data_3BJI # _model_server_result.job_id 6MgyQXocn5S5eQvK-JKKVg _model_server_result.datetime_utc '2024-12-22 01:17:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bji # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1}' # _entry.id 3BJI # _exptl.entry_id 3BJI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.87 _cell.angle_gamma 90 _cell.entry_id 3BJI _cell.length_a 78.948 _cell.length_b 75.079 _cell.length_c 114.857 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BJI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,I,L 1 1 B,C,G,H,J,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E ZN ZN . A ZN 1 1_555 A SG CYS 341 A CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc2 E ZN ZN . A ZN 1 1_555 A SG CYS 344 A CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc3 E ZN ZN . A ZN 1 1_555 A ND1 HIS 366 A HIS 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc4 E ZN ZN . A ZN 1 1_555 A SG CYS 369 A CYS 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc5 F ZN ZN . A ZN 4 1_555 A ND1 HIS 328 A HIS 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc6 F ZN ZN . A ZN 4 1_555 A SG CYS 358 A CYS 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc7 F ZN ZN . A ZN 4 1_555 A SG CYS 361 A CYS 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc8 F ZN ZN . A ZN 4 1_555 A SG CYS 376 A CYS 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc9 G ZN ZN . B ZN 2 1_555 B ND1 HIS 328 B HIS 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? metalc ? metalc10 G ZN ZN . B ZN 2 1_555 B SG CYS 358 B CYS 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc11 G ZN ZN . B ZN 2 1_555 B SG CYS 361 B CYS 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc12 G ZN ZN . B ZN 2 1_555 B SG CYS 376 B CYS 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc13 H ZN ZN . B ZN 3 1_555 B SG CYS 341 B CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc14 H ZN ZN . B ZN 3 1_555 B SG CYS 344 B CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc15 H ZN ZN . B ZN 3 1_555 B ND1 HIS 366 B HIS 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.857 ? metalc ? metalc16 H ZN ZN . B ZN 3 1_555 B SG CYS 369 B CYS 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3BJI _atom_sites.fract_transf_matrix[1][1] 0.012667 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003129 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013319 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008968 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 1 1 ZN ZN . F 3 ZN A 1 4 4 ZN ZN . G 3 ZN B 1 2 2 ZN ZN . H 3 ZN B 1 3 3 ZN ZN . I 4 HOH A 1 567 3 HOH HOH . I 4 HOH A 2 568 6 HOH HOH . I 4 HOH A 3 569 10 HOH HOH . I 4 HOH A 4 570 28 HOH HOH . I 4 HOH A 5 571 54 HOH HOH . I 4 HOH A 6 572 56 HOH HOH . I 4 HOH A 7 573 61 HOH HOH . I 4 HOH A 8 574 65 HOH HOH . I 4 HOH A 9 575 69 HOH HOH . I 4 HOH A 10 576 72 HOH HOH . I 4 HOH A 11 577 77 HOH HOH . I 4 HOH A 12 578 4 HOH HOH . I 4 HOH A 13 579 13 HOH HOH . I 4 HOH A 14 580 14 HOH HOH . I 4 HOH A 15 581 20 HOH HOH . I 4 HOH A 16 582 2 HOH HOH . I 4 HOH A 17 583 3 HOH HOH . I 4 HOH A 18 584 14 HOH HOH . I 4 HOH A 19 585 31 HOH HOH . I 4 HOH A 20 586 32 HOH HOH . I 4 HOH A 21 587 33 HOH HOH . I 4 HOH A 22 588 39 HOH HOH . I 4 HOH A 23 589 40 HOH HOH . I 4 HOH A 24 590 54 HOH HOH . I 4 HOH A 25 591 56 HOH HOH . I 4 HOH A 26 592 57 HOH HOH . I 4 HOH A 27 593 60 HOH HOH . I 4 HOH A 28 594 61 HOH HOH . I 4 HOH A 29 595 62 HOH HOH . I 4 HOH A 30 596 66 HOH HOH . I 4 HOH A 31 597 68 HOH HOH . I 4 HOH A 32 598 70 HOH HOH . I 4 HOH A 33 599 82 HOH HOH . I 4 HOH A 34 600 86 HOH HOH . I 4 HOH A 35 601 96 HOH HOH . J 4 HOH B 1 34 34 HOH HOH . J 4 HOH B 2 72 72 HOH HOH . J 4 HOH B 3 90 90 HOH HOH . K 4 HOH C 1 178 29 HOH HOH . K 4 HOH C 2 179 73 HOH HOH . K 4 HOH C 3 180 5 HOH HOH . K 4 HOH C 4 181 15 HOH HOH . K 4 HOH C 5 182 15 HOH HOH . K 4 HOH C 6 183 22 HOH HOH . K 4 HOH C 7 184 34 HOH HOH . K 4 HOH C 8 185 37 HOH HOH . K 4 HOH C 9 186 45 HOH HOH . K 4 HOH C 10 187 50 HOH HOH . K 4 HOH C 11 188 51 HOH HOH . K 4 HOH C 12 189 52 HOH HOH . K 4 HOH C 13 190 64 HOH HOH . K 4 HOH C 14 191 81 HOH HOH . L 4 HOH D 1 178 12 HOH HOH . L 4 HOH D 2 179 31 HOH HOH . L 4 HOH D 3 180 6 HOH HOH . L 4 HOH D 4 181 48 HOH HOH . L 4 HOH D 5 182 59 HOH HOH . L 4 HOH D 6 183 65 HOH HOH . L 4 HOH D 7 184 78 HOH HOH . L 4 HOH D 8 185 83 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 20.207 _atom_site.Cartn_y 49.078 _atom_site.Cartn_z 82.209 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 478 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #