data_3BHB
#
_model_server_result.job_id            ELekpPr-ttr4zHPWPhy7NQ 
_model_server_result.datetime_utc      '2024-11-21 23:58:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3bhb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":275}' 
#
_entry.id    3BHB 
#
_exptl.entry_id    3BHB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.9 
_cell.angle_gamma         90 
_cell.entry_id            3BHB 
_cell.length_a            57.1 
_cell.length_b            80.2 
_cell.length_c            57.3 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BHB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf3 B SG CYS 24 B CYS 25 1_555 B SG CYS 79 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
covale ? covale1 C C ASP 3 C ASP 3 1_555 C N SEP 4 C SEP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 C C SEP 4 C SEP 4 1_555 C N PHE 5 C PHE 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3BHB 
_atom_sites.fract_transf_matrix[1][1]    0.017513 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008504 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012469 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019401 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 EDO A 1 275 1 EDO EDO . 
E 5 HOH A 1 276 1 HOH HOH . 
E 5 HOH A 2 277 2 HOH HOH . 
E 5 HOH A 3 278 3 HOH HOH . 
E 5 HOH A 4 279 4 HOH HOH . 
E 5 HOH A 5 280 5 HOH HOH . 
E 5 HOH A 6 281 6 HOH HOH . 
E 5 HOH A 7 282 7 HOH HOH . 
E 5 HOH A 8 283 8 HOH HOH . 
E 5 HOH A 9 284 9 HOH HOH . 
E 5 HOH A 10 285 10 HOH HOH . 
E 5 HOH A 11 286 12 HOH HOH . 
E 5 HOH A 12 287 14 HOH HOH . 
E 5 HOH A 13 288 15 HOH HOH . 
E 5 HOH A 14 289 16 HOH HOH . 
E 5 HOH A 15 290 17 HOH HOH . 
E 5 HOH A 16 291 18 HOH HOH . 
E 5 HOH A 17 292 19 HOH HOH . 
E 5 HOH A 18 293 20 HOH HOH . 
E 5 HOH A 19 294 21 HOH HOH . 
E 5 HOH A 20 295 22 HOH HOH . 
E 5 HOH A 21 296 24 HOH HOH . 
E 5 HOH A 22 297 26 HOH HOH . 
E 5 HOH A 23 298 27 HOH HOH . 
E 5 HOH A 24 299 29 HOH HOH . 
E 5 HOH A 25 300 30 HOH HOH . 
E 5 HOH A 26 301 31 HOH HOH . 
E 5 HOH A 27 302 32 HOH HOH . 
E 5 HOH A 28 303 33 HOH HOH . 
E 5 HOH A 29 304 34 HOH HOH . 
E 5 HOH A 30 305 36 HOH HOH . 
E 5 HOH A 31 306 37 HOH HOH . 
E 5 HOH A 32 307 38 HOH HOH . 
E 5 HOH A 33 308 39 HOH HOH . 
E 5 HOH A 34 309 40 HOH HOH . 
E 5 HOH A 35 310 42 HOH HOH . 
E 5 HOH A 36 311 43 HOH HOH . 
E 5 HOH A 37 312 44 HOH HOH . 
E 5 HOH A 38 313 45 HOH HOH . 
E 5 HOH A 39 314 46 HOH HOH . 
E 5 HOH A 40 315 47 HOH HOH . 
E 5 HOH A 41 316 48 HOH HOH . 
E 5 HOH A 42 317 49 HOH HOH . 
E 5 HOH A 43 318 50 HOH HOH . 
E 5 HOH A 44 319 51 HOH HOH . 
E 5 HOH A 45 320 53 HOH HOH . 
E 5 HOH A 46 321 54 HOH HOH . 
E 5 HOH A 47 322 57 HOH HOH . 
E 5 HOH A 48 323 58 HOH HOH . 
E 5 HOH A 49 324 59 HOH HOH . 
E 5 HOH A 50 325 60 HOH HOH . 
E 5 HOH A 51 326 61 HOH HOH . 
E 5 HOH A 52 327 62 HOH HOH . 
E 5 HOH A 53 328 64 HOH HOH . 
E 5 HOH A 54 329 65 HOH HOH . 
E 5 HOH A 55 330 67 HOH HOH . 
E 5 HOH A 56 331 68 HOH HOH . 
E 5 HOH A 57 332 71 HOH HOH . 
E 5 HOH A 58 333 72 HOH HOH . 
E 5 HOH A 59 334 73 HOH HOH . 
E 5 HOH A 60 335 74 HOH HOH . 
E 5 HOH A 61 336 78 HOH HOH . 
E 5 HOH A 62 337 79 HOH HOH . 
E 5 HOH A 63 338 80 HOH HOH . 
E 5 HOH A 64 339 81 HOH HOH . 
E 5 HOH A 65 340 82 HOH HOH . 
E 5 HOH A 66 341 84 HOH HOH . 
E 5 HOH A 67 342 87 HOH HOH . 
E 5 HOH A 68 343 88 HOH HOH . 
E 5 HOH A 69 344 90 HOH HOH . 
E 5 HOH A 70 345 91 HOH HOH . 
E 5 HOH A 71 346 93 HOH HOH . 
E 5 HOH A 72 347 94 HOH HOH . 
E 5 HOH A 73 348 95 HOH HOH . 
E 5 HOH A 74 349 96 HOH HOH . 
E 5 HOH A 75 350 98 HOH HOH . 
E 5 HOH A 76 351 99 HOH HOH . 
E 5 HOH A 77 352 100 HOH HOH . 
E 5 HOH A 78 353 101 HOH HOH . 
E 5 HOH A 79 354 102 HOH HOH . 
E 5 HOH A 80 355 103 HOH HOH . 
E 5 HOH A 81 356 106 HOH HOH . 
E 5 HOH A 82 357 107 HOH HOH . 
E 5 HOH A 83 358 108 HOH HOH . 
E 5 HOH A 84 359 109 HOH HOH . 
E 5 HOH A 85 360 110 HOH HOH . 
E 5 HOH A 86 361 111 HOH HOH . 
E 5 HOH A 87 362 112 HOH HOH . 
E 5 HOH A 88 363 114 HOH HOH . 
E 5 HOH A 89 364 115 HOH HOH . 
E 5 HOH A 90 365 117 HOH HOH . 
E 5 HOH A 91 366 118 HOH HOH . 
F 5 HOH B 1 100 11 HOH HOH . 
F 5 HOH B 2 101 13 HOH HOH . 
F 5 HOH B 3 102 23 HOH HOH . 
F 5 HOH B 4 103 28 HOH HOH . 
F 5 HOH B 5 104 35 HOH HOH . 
F 5 HOH B 6 105 41 HOH HOH . 
F 5 HOH B 7 106 52 HOH HOH . 
F 5 HOH B 8 107 56 HOH HOH . 
F 5 HOH B 9 108 63 HOH HOH . 
F 5 HOH B 10 109 66 HOH HOH . 
F 5 HOH B 11 110 69 HOH HOH . 
F 5 HOH B 12 111 70 HOH HOH . 
F 5 HOH B 13 112 76 HOH HOH . 
F 5 HOH B 14 113 77 HOH HOH . 
F 5 HOH B 15 114 83 HOH HOH . 
F 5 HOH B 16 115 85 HOH HOH . 
F 5 HOH B 17 116 86 HOH HOH . 
F 5 HOH B 18 117 89 HOH HOH . 
F 5 HOH B 19 118 97 HOH HOH . 
F 5 HOH B 20 119 104 HOH HOH . 
F 5 HOH B 21 120 105 HOH HOH . 
F 5 HOH B 22 121 119 HOH HOH . 
G 5 HOH C 1 25 25 HOH HOH . 
G 5 HOH C 2 55 55 HOH HOH . 
G 5 HOH C 3 75 75 HOH HOH . 
G 5 HOH C 4 92 92 HOH HOH . 
G 5 HOH C 5 113 113 HOH HOH . 
G 5 HOH C 6 116 116 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 20.885 11.145 11.6 1 17.86 ? C1 EDO 275 A 1 
HETATM 2 O O1 EDO . . . D 4 21.705 10.163 11.356 1 17.5 ? O1 EDO 275 A 1 
HETATM 3 C C2 EDO . . . D 4 22.008 12.107 12.007 1 15.92 ? C2 EDO 275 A 1 
HETATM 4 O O2 EDO . . . D 4 21.67 13.234 12.788 1 18.6 ? O2 EDO 275 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           232 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#