data_3BJZ # _model_server_result.job_id x6qqmkmcBY6hVanfjOlzjg _model_server_result.datetime_utc '2024-11-14 19:33:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bjz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":198}' # _entry.id 3BJZ # _exptl.entry_id 3BJZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BJZ _cell.length_a 123.842 _cell.length_b 131.609 _cell.length_c 48.774 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BJZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 4 A ASP 2 1_555 A N MSE 5 A MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MSE 5 A MSE 3 1_555 A N GLN 6 A GLN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C VAL 37 A VAL 35 1_555 A N MSE 38 A MSE 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MSE 38 A MSE 36 1_555 A N VAL 39 A VAL 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C GLU 140 A GLU 138 1_555 A N MSE 141 A MSE 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 141 A MSE 139 1_555 A N LEU 142 A LEU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 A C GLY 153 A GLY 151 1_555 A N MSE 154 A MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 A C MSE 154 A MSE 152 1_555 A N ALA 155 A ALA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 B C HIS 2 B HIS 0 1_555 B N MSE 3 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale10 B C MSE 3 B MSE 1 1_555 B N ASP 4 B ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 B C ASP 4 B ASP 2 1_555 B N MSE 5 B MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 B C MSE 5 B MSE 3 1_555 B N GLN 6 B GLN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale13 B C VAL 37 B VAL 35 1_555 B N MSE 38 B MSE 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale14 B C MSE 38 B MSE 36 1_555 B N VAL 39 B VAL 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale15 B C GLU 140 B GLU 138 1_555 B N MSE 141 B MSE 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale16 B C MSE 141 B MSE 139 1_555 B N LEU 142 B LEU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale17 B C GLY 153 B GLY 151 1_555 B N MSE 154 B MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale18 B C MSE 154 B MSE 152 1_555 B N ALA 155 B ALA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale19 C C MSE 3 C MSE 1 1_555 C N ASP 4 C ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale20 C C ASP 4 C ASP 2 1_555 C N MSE 5 C MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale21 C C MSE 5 C MSE 3 1_555 C N GLN 6 C GLN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale22 C C VAL 37 C VAL 35 1_555 C N MSE 38 C MSE 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale23 C C MSE 38 C MSE 36 1_555 C N VAL 39 C VAL 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale24 C C GLU 140 C GLU 138 1_555 C N MSE 141 C MSE 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale25 C C MSE 141 C MSE 139 1_555 C N LEU 142 C LEU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale26 C C GLY 153 C GLY 151 1_555 C N MSE 154 C MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale27 C C MSE 154 C MSE 152 1_555 C N ALA 155 C ALA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale28 D C ASP 4 D ASP 2 1_555 D N MSE 5 D MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale29 D C MSE 5 D MSE 3 1_555 D N GLN 6 D GLN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale30 D C VAL 37 D VAL 35 1_555 D N MSE 38 D MSE 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale31 D C MSE 38 D MSE 36 1_555 D N VAL 39 D VAL 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale32 D C GLU 140 D GLU 138 1_555 D N MSE 141 D MSE 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale33 D C MSE 141 D MSE 139 1_555 D N LEU 142 D LEU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale34 D C GLY 153 D GLY 151 1_555 D N MSE 154 D MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale35 D C MSE 154 D MSE 152 1_555 D N ALA 155 D ALA 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3BJZ _atom_sites.fract_transf_matrix[1][1] 0.008075 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007598 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020503 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 198 1 SO4 SO4 . F 2 SO4 B 1 198 2 SO4 SO4 . G 2 SO4 C 1 198 3 SO4 SO4 . H 2 SO4 D 1 198 4 SO4 SO4 . I 3 CL D 1 199 5 CL CL . J 4 HOH A 1 199 9 HOH HOH . J 4 HOH A 2 200 14 HOH HOH . J 4 HOH A 3 201 15 HOH HOH . J 4 HOH A 4 202 23 HOH HOH . J 4 HOH A 5 203 29 HOH HOH . J 4 HOH A 6 204 32 HOH HOH . J 4 HOH A 7 205 34 HOH HOH . J 4 HOH A 8 206 35 HOH HOH . J 4 HOH A 9 207 41 HOH HOH . J 4 HOH A 10 208 45 HOH HOH . J 4 HOH A 11 209 49 HOH HOH . J 4 HOH A 12 210 50 HOH HOH . J 4 HOH A 13 211 53 HOH HOH . J 4 HOH A 14 212 57 HOH HOH . J 4 HOH A 15 213 58 HOH HOH . J 4 HOH A 16 214 61 HOH HOH . J 4 HOH A 17 215 66 HOH HOH . J 4 HOH A 18 216 67 HOH HOH . J 4 HOH A 19 217 79 HOH HOH . J 4 HOH A 20 218 80 HOH HOH . J 4 HOH A 21 219 90 HOH HOH . J 4 HOH A 22 220 92 HOH HOH . J 4 HOH A 23 221 98 HOH HOH . J 4 HOH A 24 222 111 HOH HOH . J 4 HOH A 25 223 112 HOH HOH . J 4 HOH A 26 224 116 HOH HOH . J 4 HOH A 27 225 129 HOH HOH . J 4 HOH A 28 226 136 HOH HOH . J 4 HOH A 29 227 142 HOH HOH . J 4 HOH A 30 228 144 HOH HOH . J 4 HOH A 31 229 148 HOH HOH . J 4 HOH A 32 230 42 HOH HOH . K 4 HOH B 1 199 8 HOH HOH . K 4 HOH B 2 200 10 HOH HOH . K 4 HOH B 3 201 12 HOH HOH . K 4 HOH B 4 202 18 HOH HOH . K 4 HOH B 5 203 20 HOH HOH . K 4 HOH B 6 204 21 HOH HOH . K 4 HOH B 7 205 24 HOH HOH . K 4 HOH B 8 206 25 HOH HOH . K 4 HOH B 9 207 28 HOH HOH . K 4 HOH B 10 208 30 HOH HOH . K 4 HOH B 11 209 38 HOH HOH . K 4 HOH B 12 210 43 HOH HOH . K 4 HOH B 13 211 44 HOH HOH . K 4 HOH B 14 212 46 HOH HOH . K 4 HOH B 15 213 47 HOH HOH . K 4 HOH B 16 214 48 HOH HOH . K 4 HOH B 17 215 52 HOH HOH . K 4 HOH B 18 216 54 HOH HOH . K 4 HOH B 19 217 59 HOH HOH . K 4 HOH B 20 218 60 HOH HOH . K 4 HOH B 21 219 63 HOH HOH . K 4 HOH B 22 220 64 HOH HOH . K 4 HOH B 23 221 72 HOH HOH . K 4 HOH B 24 222 78 HOH HOH . K 4 HOH B 25 223 84 HOH HOH . K 4 HOH B 26 224 94 HOH HOH . K 4 HOH B 27 225 97 HOH HOH . K 4 HOH B 28 226 102 HOH HOH . K 4 HOH B 29 227 104 HOH HOH . K 4 HOH B 30 228 105 HOH HOH . K 4 HOH B 31 229 106 HOH HOH . K 4 HOH B 32 230 110 HOH HOH . K 4 HOH B 33 231 117 HOH HOH . K 4 HOH B 34 232 119 HOH HOH . K 4 HOH B 35 233 121 HOH HOH . K 4 HOH B 36 234 124 HOH HOH . K 4 HOH B 37 235 125 HOH HOH . K 4 HOH B 38 236 131 HOH HOH . K 4 HOH B 39 237 138 HOH HOH . K 4 HOH B 40 238 140 HOH HOH . K 4 HOH B 41 239 145 HOH HOH . K 4 HOH B 42 240 149 HOH HOH . K 4 HOH B 43 241 150 HOH HOH . K 4 HOH B 44 242 151 HOH HOH . K 4 HOH B 45 243 153 HOH HOH . L 4 HOH C 1 199 6 HOH HOH . L 4 HOH C 2 200 7 HOH HOH . L 4 HOH C 3 201 11 HOH HOH . L 4 HOH C 4 202 13 HOH HOH . L 4 HOH C 5 203 16 HOH HOH . L 4 HOH C 6 204 17 HOH HOH . L 4 HOH C 7 205 19 HOH HOH . L 4 HOH C 8 206 26 HOH HOH . L 4 HOH C 9 207 27 HOH HOH . L 4 HOH C 10 208 31 HOH HOH . L 4 HOH C 11 209 33 HOH HOH . L 4 HOH C 12 210 36 HOH HOH . L 4 HOH C 13 211 37 HOH HOH . L 4 HOH C 14 212 40 HOH HOH . L 4 HOH C 15 214 51 HOH HOH . L 4 HOH C 16 215 55 HOH HOH . L 4 HOH C 17 216 56 HOH HOH . L 4 HOH C 18 217 62 HOH HOH . L 4 HOH C 19 218 65 HOH HOH . L 4 HOH C 20 219 68 HOH HOH . L 4 HOH C 21 220 69 HOH HOH . L 4 HOH C 22 221 70 HOH HOH . L 4 HOH C 23 222 71 HOH HOH . L 4 HOH C 24 223 73 HOH HOH . L 4 HOH C 25 224 74 HOH HOH . L 4 HOH C 26 225 75 HOH HOH . L 4 HOH C 27 226 76 HOH HOH . L 4 HOH C 28 227 77 HOH HOH . L 4 HOH C 29 228 86 HOH HOH . L 4 HOH C 30 229 87 HOH HOH . L 4 HOH C 31 230 88 HOH HOH . L 4 HOH C 32 231 89 HOH HOH . L 4 HOH C 33 232 95 HOH HOH . L 4 HOH C 34 233 96 HOH HOH . L 4 HOH C 35 234 99 HOH HOH . L 4 HOH C 36 235 100 HOH HOH . L 4 HOH C 37 236 107 HOH HOH . L 4 HOH C 38 237 108 HOH HOH . L 4 HOH C 39 238 109 HOH HOH . L 4 HOH C 40 239 115 HOH HOH . L 4 HOH C 41 240 120 HOH HOH . L 4 HOH C 42 241 122 HOH HOH . L 4 HOH C 43 242 123 HOH HOH . L 4 HOH C 44 243 126 HOH HOH . L 4 HOH C 45 244 127 HOH HOH . L 4 HOH C 46 245 133 HOH HOH . L 4 HOH C 47 246 134 HOH HOH . L 4 HOH C 48 247 135 HOH HOH . L 4 HOH C 49 248 139 HOH HOH . L 4 HOH C 50 249 146 HOH HOH . M 4 HOH D 1 200 22 HOH HOH . M 4 HOH D 2 201 39 HOH HOH . M 4 HOH D 3 202 81 HOH HOH . M 4 HOH D 4 203 82 HOH HOH . M 4 HOH D 5 204 83 HOH HOH . M 4 HOH D 6 205 85 HOH HOH . M 4 HOH D 7 206 91 HOH HOH . M 4 HOH D 8 207 93 HOH HOH . M 4 HOH D 9 208 101 HOH HOH . M 4 HOH D 10 209 103 HOH HOH . M 4 HOH D 11 210 113 HOH HOH . M 4 HOH D 12 211 114 HOH HOH . M 4 HOH D 13 212 118 HOH HOH . M 4 HOH D 14 213 128 HOH HOH . M 4 HOH D 15 214 130 HOH HOH . M 4 HOH D 16 215 132 HOH HOH . M 4 HOH D 17 216 137 HOH HOH . M 4 HOH D 18 217 141 HOH HOH . M 4 HOH D 19 218 143 HOH HOH . M 4 HOH D 20 219 147 HOH HOH . M 4 HOH D 21 220 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 2 93.742 41.454 18.296 1 87.32 ? S SO4 198 C 1 HETATM 2 O O1 SO4 . . . G 2 94.997 40.709 18.394 1 86.98 ? O1 SO4 198 C 1 HETATM 3 O O2 SO4 . . . G 2 93.365 41.645 16.895 1 85.18 ? O2 SO4 198 C 1 HETATM 4 O O3 SO4 . . . G 2 92.707 40.7 18.99 1 87.11 ? O3 SO4 198 C 1 HETATM 5 O O4 SO4 . . . G 2 93.881 42.756 18.95 1 87.78 ? O4 SO4 198 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #