data_3BIB
#
_model_server_result.job_id            c61Y0kz3_ZEESssBRs96oA 
_model_server_result.datetime_utc      '2024-11-22 00:11:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3bib 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":117}' 
#
_entry.id    3BIB 
#
_exptl.entry_id    3BIB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3BIB 
_cell.length_a            66.26 
_cell.length_b            66.26 
_cell.length_c            139.39 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BIB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 18 X CYS 18 1_555 A SG CYS 90 X CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf2 A SG CYS 31 X CYS 31 1_555 A SG CYS 42 X CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf3 A SG CYS 37 X CYS 37 1_555 A SG CYS 89 X CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc1 A O VAL 94 X VAL 94 1_555 B NA NA . X NA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? 
metalc ? metalc2 A O GLY 96 X GLY 96 1_555 B NA NA . X NA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? 
metalc ? metalc3 A OD1 ASN 99 X ASN 99 1_555 B NA NA . X NA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc4 A OD1 ASP 100 X ASP 100 1_555 B NA NA . X NA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? 
metalc ? metalc5 B NA NA . X NA 117 1_555 C O4 PSF . X PSF 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc6 B NA NA . X NA 117 1_555 D O HOH . X HOH 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.896 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3BIB 
_atom_sites.fract_transf_matrix[1][1]    0.015092 
_atom_sites.fract_transf_matrix[1][2]    0.008713 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017427 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007174 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA X 1 117 117 NA NA . 
C 3 PSF X 1 118 118 PSF PSF . 
D 4 HOH X 1 119 119 HOH HOH . 
D 4 HOH X 2 120 120 HOH HOH . 
D 4 HOH X 3 121 121 HOH HOH . 
D 4 HOH X 4 122 122 HOH HOH . 
D 4 HOH X 5 123 123 HOH HOH . 
D 4 HOH X 6 124 124 HOH HOH . 
D 4 HOH X 7 125 125 HOH HOH . 
D 4 HOH X 8 126 126 HOH HOH . 
D 4 HOH X 9 127 127 HOH HOH . 
D 4 HOH X 10 128 128 HOH HOH . 
D 4 HOH X 11 129 129 HOH HOH . 
D 4 HOH X 12 130 130 HOH HOH . 
D 4 HOH X 13 131 131 HOH HOH . 
D 4 HOH X 14 132 132 HOH HOH . 
D 4 HOH X 15 133 133 HOH HOH . 
D 4 HOH X 16 134 134 HOH HOH . 
D 4 HOH X 17 135 135 HOH HOH . 
D 4 HOH X 18 136 136 HOH HOH . 
D 4 HOH X 19 137 137 HOH HOH . 
D 4 HOH X 20 138 138 HOH HOH . 
D 4 HOH X 21 139 139 HOH HOH . 
D 4 HOH X 22 140 140 HOH HOH . 
D 4 HOH X 23 141 141 HOH HOH . 
D 4 HOH X 24 142 142 HOH HOH . 
D 4 HOH X 25 143 143 HOH HOH . 
D 4 HOH X 26 144 144 HOH HOH . 
D 4 HOH X 27 145 145 HOH HOH . 
D 4 HOH X 28 146 146 HOH HOH . 
D 4 HOH X 29 147 147 HOH HOH . 
D 4 HOH X 30 148 148 HOH HOH . 
D 4 HOH X 31 149 149 HOH HOH . 
D 4 HOH X 32 150 150 HOH HOH . 
D 4 HOH X 33 151 151 HOH HOH . 
D 4 HOH X 34 152 152 HOH HOH . 
D 4 HOH X 35 153 153 HOH HOH . 
D 4 HOH X 36 154 154 HOH HOH . 
D 4 HOH X 37 155 155 HOH HOH . 
D 4 HOH X 38 156 156 HOH HOH . 
D 4 HOH X 39 157 157 HOH HOH . 
D 4 HOH X 40 158 158 HOH HOH . 
D 4 HOH X 41 159 159 HOH HOH . 
D 4 HOH X 42 160 160 HOH HOH . 
D 4 HOH X 43 161 161 HOH HOH . 
D 4 HOH X 44 162 162 HOH HOH . 
D 4 HOH X 45 163 163 HOH HOH . 
D 4 HOH X 46 164 164 HOH HOH . 
D 4 HOH X 47 165 165 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               10.155 
_atom_site.Cartn_y               -33.037 
_atom_site.Cartn_z               27.201 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        34.33 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           117 
_atom_site.auth_asym_id          X 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           250 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#