 43 347 87 HOH HOH . F 4 HOH A 44 348 93 HOH HOH . F 4 HOH A 45 349 94 HOH HOH . F 4 HOH A 46 350 96 HOH HOH . F 4 HOH A 47 351 98 HOH HOH . F 4 HOH A 48 352 103 HOH HOH . F 4 HOH A 49 353 104 HOH HOH . F 4 HOH A 50 354 107 HOH HOH . F 4 HOH A 51 355 112 HOH HOH . F 4 HOH A 52 356 113 HOH HOH . F 4 HOH A 53 357 115 HOH HOH . F 4 HOH A 54 358 120 HOH HOH . F 4 HOH A 55 359 133 HOH HOH . F 4 HOH A 56 360 139 HOH HOH . F 4 HOH A 57 361 140 HOH HOH . F 4 HOH A 58 362 141 HOH HOH . F 4 HOH A 59 363 142 HOH HOH . F 4 HOH A 60 364 143 HOH HOH . F 4 HOH A 61 365 154 HOH HOH . F 4 HOH A 62 366 163 HOH HOH . F 4 HOH A 63 367 168 HOH HOH . F 4 HOH A 64 368 172 HOH HOH . F 4 HOH A 65 369 173 HOH HOH . F 4 HOH A 66 370 174 HOH HOH . F 4 HOH A 67 371 175 HOH HOH . F 4 HOH A 68 372 176 HOH HOH . F 4 HOH A 69 373 177 HOH HOH . F 4 HOH A 70 374 178 HOH HOH . F 4 HOH A 71 375 179 HOH HOH . F 4 HOH A 72 376 180 HOH HOH . F 4 HOH A 73 377 182 HOH HOH . F 4 HOH A 74 378 183 HOH HOH . F 4 HOH A 75 379 184 HOH HOH . F 4 HOH A 76 380 185 HOH HOH . F 4 HOH A 77 381 186 HOH HOH . F 4 HOH A 78 382 187 HOH HOH . F 4 HOH A 79 383 188 HOH HOH . F 4 HOH A 80 384 189 HOH HOH . F 4 HOH A 81 385 190 HOH HOH . F 4 HOH A 82 386 191 HOH HOH . F 4 HOH A 83 387 192 HOH HOH . F 4 HOH A 84 388 193 HOH HOH . F 4 HOH A 85 389 194 HOH HOH . F 4 HOH A 86 390 195 HOH HOH . F 4 HOH A 87 391 196 HOH HOH . F 4 HOH A 88 392 197 HOH HOH . F 4 HOH A 89 393 199 HOH HOH . F 4 HOH A 90 394 202 HOH HOH . F 4 HOH A 91 395 203 HOH HOH . F 4 HOH A 92 396 204 HOH HOH . F 4 HOH A 93 397 206 HOH HOH . F 4 HOH A 94 398 208 HOH HOH . F 4 HOH A 95 399 209 HOH HOH . F 4 HOH A 96 400 210 HOH HOH . F 4 HOH A 97 401 211 HOH HOH . F 4 HOH A 98 402 212 HOH HOH . F 4 HOH A 99 403 213 HOH HOH . F 4 HOH A 100 404 215 HOH HOH . F 4 HOH A 101 405 217 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 -19.647 15.492 65.706 1 90.07 ? P PO4 302 A 1 HETATM 2 O O1 PO4 . . . B 2 -19.565 15.324 64.199 1 86.73 ? O1 PO4 302 A 1 HETATM 3 O O2 PO4 . . . B 2 -20.747 16.475 66.07 1 89.87 ? O2 PO4 302 A 1 HETATM 4 O O3 PO4 . . . B 2 -19.961 14.142 66.329 1 88.14 ? O3 PO4 302 A 1 HETATM 5 O O4 PO4 . . . B 2 -18.324 16.025 66.239 1 87.24 ? O4 PO4 302 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #