data_3BJY # _model_server_result.job_id SWVcUm-XRntrDHho5jP8LA _model_server_result.datetime_utc '2024-12-15 10:37:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bjy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":298}' # _entry.id 3BJY # _exptl.entry_id 3BJY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BJY _cell.length_a 181.062 _cell.length_b 199.578 _cell.length_c 55.677 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BJY _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 B N1 DG 5 T DG 5 1_555 C N3 DOC 12 P DOC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N2 DG 5 T DG 5 1_555 C O2 DOC 12 P DOC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O6 DG 5 T DG 5 1_555 C N4 DOC 12 P DOC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N3 DT 6 T DT 6 1_555 C N1 DA 11 P DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B O4 DT 6 T DT 6 1_555 C N6 DA 11 P DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N1 DA 7 T DA 7 1_555 C N3 DT 10 P DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N6 DA 7 T DA 7 1_555 C O4 DT 10 P DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N1 DG 8 T DG 8 1_555 C N3 DC 9 P DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N2 DG 8 T DG 8 1_555 C O2 DC 9 P DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B O6 DG 8 T DG 8 1_555 C N4 DC 9 P DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N1 DG 9 T DG 9 1_555 C N3 DC 8 P DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N2 DG 9 T DG 9 1_555 C O2 DC 8 P DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B O6 DG 9 T DG 9 1_555 C N4 DC 8 P DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N1 DG 10 T DG 10 1_555 C N3 DC 7 P DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N2 DG 10 T DG 10 1_555 C O2 DC 7 P DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B O6 DG 10 T DG 10 1_555 C N4 DC 7 P DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N1 DG 11 T DG 11 1_555 C N3 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N2 DG 11 T DG 11 1_555 C O2 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B O6 DG 11 T DG 11 1_555 C N4 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N1 DA 12 T DA 12 1_555 C N3 DT 5 P DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B N6 DA 12 T DA 12 1_555 C O4 DT 5 P DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N1 DG 13 T DG 13 1_555 C N3 DC 4 P DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B N2 DG 13 T DG 13 1_555 C O2 DC 4 P DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B O6 DG 13 T DG 13 1_555 C N4 DC 4 P DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 B N1 DG 14 T DG 14 1_555 C N3 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 B N2 DG 14 T DG 14 1_555 C O2 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 B O6 DG 14 T DG 14 1_555 C N4 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 B N1 DA 15 T DA 15 1_555 C N3 DT 2 P DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 B N6 DA 15 T DA 15 1_555 C O4 DT 2 P DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 B N3 DT 16 T DT 16 1_555 C N1 DA 1 P DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 B O4 DT 16 T DT 16 1_555 C N6 DA 1 P DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3BJY _atom_sites.fract_transf_matrix[1][1] 0.005523 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005011 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DCP A 1 739 739 DCP DCP . E 5 MG A 1 297 297 MG MG . F 5 MG A 1 298 298 MG MG . G 6 HOH A 1 740 740 HOH HOH . G 6 HOH A 2 741 741 HOH HOH . G 6 HOH A 3 742 742 HOH HOH . G 6 HOH A 4 743 743 HOH HOH . G 6 HOH A 5 744 744 HOH HOH . G 6 HOH A 6 745 745 HOH HOH . G 6 HOH A 7 746 746 HOH HOH . G 6 HOH A 8 747 747 HOH HOH . G 6 HOH A 9 748 748 HOH HOH . G 6 HOH A 10 749 749 HOH HOH . G 6 HOH A 11 750 750 HOH HOH . G 6 HOH A 12 751 751 HOH HOH . G 6 HOH A 13 752 752 HOH HOH . G 6 HOH A 14 753 753 HOH HOH . G 6 HOH A 15 754 754 HOH HOH . G 6 HOH A 16 755 755 HOH HOH . G 6 HOH A 17 756 756 HOH HOH . G 6 HOH A 18 757 757 HOH HOH . G 6 HOH A 19 758 758 HOH HOH . G 6 HOH A 20 759 759 HOH HOH . G 6 HOH A 21 760 760 HOH HOH . G 6 HOH A 22 761 761 HOH HOH . G 6 HOH A 23 762 762 HOH HOH . G 6 HOH A 24 763 763 HOH HOH . G 6 HOH A 25 764 764 HOH HOH . G 6 HOH A 26 765 765 HOH HOH . G 6 HOH A 27 766 766 HOH HOH . G 6 HOH A 28 767 767 HOH HOH . G 6 HOH A 29 768 768 HOH HOH . G 6 HOH A 30 769 769 HOH HOH . G 6 HOH A 31 770 770 HOH HOH . G 6 HOH A 32 771 771 HOH HOH . G 6 HOH A 33 772 772 HOH HOH . G 6 HOH A 34 773 773 HOH HOH . G 6 HOH A 35 774 774 HOH HOH . G 6 HOH A 36 775 775 HOH HOH . G 6 HOH A 37 776 776 HOH HOH . G 6 HOH A 38 777 777 HOH HOH . G 6 HOH A 39 778 778 HOH HOH . G 6 HOH A 40 779 779 HOH HOH . G 6 HOH A 41 780 780 HOH HOH . G 6 HOH A 42 781 781 HOH HOH . G 6 HOH A 43 782 782 HOH HOH . G 6 HOH A 44 783 783 HOH HOH . G 6 HOH A 45 784 784 HOH HOH . G 6 HOH A 46 785 785 HOH HOH . G 6 HOH A 47 786 786 HOH HOH . G 6 HOH A 48 787 787 HOH HOH . G 6 HOH A 49 788 788 HOH HOH . G 6 HOH A 50 789 789 HOH HOH . G 6 HOH A 51 790 790 HOH HOH . G 6 HOH A 52 791 791 HOH HOH . G 6 HOH A 53 792 792 HOH HOH . G 6 HOH A 54 793 793 HOH HOH . G 6 HOH A 55 794 794 HOH HOH . G 6 HOH A 56 795 795 HOH HOH . G 6 HOH A 57 796 796 HOH HOH . G 6 HOH A 58 797 797 HOH HOH . G 6 HOH A 59 798 798 HOH HOH . G 6 HOH A 60 799 799 HOH HOH . G 6 HOH A 61 800 800 HOH HOH . G 6 HOH A 62 801 801 HOH HOH . G 6 HOH A 63 802 802 HOH HOH . G 6 HOH A 64 803 803 HOH HOH . G 6 HOH A 65 804 804 HOH HOH . G 6 HOH A 66 805 805 HOH HOH . G 6 HOH A 67 806 806 HOH HOH . G 6 HOH A 68 807 807 HOH HOH . G 6 HOH A 69 808 808 HOH HOH . G 6 HOH A 70 809 809 HOH HOH . G 6 HOH A 71 810 810 HOH HOH . G 6 HOH A 72 811 811 HOH HOH . G 6 HOH A 73 812 812 HOH HOH . G 6 HOH A 74 813 813 HOH HOH . G 6 HOH A 75 814 814 HOH HOH . G 6 HOH A 76 815 815 HOH HOH . G 6 HOH A 77 816 816 HOH HOH . G 6 HOH A 78 817 817 HOH HOH . G 6 HOH A 79 818 818 HOH HOH . G 6 HOH A 80 819 819 HOH HOH . G 6 HOH A 81 820 820 HOH HOH . G 6 HOH A 82 821 821 HOH HOH . G 6 HOH A 83 822 822 HOH HOH . G 6 HOH A 84 823 823 HOH HOH . G 6 HOH A 85 824 824 HOH HOH . G 6 HOH A 86 825 825 HOH HOH . G 6 HOH A 87 826 826 HOH HOH . G 6 HOH A 88 827 827 HOH HOH . G 6 HOH A 89 828 828 HOH HOH . G 6 HOH A 90 829 829 HOH HOH . G 6 HOH A 91 830 830 HOH HOH . G 6 HOH A 92 831 831 HOH HOH . G 6 HOH A 93 832 832 HOH HOH . G 6 HOH A 94 833 833 HOH HOH . G 6 HOH A 95 834 834 HOH HOH . G 6 HOH A 96 835 835 HOH HOH . G 6 HOH A 97 836 836 HOH HOH . G 6 HOH A 98 837 837 HOH HOH . G 6 HOH A 99 838 838 HOH HOH . G 6 HOH A 100 839 839 HOH HOH . G 6 HOH A 101 840 840 HOH HOH . G 6 HOH A 102 841 841 HOH HOH . G 6 HOH A 103 842 842 HOH HOH . G 6 HOH A 104 843 843 HOH HOH . G 6 HOH A 105 844 844 HOH HOH . G 6 HOH A 106 845 845 HOH HOH . G 6 HOH A 107 846 846 HOH HOH . G 6 HOH A 108 847 847 HOH HOH . G 6 HOH A 109 848 848 HOH HOH . G 6 HOH A 110 849 849 HOH HOH . G 6 HOH A 111 850 850 HOH HOH . G 6 HOH A 112 851 851 HOH HOH . G 6 HOH A 113 852 852 HOH HOH . G 6 HOH A 114 853 853 HOH HOH . G 6 HOH A 115 854 854 HOH HOH . G 6 HOH A 116 855 855 HOH HOH . G 6 HOH A 117 856 856 HOH HOH . G 6 HOH A 118 857 857 HOH HOH . G 6 HOH A 119 858 858 HOH HOH . G 6 HOH A 120 859 859 HOH HOH . G 6 HOH A 121 860 860 HOH HOH . G 6 HOH A 122 861 861 HOH HOH . G 6 HOH A 123 862 862 HOH HOH . G 6 HOH A 124 863 863 HOH HOH . G 6 HOH A 125 864 864 HOH HOH . G 6 HOH A 126 865 865 HOH HOH . G 6 HOH A 127 866 866 HOH HOH . G 6 HOH A 128 867 867 HOH HOH . G 6 HOH A 129 868 868 HOH HOH . G 6 HOH A 130 869 869 HOH HOH . G 6 HOH A 131 870 870 HOH HOH . G 6 HOH A 132 871 871 HOH HOH . G 6 HOH A 133 872 872 HOH HOH . G 6 HOH A 134 873 873 HOH HOH . G 6 HOH A 135 874 874 HOH HOH . G 6 HOH A 136 875 875 HOH HOH . G 6 HOH A 137 876 876 HOH HOH . G 6 HOH A 138 877 877 HOH HOH . G 6 HOH A 139 878 878 HOH HOH . G 6 HOH A 140 879 879 HOH HOH . G 6 HOH A 141 880 880 HOH HOH . G 6 HOH A 142 881 881 HOH HOH . G 6 HOH A 143 882 882 HOH HOH . G 6 HOH A 144 883 883 HOH HOH . H 6 HOH T 1 17 17 HOH HOH . H 6 HOH T 2 18 18 HOH HOH . H 6 HOH T 3 19 19 HOH HOH . H 6 HOH T 4 20 20 HOH HOH . H 6 HOH T 5 21 21 HOH HOH . H 6 HOH T 6 22 22 HOH HOH . H 6 HOH T 7 23 23 HOH HOH . H 6 HOH T 8 24 24 HOH HOH . I 6 HOH P 1 31 31 HOH HOH . I 6 HOH P 2 83 83 HOH HOH . I 6 HOH P 3 98 98 HOH HOH . I 6 HOH P 4 133 133 HOH HOH . I 6 HOH P 5 144 144 HOH HOH . I 6 HOH P 6 155 155 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x 20.98 _atom_site.Cartn_y 34.197 _atom_site.Cartn_z 1.285 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 298 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #