data_3BJC # _model_server_result.job_id GvxDsptshmLt_vV_CqGzzA _model_server_result.datetime_utc '2024-11-05 03:26:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bjc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":901}' # _entry.id 3BJC # _exptl.entry_id 3BJC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 397.472 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-ethoxy-4-(1-methyl-7-oxo-3-propyl-6,7-dihydro-1H-pyrazolo[4,3-d]pyrimidin-5-yl)thiophene-2-sulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BJC _cell.length_a 73.755 _cell.length_b 73.755 _cell.length_c 132.509 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BJC _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 620 A HIS 617 1_555 B ZN ZN . A ZN 876 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc2 A NE2 HIS 656 A HIS 653 1_555 B ZN ZN . A ZN 876 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc3 A OD2 ASP 657 A ASP 654 1_555 B ZN ZN . A ZN 876 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc4 A OD1 ASP 657 A ASP 654 1_555 C MG MG . A MG 877 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc5 A OD1 ASP 767 A ASP 764 1_555 B ZN ZN . A ZN 876 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc6 B ZN ZN . A ZN 876 1_555 E O HOH . A HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? # _chem_comp.formula 'C15 H19 N5 O4 S2' _chem_comp.formula_weight 397.472 _chem_comp.id WAN _chem_comp.mon_nstd_flag . _chem_comp.name 5-ethoxy-4-(1-methyl-7-oxo-3-propyl-6,7-dihydro-1H-pyrazolo[4,3-d]pyrimidin-5-yl)thiophene-2-sulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C25 WAN sing 376 n n C25 C24 WAN sing 377 n n C24 C23 WAN sing 378 n n C23 C18 WAN sing 379 n y C23 N22 WAN doub 380 n y C18 N17 WAN sing 381 n n C18 C19 WAN doub 382 n y N17 C13 WAN doub 383 n n N22 N20 WAN sing 384 n y N20 C21 WAN sing 385 n n N20 C19 WAN sing 386 n y C19 C15 WAN sing 387 n n C15 O16 WAN doub 388 n n C15 N14 WAN sing 389 n n N14 C13 WAN sing 390 n n C13 C12 WAN sing 391 n n C12 C6 WAN sing 392 n y C12 C8 WAN doub 393 n y C6 C5 WAN doub 394 n y C5 S2 WAN sing 395 n n C5 S7 WAN sing 396 n y S2 O3 WAN doub 397 n n S2 O4 WAN doub 398 n n S2 N1 WAN sing 399 n n S7 C8 WAN sing 400 n y C8 O9 WAN sing 401 n n O9 C10 WAN sing 402 n n C10 C11 WAN sing 403 n n C26 H26 WAN sing 404 n n C26 H26A WAN sing 405 n n C26 H26B WAN sing 406 n n C25 H25 WAN sing 407 n n C25 H25A WAN sing 408 n n C24 H24 WAN sing 409 n n C24 H24A WAN sing 410 n n C21 H21 WAN sing 411 n n C21 H21A WAN sing 412 n n C21 H21B WAN sing 413 n n N14 HN14 WAN sing 414 n n C6 H6 WAN sing 415 n n N1 HN1 WAN sing 416 n n N1 HN1A WAN sing 417 n n C10 H10 WAN sing 418 n n C10 H10A WAN sing 419 n n C11 H11 WAN sing 420 n n C11 H11A WAN sing 421 n n C11 H11B WAN sing 422 n n # _atom_sites.entry_id 3BJC _atom_sites.fract_transf_matrix[1][1] 0.013558 _atom_sites.fract_transf_matrix[1][2] 0.007828 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015656 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007547 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 876 501 ZN ZN . C 3 MG A 1 877 502 MG MG . D 4 WAN A 1 901 901 WAN WAN . E 5 HOH A 1 902 1 HOH TIP . E 5 HOH A 2 903 2 HOH TIP . E 5 HOH A 3 904 3 HOH TIP . E 5 HOH A 4 905 4 HOH TIP . E 5 HOH A 5 906 5 HOH TIP . E 5 HOH A 6 907 6 HOH TIP . E 5 HOH A 7 908 7 HOH TIP . E 5 HOH A 8 909 8 HOH TIP . E 5 HOH A 9 910 9 HOH TIP . E 5 HOH A 10 911 10 HOH TIP . E 5 HOH A 11 912 11 HOH TIP . E 5 HOH A 12 913 12 HOH TIP . E 5 HOH A 13 914 13 HOH TIP . E 5 HOH A 14 915 14 HOH TIP . E 5 HOH A 15 916 15 HOH TIP . E 5 HOH A 16 917 16 HOH TIP . E 5 HOH A 17 918 17 HOH TIP . E 5 HOH A 18 919 18 HOH TIP . E 5 HOH A 19 920 19 HOH TIP . E 5 HOH A 20 921 20 HOH TIP . E 5 HOH A 21 922 21 HOH TIP . E 5 HOH A 22 923 22 HOH TIP . E 5 HOH A 23 924 23 HOH TIP . E 5 HOH A 24 925 24 HOH TIP . E 5 HOH A 25 926 25 HOH TIP . E 5 HOH A 26 927 26 HOH TIP . E 5 HOH A 27 928 27 HOH TIP . E 5 HOH A 28 929 28 HOH TIP . E 5 HOH A 29 930 29 HOH TIP . E 5 HOH A 30 931 30 HOH TIP . E 5 HOH A 31 932 31 HOH TIP . E 5 HOH A 32 933 32 HOH TIP . E 5 HOH A 33 934 33 HOH TIP . E 5 HOH A 34 935 34 HOH TIP . E 5 HOH A 35 936 35 HOH TIP . E 5 HOH A 36 937 36 HOH TIP . E 5 HOH A 37 938 37 HOH TIP . E 5 HOH A 38 939 38 HOH TIP . E 5 HOH A 39 940 39 HOH TIP . E 5 HOH A 40 941 40 HOH TIP . E 5 HOH A 41 942 41 HOH TIP . E 5 HOH A 42 943 42 HOH TIP . E 5 HOH A 43 944 43 HOH TIP . E 5 HOH A 44 945 44 HOH TIP . E 5 HOH A 45 946 45 HOH TIP . E 5 HOH A 46 947 46 HOH TIP . E 5 HOH A 47 948 47 HOH TIP . E 5 HOH A 48 949 48 HOH TIP . E 5 HOH A 49 950 49 HOH TIP . E 5 HOH A 50 951 50 HOH TIP . E 5 HOH A 51 952 51 HOH TIP . E 5 HOH A 52 953 52 HOH TIP . E 5 HOH A 53 954 53 HOH TIP . E 5 HOH A 54 955 54 HOH TIP . E 5 HOH A 55 956 55 HOH TIP . E 5 HOH A 56 957 56 HOH TIP . E 5 HOH A 57 958 57 HOH TIP . E 5 HOH A 58 959 58 HOH TIP . E 5 HOH A 59 960 59 HOH TIP . E 5 HOH A 60 961 60 HOH TIP . E 5 HOH A 61 962 61 HOH TIP . E 5 HOH A 62 963 62 HOH TIP . E 5 HOH A 63 964 63 HOH TIP . E 5 HOH A 64 965 64 HOH TIP . E 5 HOH A 65 966 65 HOH TIP . E 5 HOH A 66 967 66 HOH TIP . E 5 HOH A 67 968 67 HOH TIP . E 5 HOH A 68 969 68 HOH TIP . E 5 HOH A 69 970 69 HOH TIP . E 5 HOH A 70 971 70 HOH TIP . E 5 HOH A 71 972 71 HOH TIP . E 5 HOH A 72 973 72 HOH TIP . E 5 HOH A 73 974 73 HOH TIP . E 5 HOH A 74 975 74 HOH TIP . E 5 HOH A 75 976 75 HOH TIP . E 5 HOH A 76 977 76 HOH TIP . E 5 HOH A 77 978 77 HOH TIP . E 5 HOH A 78 979 78 HOH TIP . E 5 HOH A 79 980 79 HOH TIP . E 5 HOH A 80 981 80 HOH TIP . E 5 HOH A 81 982 81 HOH TIP . E 5 HOH A 82 983 82 HOH TIP . E 5 HOH A 83 984 83 HOH TIP . E 5 HOH A 84 985 84 HOH TIP . E 5 HOH A 85 986 85 HOH TIP . E 5 HOH A 86 987 86 HOH TIP . E 5 HOH A 87 988 87 HOH TIP . E 5 HOH A 88 989 88 HOH TIP . E 5 HOH A 89 990 89 HOH TIP . E 5 HOH A 90 991 90 HOH TIP . E 5 HOH A 91 992 91 HOH TIP . E 5 HOH A 92 993 92 HOH TIP . E 5 HOH A 93 994 93 HOH TIP . E 5 HOH A 94 995 94 HOH TIP . E 5 HOH A 95 996 95 HOH TIP . E 5 HOH A 96 997 96 HOH TIP . E 5 HOH A 97 998 97 HOH TIP . E 5 HOH A 98 999 98 HOH TIP . E 5 HOH A 99 1000 99 HOH TIP . E 5 HOH A 100 1001 100 HOH TIP . E 5 HOH A 101 1002 101 HOH TIP . E 5 HOH A 102 1003 102 HOH TIP . E 5 HOH A 103 1004 103 HOH TIP . E 5 HOH A 104 1005 104 HOH TIP . E 5 HOH A 105 1006 105 HOH TIP . E 5 HOH A 106 1007 106 HOH TIP . E 5 HOH A 107 1008 107 HOH TIP . E 5 HOH A 108 1009 108 HOH TIP . E 5 HOH A 109 1010 109 HOH TIP . E 5 HOH A 110 1011 110 HOH TIP . E 5 HOH A 111 1012 111 HOH TIP . E 5 HOH A 112 1013 112 HOH TIP . E 5 HOH A 113 1014 113 HOH TIP . E 5 HOH A 114 1015 114 HOH TIP . E 5 HOH A 115 1016 115 HOH TIP . E 5 HOH A 116 1017 116 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C26 WAN . . . D 4 43.648 10.709 50.475 1 39.39 ? C26 WAN 901 A 1 HETATM 2 C C25 WAN . . . D 4 43.872 12.009 49.699 1 37.12 ? C25 WAN 901 A 1 HETATM 3 C C24 WAN . . . D 4 42.678 12.952 49.856 1 33.39 ? C24 WAN 901 A 1 HETATM 4 C C23 WAN . . . D 4 43.136 14.409 49.956 1 31.68 ? C23 WAN 901 A 1 HETATM 5 C C18 WAN . . . D 4 43.679 15.174 48.932 1 31.09 ? C18 WAN 901 A 1 HETATM 6 N N17 WAN . . . D 4 43.969 14.936 47.645 1 31.54 ? N17 WAN 901 A 1 HETATM 7 N N22 WAN . . . D 4 43.074 15.188 51.034 1 31.2 ? N22 WAN 901 A 1 HETATM 8 N N20 WAN . . . D 4 43.506 16.312 50.773 1 32.67 ? N20 WAN 901 A 1 HETATM 9 C C21 WAN . . . D 4 43.538 17.427 51.746 1 29.4 ? C21 WAN 901 A 1 HETATM 10 C C19 WAN . . . D 4 43.909 16.416 49.509 1 30.07 ? C19 WAN 901 A 1 HETATM 11 C C15 WAN . . . D 4 44.455 17.435 48.74 1 30.26 ? C15 WAN 901 A 1 HETATM 12 O O16 WAN . . . D 4 44.66 18.552 49.213 1 28.4 ? O16 WAN 901 A 1 HETATM 13 N N14 WAN . . . D 4 44.754 17.167 47.399 1 29.35 ? N14 WAN 901 A 1 HETATM 14 C C13 WAN . . . D 4 44.495 15.896 46.871 1 32.82 ? C13 WAN 901 A 1 HETATM 15 C C12 WAN . . . D 4 44.764 15.643 45.53 1 33.96 ? C12 WAN 901 A 1 HETATM 16 C C6 WAN . . . D 4 43.94 15.05 44.661 1 33.92 ? C6 WAN 901 A 1 HETATM 17 C C5 WAN . . . D 4 44.396 14.967 43.412 1 38.2 ? C5 WAN 901 A 1 HETATM 18 S S2 WAN . . . D 4 43.51 14.318 42.051 1 39.27 ? S2 WAN 901 A 1 HETATM 19 O O3 WAN . . . D 4 42.047 14.286 42.38 1 41.02 ? O3 WAN 901 A 1 HETATM 20 O O4 WAN . . . D 4 43.996 12.929 41.764 1 39.98 ? O4 WAN 901 A 1 HETATM 21 N N1 WAN . . . D 4 43.759 15.274 40.756 1 41.22 ? N1 WAN 901 A 1 HETATM 22 S S7 WAN . . . D 4 45.956 15.663 43.305 1 35.61 ? S7 WAN 901 A 1 HETATM 23 C C8 WAN . . . D 4 45.966 16.066 44.97 1 34.36 ? C8 WAN 901 A 1 HETATM 24 O O9 WAN . . . D 4 46.97 16.699 45.635 1 33.5 ? O9 WAN 901 A 1 HETATM 25 C C10 WAN . . . D 4 47.867 17.315 44.698 1 33.45 ? C10 WAN 901 A 1 HETATM 26 C C11 WAN . . . D 4 49.134 17.748 45.438 1 33.05 ? C11 WAN 901 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #