data_3BJT # _model_server_result.job_id xrXvR6jrwS0zV4s-prmmiw _model_server_result.datetime_utc '2024-11-28 06:26:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bjt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":903}' # _entry.id 3BJT # _exptl.entry_id 3BJT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 88.019 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXALATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 69.82 _cell.angle_beta 77.74 _cell.angle_gamma 67.97 _cell.entry_id 3BJT _cell.length_a 74.634 _cell.length_b 80.707 _cell.length_c 107.597 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BJT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C OD2 ASP 112 C ASP 113 1_555 J MG MG . C MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? metalc ? metalc2 D OD2 ASP 112 D ASP 113 1_555 L MG MG . D MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? # _chem_comp.formula 'C2 O4 -2' _chem_comp.formula_weight 88.019 _chem_comp.id OXL _chem_comp.mon_nstd_flag . _chem_comp.name 'OXALATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OXL sing 237 n n C1 O1 OXL doub 238 n n C1 O3 OXL sing 239 n n C2 O2 OXL doub 240 n n C2 O4 OXL sing 241 n n # _atom_sites.entry_id 3BJT _atom_sites.fract_transf_matrix[1][1] 0.013399 _atom_sites.fract_transf_matrix[1][2] -0.005422 _atom_sites.fract_transf_matrix[1][3] -0.001385 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013366 _atom_sites.fract_transf_matrix[2][3] -0.004094 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 OXL A 1 901 901 OXL OXL . F 3 MG A 1 1 1 MG MG2 . G 2 OXL B 1 902 902 OXL OXL . H 3 MG B 1 903 2 MG MG2 . I 2 OXL C 1 903 903 OXL OXL . J 3 MG C 1 904 3 MG MG2 . K 2 OXL D 1 904 904 OXL OXL . L 3 MG D 1 905 4 MG MG2 . M 4 HOH A 1 902 5 HOH TIP . M 4 HOH A 2 903 9 HOH TIP . M 4 HOH A 3 904 11 HOH TIP . M 4 HOH A 4 905 13 HOH TIP . M 4 HOH A 5 906 16 HOH TIP . M 4 HOH A 6 907 18 HOH TIP . M 4 HOH A 7 908 29 HOH TIP . M 4 HOH A 8 909 31 HOH TIP . M 4 HOH A 9 910 33 HOH TIP . M 4 HOH A 10 911 37 HOH TIP . M 4 HOH A 11 912 44 HOH TIP . M 4 HOH A 12 913 51 HOH TIP . M 4 HOH A 13 914 52 HOH TIP . M 4 HOH A 14 915 56 HOH TIP . M 4 HOH A 15 916 58 HOH TIP . M 4 HOH A 16 917 60 HOH TIP . M 4 HOH A 17 918 71 HOH TIP . M 4 HOH A 18 919 72 HOH TIP . M 4 HOH A 19 920 78 HOH TIP . M 4 HOH A 20 921 81 HOH TIP . M 4 HOH A 21 922 83 HOH TIP . M 4 HOH A 22 923 86 HOH TIP . M 4 HOH A 23 924 97 HOH TIP . M 4 HOH A 24 925 99 HOH TIP . M 4 HOH A 25 926 100 HOH TIP . M 4 HOH A 26 927 101 HOH TIP . M 4 HOH A 27 928 110 HOH TIP . M 4 HOH A 28 929 114 HOH TIP . M 4 HOH A 29 930 116 HOH TIP . M 4 HOH A 30 931 122 HOH TIP . M 4 HOH A 31 932 123 HOH TIP . M 4 HOH A 32 933 124 HOH TIP . M 4 HOH A 33 934 129 HOH TIP . M 4 HOH A 34 935 130 HOH TIP . M 4 HOH A 35 936 131 HOH TIP . M 4 HOH A 36 937 140 HOH TIP . M 4 HOH A 37 938 144 HOH TIP . M 4 HOH A 38 939 145 HOH TIP . M 4 HOH A 39 940 150 HOH TIP . M 4 HOH A 40 941 152 HOH TIP . M 4 HOH A 41 942 153 HOH TIP . N 4 HOH B 1 904 4 HOH TIP . N 4 HOH B 2 905 12 HOH TIP . N 4 HOH B 3 906 17 HOH TIP . N 4 HOH B 4 907 19 HOH TIP . N 4 HOH B 5 908 20 HOH TIP . N 4 HOH B 6 909 23 HOH TIP . N 4 HOH B 7 910 25 HOH TIP . N 4 HOH B 8 911 27 HOH TIP . N 4 HOH B 9 912 30 HOH TIP . N 4 HOH B 10 913 32 HOH TIP . N 4 HOH B 11 914 35 HOH TIP . N 4 HOH B 12 915 49 HOH TIP . N 4 HOH B 13 916 53 HOH TIP . N 4 HOH B 14 917 54 HOH TIP . N 4 HOH B 15 918 61 HOH TIP . N 4 HOH B 16 919 63 HOH TIP . N 4 HOH B 17 920 70 HOH TIP . N 4 HOH B 18 921 73 HOH TIP . N 4 HOH B 19 922 74 HOH TIP . N 4 HOH B 20 923 80 HOH TIP . N 4 HOH B 21 924 85 HOH TIP . N 4 HOH B 22 925 94 HOH TIP . N 4 HOH B 23 926 95 HOH TIP . N 4 HOH B 24 927 98 HOH TIP . N 4 HOH B 25 928 104 HOH TIP . N 4 HOH B 26 929 106 HOH TIP . N 4 HOH B 27 930 109 HOH TIP . N 4 HOH B 28 931 111 HOH TIP . N 4 HOH B 29 932 113 HOH TIP . N 4 HOH B 30 933 115 HOH TIP . N 4 HOH B 31 934 119 HOH TIP . N 4 HOH B 32 935 120 HOH TIP . N 4 HOH B 33 936 121 HOH TIP . N 4 HOH B 34 937 126 HOH TIP . N 4 HOH B 35 938 134 HOH TIP . N 4 HOH B 36 939 148 HOH TIP . N 4 HOH B 37 940 154 HOH TIP . N 4 HOH B 38 941 157 HOH TIP . O 4 HOH C 1 905 7 HOH TIP . O 4 HOH C 2 906 8 HOH TIP . O 4 HOH C 3 907 14 HOH TIP . O 4 HOH C 4 908 21 HOH TIP . O 4 HOH C 5 909 24 HOH TIP . O 4 HOH C 6 910 26 HOH TIP . O 4 HOH C 7 911 28 HOH TIP . O 4 HOH C 8 912 34 HOH TIP . O 4 HOH C 9 913 39 HOH TIP . O 4 HOH C 10 914 41 HOH TIP . O 4 HOH C 11 915 42 HOH TIP . O 4 HOH C 12 916 46 HOH TIP . O 4 HOH C 13 917 47 HOH TIP . O 4 HOH C 14 918 50 HOH TIP . O 4 HOH C 15 919 55 HOH TIP . O 4 HOH C 16 920 57 HOH TIP . O 4 HOH C 17 921 59 HOH TIP . O 4 HOH C 18 922 64 HOH TIP . O 4 HOH C 19 923 67 HOH TIP . O 4 HOH C 20 924 68 HOH TIP . O 4 HOH C 21 925 69 HOH TIP . O 4 HOH C 22 926 76 HOH TIP . O 4 HOH C 23 927 77 HOH TIP . O 4 HOH C 24 928 79 HOH TIP . O 4 HOH C 25 929 87 HOH TIP . O 4 HOH C 26 930 88 HOH TIP . O 4 HOH C 27 931 89 HOH TIP . O 4 HOH C 28 932 93 HOH TIP . O 4 HOH C 29 933 118 HOH TIP . O 4 HOH C 30 934 125 HOH TIP . O 4 HOH C 31 935 127 HOH TIP . O 4 HOH C 32 936 132 HOH TIP . O 4 HOH C 33 937 133 HOH TIP . O 4 HOH C 34 938 139 HOH TIP . O 4 HOH C 35 939 141 HOH TIP . O 4 HOH C 36 940 146 HOH TIP . O 4 HOH C 37 941 151 HOH TIP . O 4 HOH C 38 942 155 HOH TIP . P 4 HOH D 1 906 10 HOH TIP . P 4 HOH D 2 907 15 HOH TIP . P 4 HOH D 3 908 22 HOH TIP . P 4 HOH D 4 909 36 HOH TIP . P 4 HOH D 5 910 38 HOH TIP . P 4 HOH D 6 911 48 HOH TIP . P 4 HOH D 7 912 65 HOH TIP . P 4 HOH D 8 913 66 HOH TIP . P 4 HOH D 9 914 82 HOH TIP . P 4 HOH D 10 915 84 HOH TIP . P 4 HOH D 11 916 91 HOH TIP . P 4 HOH D 12 917 92 HOH TIP . P 4 HOH D 13 918 96 HOH TIP . P 4 HOH D 14 919 102 HOH TIP . P 4 HOH D 15 920 103 HOH TIP . P 4 HOH D 16 921 105 HOH TIP . P 4 HOH D 17 922 136 HOH TIP . P 4 HOH D 18 923 143 HOH TIP . P 4 HOH D 19 924 149 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OXL . . . I 2 -33.841 0.516 -5.779 1 51.65 ? C1 OXL 903 C 1 HETATM 2 C C2 OXL . . . I 2 -32.281 0.387 -5.789 1 49.69 ? C2 OXL 903 C 1 HETATM 3 O O1 OXL . . . I 2 -34.25 1.639 -6.132 1 50.91 ? O1 OXL 903 C 1 HETATM 4 O O2 OXL . . . I 2 -31.773 -0.71 -5.45 1 48.21 ? O2 OXL 903 C 1 HETATM 5 O O3 OXL . . . I 2 -34.579 -0.483 -5.431 1 49.44 ? O3 OXL 903 C 1 HETATM 6 O O4 OXL . . . I 2 -31.65 1.416 -6.144 1 49.05 ? O4 OXL 903 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #