data_3BHR # _model_server_result.job_id XcdFt2_BK_Qofq9PPQHqoQ _model_server_result.datetime_utc '2024-11-24 05:06:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bhr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":267}' # _entry.id 3BHR # _exptl.entry_id 3BHR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BHR _cell.length_a 71.95 _cell.length_b 71.95 _cell.length_c 115.47 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BHR _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 76.98 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C CXM 1 A CXM 1 1_555 A N LYS 2 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A SG CYS 146 A CYS 146 1_555 E C6 NDU . A NDU 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 320 n n P O2 PO4 sing 321 n n P O3 PO4 sing 322 n n P O4 PO4 sing 323 n n # _atom_sites.entry_id 3BHR _atom_sites.fract_transf_matrix[1][1] 0.013899 _atom_sites.fract_transf_matrix[1][2] 0.008024 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016049 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00866 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 267 267 PO4 PO4 . C 3 THG A 1 266 266 THG THG . D 2 PO4 A 1 268 268 PO4 PO4 . E 4 NDU A 1 265 265 NDU NDU . F 5 HOH A 1 269 1 HOH HOH . F 5 HOH A 2 270 2 HOH HOH . F 5 HOH A 3 271 3 HOH HOH . F 5 HOH A 4 272 4 HOH HOH . F 5 HOH A 5 273 5 HOH HOH . F 5 HOH A 6 274 6 HOH HOH . F 5 HOH A 7 275 7 HOH HOH . F 5 HOH A 8 276 8 HOH HOH . F 5 HOH A 9 277 9 HOH HOH . F 5 HOH A 10 278 10 HOH HOH . F 5 HOH A 11 279 11 HOH HOH . F 5 HOH A 12 280 12 HOH HOH . F 5 HOH A 13 281 13 HOH HOH . F 5 HOH A 14 282 14 HOH HOH . F 5 HOH A 15 283 15 HOH HOH . F 5 HOH A 16 284 16 HOH HOH . F 5 HOH A 17 285 17 HOH HOH . F 5 HOH A 18 286 18 HOH HOH . F 5 HOH A 19 287 19 HOH HOH . F 5 HOH A 20 288 20 HOH HOH . F 5 HOH A 21 289 21 HOH HOH . F 5 HOH A 22 290 22 HOH HOH . F 5 HOH A 23 291 23 HOH HOH . F 5 HOH A 24 292 24 HOH HOH . F 5 HOH A 25 293 25 HOH HOH . F 5 HOH A 26 294 26 HOH HOH . F 5 HOH A 27 295 27 HOH HOH . F 5 HOH A 28 296 28 HOH HOH . F 5 HOH A 29 297 29 HOH HOH . F 5 HOH A 30 298 30 HOH HOH . F 5 HOH A 31 299 31 HOH HOH . F 5 HOH A 32 300 32 HOH HOH . F 5 HOH A 33 301 33 HOH HOH . F 5 HOH A 34 302 34 HOH HOH . F 5 HOH A 35 303 35 HOH HOH . F 5 HOH A 36 304 36 HOH HOH . F 5 HOH A 37 305 37 HOH HOH . F 5 HOH A 38 306 38 HOH HOH . F 5 HOH A 39 307 39 HOH HOH . F 5 HOH A 40 308 40 HOH HOH . F 5 HOH A 41 309 41 HOH HOH . F 5 HOH A 42 310 42 HOH HOH . F 5 HOH A 43 311 43 HOH HOH . F 5 HOH A 44 312 44 HOH HOH . F 5 HOH A 45 313 45 HOH HOH . F 5 HOH A 46 314 46 HOH HOH . F 5 HOH A 47 315 47 HOH HOH . F 5 HOH A 48 316 48 HOH HOH . F 5 HOH A 49 317 49 HOH HOH . F 5 HOH A 50 318 50 HOH HOH . F 5 HOH A 51 319 51 HOH HOH . F 5 HOH A 52 320 52 HOH HOH . F 5 HOH A 53 321 53 HOH HOH . F 5 HOH A 54 322 54 HOH HOH . F 5 HOH A 55 323 55 HOH HOH . F 5 HOH A 56 324 56 HOH HOH . F 5 HOH A 57 325 57 HOH HOH . F 5 HOH A 58 326 58 HOH HOH . F 5 HOH A 59 327 59 HOH HOH . F 5 HOH A 60 328 60 HOH HOH . F 5 HOH A 61 329 61 HOH HOH . F 5 HOH A 62 330 62 HOH HOH . F 5 HOH A 63 331 63 HOH HOH . F 5 HOH A 64 332 64 HOH HOH . F 5 HOH A 65 333 65 HOH HOH . F 5 HOH A 66 334 66 HOH HOH . F 5 HOH A 67 335 67 HOH HOH . F 5 HOH A 68 336 68 HOH HOH . F 5 HOH A 69 337 69 HOH HOH . F 5 HOH A 70 338 70 HOH HOH . F 5 HOH A 71 339 72 HOH HOH . F 5 HOH A 72 340 73 HOH HOH . F 5 HOH A 73 341 74 HOH HOH . F 5 HOH A 74 342 75 HOH HOH . F 5 HOH A 75 343 76 HOH HOH . F 5 HOH A 76 344 77 HOH HOH . F 5 HOH A 77 345 78 HOH HOH . F 5 HOH A 78 346 79 HOH HOH . F 5 HOH A 79 347 80 HOH HOH . F 5 HOH A 80 348 81 HOH HOH . F 5 HOH A 81 349 82 HOH HOH . F 5 HOH A 82 350 83 HOH HOH . F 5 HOH A 83 351 84 HOH HOH . F 5 HOH A 84 352 85 HOH HOH . F 5 HOH A 85 353 86 HOH HOH . F 5 HOH A 86 354 87 HOH HOH . F 5 HOH A 87 355 88 HOH HOH . F 5 HOH A 88 356 89 HOH HOH . F 5 HOH A 89 357 90 HOH HOH . F 5 HOH A 90 358 91 HOH HOH . F 5 HOH A 91 359 92 HOH HOH . F 5 HOH A 92 360 93 HOH HOH . F 5 HOH A 93 361 94 HOH HOH . F 5 HOH A 94 362 95 HOH HOH . F 5 HOH A 95 363 96 HOH HOH . F 5 HOH A 96 364 97 HOH HOH . F 5 HOH A 97 365 98 HOH HOH . F 5 HOH A 98 366 99 HOH HOH . F 5 HOH A 99 367 100 HOH HOH . F 5 HOH A 100 368 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 54.184 -31.281 28.335 1 55.95 ? P PO4 267 A 1 HETATM 2 O O1 PO4 . . . B 2 52.795 -30.952 28.825 1 52.52 ? O1 PO4 267 A 1 HETATM 3 O O2 PO4 . . . B 2 54.218 -32.763 28.112 1 57.71 ? O2 PO4 267 A 1 HETATM 4 O O3 PO4 . . . B 2 55.201 -30.983 29.391 1 58.98 ? O3 PO4 267 A 1 HETATM 5 O O4 PO4 . . . B 2 54.735 -30.597 27.094 1 57.03 ? O4 PO4 267 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #