data_3BHJ # _model_server_result.job_id sxY6Bnki6f2RihCJIOjgXA _model_server_result.datetime_utc '2024-11-27 09:08:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bhj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":318}' # _entry.id 3BHJ # _exptl.entry_id 3BHJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BHJ _cell.length_a 54.644 _cell.length_b 55.473 _cell.length_c 95.736 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BHJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 169 n n C1 C2 GOL sing 170 n n C1 H11 GOL sing 171 n n C1 H12 GOL sing 172 n n O1 HO1 GOL sing 173 n n C2 O2 GOL sing 174 n n C2 C3 GOL sing 175 n n C2 H2 GOL sing 176 n n O2 HO2 GOL sing 177 n n C3 O3 GOL sing 178 n n C3 H31 GOL sing 179 n n C3 H32 GOL sing 180 n n O3 HO3 GOL sing 181 n n # _atom_sites.entry_id 3BHJ _atom_sites.fract_transf_matrix[1][1] 0.0183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010445 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 310 310 SO4 SO4 . C 2 SO4 A 1 311 311 SO4 SO4 . D 2 SO4 A 1 313 313 SO4 SO4 . E 2 SO4 A 1 314 314 SO4 SO4 . F 2 SO4 A 1 319 319 SO4 SO4 . G 2 SO4 A 1 320 320 SO4 SO4 . H 3 AB3 A 1 307 307 AB3 AB3 . I 3 AB3 A 1 308 308 AB3 AB3 . J 4 NAP A 1 309 309 NAP NAP . K 5 GSH A 1 315 315 GSH GSH . L 6 P33 A 1 316 316 P33 P33 . M 6 P33 A 1 317 317 P33 P33 . N 7 GOL A 1 318 318 GOL GOL . O 8 HOH A 1 321 1 HOH HOH . O 8 HOH A 2 322 2 HOH HOH . O 8 HOH A 3 323 3 HOH HOH . O 8 HOH A 4 324 4 HOH HOH . O 8 HOH A 5 325 5 HOH HOH . O 8 HOH A 6 326 6 HOH HOH . O 8 HOH A 7 327 7 HOH HOH . O 8 HOH A 8 328 8 HOH HOH . O 8 HOH A 9 329 9 HOH HOH . O 8 HOH A 10 330 10 HOH HOH . O 8 HOH A 11 331 11 HOH HOH . O 8 HOH A 12 332 12 HOH HOH . O 8 HOH A 13 333 13 HOH HOH . O 8 HOH A 14 334 14 HOH HOH . O 8 HOH A 15 335 15 HOH HOH . O 8 HOH A 16 336 16 HOH HOH . O 8 HOH A 17 337 17 HOH HOH . O 8 HOH A 18 338 18 HOH HOH . O 8 HOH A 19 339 19 HOH HOH . O 8 HOH A 20 340 20 HOH HOH . O 8 HOH A 21 341 21 HOH HOH . O 8 HOH A 22 342 22 HOH HOH . O 8 HOH A 23 343 23 HOH HOH . O 8 HOH A 24 344 24 HOH HOH . O 8 HOH A 25 345 25 HOH HOH . O 8 HOH A 26 346 26 HOH HOH . O 8 HOH A 27 347 27 HOH HOH . O 8 HOH A 28 348 28 HOH HOH . O 8 HOH A 29 349 29 HOH HOH . O 8 HOH A 30 350 30 HOH HOH . O 8 HOH A 31 351 31 HOH HOH . O 8 HOH A 32 352 32 HOH HOH . O 8 HOH A 33 353 33 HOH HOH . O 8 HOH A 34 354 34 HOH HOH . O 8 HOH A 35 355 35 HOH HOH . O 8 HOH A 36 356 36 HOH HOH . O 8 HOH A 37 357 37 HOH HOH . O 8 HOH A 38 358 38 HOH HOH . O 8 HOH A 39 359 39 HOH HOH . O 8 HOH A 40 360 40 HOH HOH . O 8 HOH A 41 361 41 HOH HOH . O 8 HOH A 42 362 42 HOH HOH . O 8 HOH A 43 363 43 HOH HOH . O 8 HOH A 44 364 44 HOH HOH . O 8 HOH A 45 365 45 HOH HOH . O 8 HOH A 46 366 46 HOH HOH . O 8 HOH A 47 367 47 HOH HOH . O 8 HOH A 48 368 48 HOH HOH . O 8 HOH A 49 369 49 HOH HOH . O 8 HOH A 50 370 50 HOH HOH . O 8 HOH A 51 371 51 HOH HOH . O 8 HOH A 52 372 52 HOH HOH . O 8 HOH A 53 373 53 HOH HOH . O 8 HOH A 54 374 54 HOH HOH . O 8 HOH A 55 375 55 HOH HOH . O 8 HOH A 56 376 56 HOH HOH . O 8 HOH A 57 377 57 HOH HOH . O 8 HOH A 58 378 58 HOH HOH . O 8 HOH A 59 379 59 HOH HOH . O 8 HOH A 60 380 60 HOH HOH . O 8 HOH A 61 381 61 HOH HOH . O 8 HOH A 62 382 62 HOH HOH . O 8 HOH A 63 383 63 HOH HOH . O 8 HOH A 64 384 64 HOH HOH . O 8 HOH A 65 385 65 HOH HOH . O 8 HOH A 66 386 66 HOH HOH . O 8 HOH A 67 387 67 HOH HOH . O 8 HOH A 68 388 68 HOH HOH . O 8 HOH A 69 389 69 HOH HOH . O 8 HOH A 70 390 70 HOH HOH . O 8 HOH A 71 391 71 HOH HOH . O 8 HOH A 72 392 72 HOH HOH . O 8 HOH A 73 393 73 HOH HOH . O 8 HOH A 74 394 74 HOH HOH . O 8 HOH A 75 395 75 HOH HOH . O 8 HOH A 76 396 76 HOH HOH . O 8 HOH A 77 397 77 HOH HOH . O 8 HOH A 78 398 78 HOH HOH . O 8 HOH A 79 399 79 HOH HOH . O 8 HOH A 80 400 80 HOH HOH . O 8 HOH A 81 401 81 HOH HOH . O 8 HOH A 82 402 82 HOH HOH . O 8 HOH A 83 403 83 HOH HOH . O 8 HOH A 84 404 84 HOH HOH . O 8 HOH A 85 405 85 HOH HOH . O 8 HOH A 86 406 86 HOH HOH . O 8 HOH A 87 407 87 HOH HOH . O 8 HOH A 88 408 88 HOH HOH . O 8 HOH A 89 409 89 HOH HOH . O 8 HOH A 90 410 90 HOH HOH . O 8 HOH A 91 411 91 HOH HOH . O 8 HOH A 92 412 92 HOH HOH . O 8 HOH A 93 413 93 HOH HOH . O 8 HOH A 94 414 94 HOH HOH . O 8 HOH A 95 415 95 HOH HOH . O 8 HOH A 96 416 96 HOH HOH . O 8 HOH A 97 417 97 HOH HOH . O 8 HOH A 98 418 98 HOH HOH . O 8 HOH A 99 419 99 HOH HOH . O 8 HOH A 100 420 100 HOH HOH . O 8 HOH A 101 421 101 HOH HOH . O 8 HOH A 102 422 102 HOH HOH . O 8 HOH A 103 423 103 HOH HOH . O 8 HOH A 104 424 104 HOH HOH . O 8 HOH A 105 425 105 HOH HOH . O 8 HOH A 106 426 106 HOH HOH . O 8 HOH A 107 427 107 HOH HOH . O 8 HOH A 108 428 108 HOH HOH . O 8 HOH A 109 429 109 HOH HOH . O 8 HOH A 110 430 110 HOH HOH . O 8 HOH A 111 431 111 HOH HOH . O 8 HOH A 112 432 112 HOH HOH . O 8 HOH A 113 433 113 HOH HOH . O 8 HOH A 114 434 114 HOH HOH . O 8 HOH A 115 435 115 HOH HOH . O 8 HOH A 116 436 116 HOH HOH . O 8 HOH A 117 437 117 HOH HOH . O 8 HOH A 118 438 118 HOH HOH . O 8 HOH A 119 439 119 HOH HOH . O 8 HOH A 120 440 120 HOH HOH . O 8 HOH A 121 441 121 HOH HOH . O 8 HOH A 122 442 122 HOH HOH . O 8 HOH A 123 443 123 HOH HOH . O 8 HOH A 124 444 124 HOH HOH . O 8 HOH A 125 445 125 HOH HOH . O 8 HOH A 126 446 126 HOH HOH . O 8 HOH A 127 447 127 HOH HOH . O 8 HOH A 128 448 128 HOH HOH . O 8 HOH A 129 449 129 HOH HOH . O 8 HOH A 130 450 130 HOH HOH . O 8 HOH A 131 451 131 HOH HOH . O 8 HOH A 132 452 132 HOH HOH . O 8 HOH A 133 453 133 HOH HOH . O 8 HOH A 134 454 134 HOH HOH . O 8 HOH A 135 455 135 HOH HOH . O 8 HOH A 136 456 136 HOH HOH . O 8 HOH A 137 457 137 HOH HOH . O 8 HOH A 138 458 138 HOH HOH . O 8 HOH A 139 459 139 HOH HOH . O 8 HOH A 140 460 140 HOH HOH . O 8 HOH A 141 461 141 HOH HOH . O 8 HOH A 142 462 142 HOH HOH . O 8 HOH A 143 463 143 HOH HOH . O 8 HOH A 144 464 144 HOH HOH . O 8 HOH A 145 465 145 HOH HOH . O 8 HOH A 146 466 146 HOH HOH . O 8 HOH A 147 467 147 HOH HOH . O 8 HOH A 148 468 148 HOH HOH . O 8 HOH A 149 469 149 HOH HOH . O 8 HOH A 150 470 150 HOH HOH . O 8 HOH A 151 471 151 HOH HOH . O 8 HOH A 152 472 152 HOH HOH . O 8 HOH A 153 473 153 HOH HOH . O 8 HOH A 154 474 154 HOH HOH . O 8 HOH A 155 475 155 HOH HOH . O 8 HOH A 156 476 156 HOH HOH . O 8 HOH A 157 477 157 HOH HOH . O 8 HOH A 158 478 158 HOH HOH . O 8 HOH A 159 479 159 HOH HOH . O 8 HOH A 160 480 160 HOH HOH . O 8 HOH A 161 481 161 HOH HOH . O 8 HOH A 162 482 162 HOH HOH . O 8 HOH A 163 483 163 HOH HOH . O 8 HOH A 164 484 164 HOH HOH . O 8 HOH A 165 485 165 HOH HOH . O 8 HOH A 166 486 166 HOH HOH . O 8 HOH A 167 487 167 HOH HOH . O 8 HOH A 168 488 168 HOH HOH . O 8 HOH A 169 489 169 HOH HOH . O 8 HOH A 170 490 170 HOH HOH . O 8 HOH A 171 491 171 HOH HOH . O 8 HOH A 172 492 172 HOH HOH . O 8 HOH A 173 493 173 HOH HOH . O 8 HOH A 174 494 174 HOH HOH . O 8 HOH A 175 495 175 HOH HOH . O 8 HOH A 176 496 176 HOH HOH . O 8 HOH A 177 497 177 HOH HOH . O 8 HOH A 178 498 178 HOH HOH . O 8 HOH A 179 499 179 HOH HOH . O 8 HOH A 180 500 180 HOH HOH . O 8 HOH A 181 501 181 HOH HOH . O 8 HOH A 182 502 182 HOH HOH . O 8 HOH A 183 503 183 HOH HOH . O 8 HOH A 184 504 184 HOH HOH . O 8 HOH A 185 505 185 HOH HOH . O 8 HOH A 186 506 186 HOH HOH . O 8 HOH A 187 507 187 HOH HOH . O 8 HOH A 188 508 188 HOH HOH . O 8 HOH A 189 509 189 HOH HOH . O 8 HOH A 190 510 190 HOH HOH . O 8 HOH A 191 511 191 HOH HOH . O 8 HOH A 192 512 192 HOH HOH . O 8 HOH A 193 513 193 HOH HOH . O 8 HOH A 194 514 194 HOH HOH . O 8 HOH A 195 515 195 HOH HOH . O 8 HOH A 196 516 196 HOH HOH . O 8 HOH A 197 517 197 HOH HOH . O 8 HOH A 198 518 198 HOH HOH . O 8 HOH A 199 519 199 HOH HOH . O 8 HOH A 200 520 200 HOH HOH . O 8 HOH A 201 521 201 HOH HOH . O 8 HOH A 202 522 202 HOH HOH . O 8 HOH A 203 523 203 HOH HOH . O 8 HOH A 204 524 204 HOH HOH . O 8 HOH A 205 525 205 HOH HOH . O 8 HOH A 206 526 206 HOH HOH . O 8 HOH A 207 527 207 HOH HOH . O 8 HOH A 208 528 208 HOH HOH . O 8 HOH A 209 529 209 HOH HOH . O 8 HOH A 210 530 210 HOH HOH . O 8 HOH A 211 531 211 HOH HOH . O 8 HOH A 212 532 212 HOH HOH . O 8 HOH A 213 533 213 HOH HOH . O 8 HOH A 214 534 214 HOH HOH . O 8 HOH A 215 535 215 HOH HOH . O 8 HOH A 216 536 216 HOH HOH . O 8 HOH A 217 537 217 HOH HOH . O 8 HOH A 218 538 218 HOH HOH . O 8 HOH A 219 539 219 HOH HOH . O 8 HOH A 220 540 220 HOH HOH . O 8 HOH A 221 541 221 HOH HOH . O 8 HOH A 222 542 222 HOH HOH . O 8 HOH A 223 543 223 HOH HOH . O 8 HOH A 224 544 224 HOH HOH . O 8 HOH A 225 545 225 HOH HOH . O 8 HOH A 226 546 226 HOH HOH . O 8 HOH A 227 547 227 HOH HOH . O 8 HOH A 228 548 228 HOH HOH . O 8 HOH A 229 549 229 HOH HOH . O 8 HOH A 230 550 230 HOH HOH . O 8 HOH A 231 551 231 HOH HOH . O 8 HOH A 232 552 232 HOH HOH . O 8 HOH A 233 553 233 HOH HOH . O 8 HOH A 234 554 234 HOH HOH . O 8 HOH A 235 555 235 HOH HOH . O 8 HOH A 236 556 236 HOH HOH . O 8 HOH A 237 557 237 HOH HOH . O 8 HOH A 238 558 238 HOH HOH . O 8 HOH A 239 559 239 HOH HOH . O 8 HOH A 240 560 240 HOH HOH . O 8 HOH A 241 561 241 HOH HOH . O 8 HOH A 242 562 242 HOH HOH . O 8 HOH A 243 563 243 HOH HOH . O 8 HOH A 244 564 244 HOH HOH . O 8 HOH A 245 565 245 HOH HOH . O 8 HOH A 246 566 246 HOH HOH . O 8 HOH A 247 567 247 HOH HOH . O 8 HOH A 248 568 248 HOH HOH . O 8 HOH A 249 569 249 HOH HOH . O 8 HOH A 250 570 250 HOH HOH . O 8 HOH A 251 571 251 HOH HOH . O 8 HOH A 252 572 252 HOH HOH . O 8 HOH A 253 573 253 HOH HOH . O 8 HOH A 254 574 254 HOH HOH . O 8 HOH A 255 575 255 HOH HOH . O 8 HOH A 256 576 256 HOH HOH . O 8 HOH A 257 577 257 HOH HOH . O 8 HOH A 258 578 258 HOH HOH . O 8 HOH A 259 579 259 HOH HOH . O 8 HOH A 260 580 260 HOH HOH . O 8 HOH A 261 581 261 HOH HOH . O 8 HOH A 262 582 262 HOH HOH . O 8 HOH A 263 583 263 HOH HOH . O 8 HOH A 264 584 264 HOH HOH . O 8 HOH A 265 585 265 HOH HOH . O 8 HOH A 266 586 266 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . N 7 52.201 12.131 11.288 1 43.72 ? C1 GOL 318 A 1 HETATM 2 O O1 GOL . . . N 7 52.291 13.493 11.641 1 43.5 ? O1 GOL 318 A 1 HETATM 3 C C2 GOL . . . N 7 51.434 12.022 9.985 1 43.81 ? C2 GOL 318 A 1 HETATM 4 O O2 GOL . . . N 7 50.175 12.632 10.126 1 45.37 ? O2 GOL 318 A 1 HETATM 5 C C3 GOL . . . N 7 51.264 10.566 9.583 1 43.77 ? C3 GOL 318 A 1 HETATM 6 O O3 GOL . . . N 7 51.333 10.508 8.177 1 43.33 ? O3 GOL 318 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 516 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #