data_3BK0 # _model_server_result.job_id y7ECdcCP0dzFoRIYrb2FcA _model_server_result.datetime_utc '2024-11-04 20:18:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bk0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2000}' # _entry.id 3BK0 # _exptl.entry_id 3BK0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.81 _cell.angle_gamma 90 _cell.entry_id 3BK0 _cell.length_a 69.552 _cell.length_b 61.554 _cell.length_c 70.989 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BK0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 165 n n C1 C2 GOL sing 166 n n C1 H11 GOL sing 167 n n C1 H12 GOL sing 168 n n O1 HO1 GOL sing 169 n n C2 O2 GOL sing 170 n n C2 C3 GOL sing 171 n n C2 H2 GOL sing 172 n n O2 HO2 GOL sing 173 n n C3 O3 GOL sing 174 n n C3 H31 GOL sing 175 n n C3 H32 GOL sing 176 n n O3 HO3 GOL sing 177 n n # _atom_sites.entry_id 3BK0 _atom_sites.fract_transf_matrix[1][1] 0.014378 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005752 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015172 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 3000 3000 SO4 SO4 . D 2 SO4 A 1 3001 3001 SO4 SO4 . E 3 CNU A 1 1000 1000 CNU CNU . F 4 GOL A 1 2000 2000 GOL GOL . G 4 GOL A 1 2001 2001 GOL GOL . H 3 CNU B 1 1001 1001 CNU CNU . I 5 HOH A 1 3002 5 HOH HOH . I 5 HOH A 2 3003 6 HOH HOH . I 5 HOH A 3 3004 8 HOH HOH . I 5 HOH A 4 3005 10 HOH HOH . I 5 HOH A 5 3006 12 HOH HOH . I 5 HOH A 6 3007 13 HOH HOH . I 5 HOH A 7 3008 18 HOH HOH . I 5 HOH A 8 3009 19 HOH HOH . I 5 HOH A 9 3010 20 HOH HOH . I 5 HOH A 10 3011 21 HOH HOH . I 5 HOH A 11 3012 24 HOH HOH . I 5 HOH A 12 3013 25 HOH HOH . I 5 HOH A 13 3014 27 HOH HOH . I 5 HOH A 14 3015 28 HOH HOH . I 5 HOH A 15 3016 29 HOH HOH . I 5 HOH A 16 3017 30 HOH HOH . I 5 HOH A 17 3018 33 HOH HOH . I 5 HOH A 18 3019 34 HOH HOH . I 5 HOH A 19 3020 36 HOH HOH . I 5 HOH A 20 3021 38 HOH HOH . I 5 HOH A 21 3022 39 HOH HOH . I 5 HOH A 22 3023 40 HOH HOH . I 5 HOH A 23 3024 41 HOH HOH . I 5 HOH A 24 3025 42 HOH HOH . I 5 HOH A 25 3026 43 HOH HOH . I 5 HOH A 26 3027 45 HOH HOH . I 5 HOH A 27 3028 46 HOH HOH . I 5 HOH A 28 3029 48 HOH HOH . I 5 HOH A 29 3030 49 HOH HOH . I 5 HOH A 30 3031 50 HOH HOH . I 5 HOH A 31 3032 51 HOH HOH . I 5 HOH A 32 3033 52 HOH HOH . I 5 HOH A 33 3034 53 HOH HOH . I 5 HOH A 34 3035 54 HOH HOH . I 5 HOH A 35 3036 55 HOH HOH . I 5 HOH A 36 3037 57 HOH HOH . I 5 HOH A 37 3038 58 HOH HOH . I 5 HOH A 38 3039 61 HOH HOH . I 5 HOH A 39 3040 64 HOH HOH . I 5 HOH A 40 3041 65 HOH HOH . I 5 HOH A 41 3042 67 HOH HOH . I 5 HOH A 42 3043 68 HOH HOH . I 5 HOH A 43 3044 71 HOH HOH . I 5 HOH A 44 3045 72 HOH HOH . I 5 HOH A 45 3046 74 HOH HOH . I 5 HOH A 46 3047 76 HOH HOH . I 5 HOH A 47 3048 79 HOH HOH . I 5 HOH A 48 3049 80 HOH HOH . I 5 HOH A 49 3050 81 HOH HOH . I 5 HOH A 50 3051 85 HOH HOH . I 5 HOH A 51 3052 86 HOH HOH . I 5 HOH A 52 3053 87 HOH HOH . I 5 HOH A 53 3054 88 HOH HOH . I 5 HOH A 54 3055 90 HOH HOH . I 5 HOH A 55 3056 91 HOH HOH . I 5 HOH A 56 3057 93 HOH HOH . I 5 HOH A 57 3058 94 HOH HOH . I 5 HOH A 58 3059 95 HOH HOH . I 5 HOH A 59 3060 96 HOH HOH . I 5 HOH A 60 3061 98 HOH HOH . I 5 HOH A 61 3062 100 HOH HOH . I 5 HOH A 62 3063 101 HOH HOH . I 5 HOH A 63 3064 104 HOH HOH . I 5 HOH A 64 3065 105 HOH HOH . I 5 HOH A 65 3066 106 HOH HOH . I 5 HOH A 66 3067 107 HOH HOH . I 5 HOH A 67 3068 109 HOH HOH . I 5 HOH A 68 3069 112 HOH HOH . I 5 HOH A 69 3070 113 HOH HOH . I 5 HOH A 70 3071 114 HOH HOH . I 5 HOH A 71 3072 120 HOH HOH . I 5 HOH A 72 3073 121 HOH HOH . I 5 HOH A 73 3074 125 HOH HOH . I 5 HOH A 74 3075 126 HOH HOH . I 5 HOH A 75 3076 128 HOH HOH . I 5 HOH A 76 3077 129 HOH HOH . I 5 HOH A 77 3078 130 HOH HOH . I 5 HOH A 78 3079 131 HOH HOH . I 5 HOH A 79 3080 132 HOH HOH . I 5 HOH A 80 3081 134 HOH HOH . I 5 HOH A 81 3082 137 HOH HOH . I 5 HOH A 82 3083 139 HOH HOH . I 5 HOH A 83 3084 141 HOH HOH . I 5 HOH A 84 3085 147 HOH HOH . I 5 HOH A 85 3086 148 HOH HOH . I 5 HOH A 86 3087 149 HOH HOH . I 5 HOH A 87 3088 150 HOH HOH . I 5 HOH A 88 3089 151 HOH HOH . I 5 HOH A 89 3090 152 HOH HOH . I 5 HOH A 90 3091 154 HOH HOH . I 5 HOH A 91 3092 156 HOH HOH . I 5 HOH A 92 3093 158 HOH HOH . I 5 HOH A 93 3094 160 HOH HOH . I 5 HOH A 94 3095 161 HOH HOH . I 5 HOH A 95 3096 162 HOH HOH . I 5 HOH A 96 3097 164 HOH HOH . I 5 HOH A 97 3098 169 HOH HOH . I 5 HOH A 98 3099 171 HOH HOH . I 5 HOH A 99 3100 172 HOH HOH . I 5 HOH A 100 3101 173 HOH HOH . I 5 HOH A 101 3102 175 HOH HOH . I 5 HOH A 102 3103 177 HOH HOH . I 5 HOH A 103 3104 178 HOH HOH . I 5 HOH A 104 3105 182 HOH HOH . I 5 HOH A 105 3106 183 HOH HOH . I 5 HOH A 106 3107 185 HOH HOH . I 5 HOH A 107 3108 187 HOH HOH . I 5 HOH A 108 3109 190 HOH HOH . I 5 HOH A 109 3110 191 HOH HOH . I 5 HOH A 110 3111 197 HOH HOH . I 5 HOH A 111 3112 198 HOH HOH . I 5 HOH A 112 3113 199 HOH HOH . I 5 HOH A 113 3114 200 HOH HOH . I 5 HOH A 114 3115 201 HOH HOH . I 5 HOH A 115 3116 203 HOH HOH . I 5 HOH A 116 3117 205 HOH HOH . I 5 HOH A 117 3118 206 HOH HOH . I 5 HOH A 118 3119 208 HOH HOH . I 5 HOH A 119 3120 209 HOH HOH . I 5 HOH A 120 3121 210 HOH HOH . I 5 HOH A 121 3122 211 HOH HOH . I 5 HOH A 122 3123 212 HOH HOH . I 5 HOH A 123 3124 213 HOH HOH . I 5 HOH A 124 3125 214 HOH HOH . I 5 HOH A 125 3126 218 HOH HOH . I 5 HOH A 126 3127 222 HOH HOH . I 5 HOH A 127 3128 223 HOH HOH . I 5 HOH A 128 3129 226 HOH HOH . I 5 HOH A 129 3130 233 HOH HOH . I 5 HOH A 130 3131 235 HOH HOH . I 5 HOH A 131 3132 239 HOH HOH . I 5 HOH A 132 3133 240 HOH HOH . I 5 HOH A 133 3134 244 HOH HOH . I 5 HOH A 134 3135 250 HOH HOH . I 5 HOH A 135 3136 251 HOH HOH . I 5 HOH A 136 3137 253 HOH HOH . I 5 HOH A 137 3138 255 HOH HOH . J 5 HOH B 1 1002 1 HOH HOH . J 5 HOH B 2 1003 2 HOH HOH . J 5 HOH B 3 1004 3 HOH HOH . J 5 HOH B 4 1005 4 HOH HOH . J 5 HOH B 5 1006 7 HOH HOH . J 5 HOH B 6 1007 9 HOH HOH . J 5 HOH B 7 1008 11 HOH HOH . J 5 HOH B 8 1009 14 HOH HOH . J 5 HOH B 9 1010 15 HOH HOH . J 5 HOH B 10 1011 16 HOH HOH . J 5 HOH B 11 1012 17 HOH HOH . J 5 HOH B 12 1013 22 HOH HOH . J 5 HOH B 13 1014 23 HOH HOH . J 5 HOH B 14 1015 26 HOH HOH . J 5 HOH B 15 1016 31 HOH HOH . J 5 HOH B 16 1017 32 HOH HOH . J 5 HOH B 17 1018 35 HOH HOH . J 5 HOH B 18 1019 37 HOH HOH . J 5 HOH B 19 1020 44 HOH HOH . J 5 HOH B 20 1021 47 HOH HOH . J 5 HOH B 21 1022 56 HOH HOH . J 5 HOH B 22 1023 59 HOH HOH . J 5 HOH B 23 1024 60 HOH HOH . J 5 HOH B 24 1025 62 HOH HOH . J 5 HOH B 25 1026 63 HOH HOH . J 5 HOH B 26 1027 66 HOH HOH . J 5 HOH B 27 1028 69 HOH HOH . J 5 HOH B 28 1029 70 HOH HOH . J 5 HOH B 29 1030 73 HOH HOH . J 5 HOH B 30 1031 75 HOH HOH . J 5 HOH B 31 1032 77 HOH HOH . J 5 HOH B 32 1033 78 HOH HOH . J 5 HOH B 33 1034 82 HOH HOH . J 5 HOH B 34 1035 83 HOH HOH . J 5 HOH B 35 1036 84 HOH HOH . J 5 HOH B 36 1037 89 HOH HOH . J 5 HOH B 37 1038 92 HOH HOH . J 5 HOH B 38 1039 97 HOH HOH . J 5 HOH B 39 1040 99 HOH HOH . J 5 HOH B 40 1041 102 HOH HOH . J 5 HOH B 41 1042 103 HOH HOH . J 5 HOH B 42 1043 108 HOH HOH . J 5 HOH B 43 1044 110 HOH HOH . J 5 HOH B 44 1045 111 HOH HOH . J 5 HOH B 45 1046 115 HOH HOH . J 5 HOH B 46 1047 116 HOH HOH . J 5 HOH B 47 1048 117 HOH HOH . J 5 HOH B 48 1049 118 HOH HOH . J 5 HOH B 49 1050 119 HOH HOH . J 5 HOH B 50 1051 122 HOH HOH . J 5 HOH B 51 1052 123 HOH HOH . J 5 HOH B 52 1053 124 HOH HOH . J 5 HOH B 53 1054 127 HOH HOH . J 5 HOH B 54 1055 133 HOH HOH . J 5 HOH B 55 1056 135 HOH HOH . J 5 HOH B 56 1057 136 HOH HOH . J 5 HOH B 57 1058 138 HOH HOH . J 5 HOH B 58 1059 140 HOH HOH . J 5 HOH B 59 1060 142 HOH HOH . J 5 HOH B 60 1061 143 HOH HOH . J 5 HOH B 61 1062 144 HOH HOH . J 5 HOH B 62 1063 145 HOH HOH . J 5 HOH B 63 1064 146 HOH HOH . J 5 HOH B 64 1065 153 HOH HOH . J 5 HOH B 65 1066 155 HOH HOH . J 5 HOH B 66 1067 157 HOH HOH . J 5 HOH B 67 1068 159 HOH HOH . J 5 HOH B 68 1069 163 HOH HOH . J 5 HOH B 69 1070 165 HOH HOH . J 5 HOH B 70 1071 166 HOH HOH . J 5 HOH B 71 1072 167 HOH HOH . J 5 HOH B 72 1073 168 HOH HOH . J 5 HOH B 73 1074 170 HOH HOH . J 5 HOH B 74 1075 174 HOH HOH . J 5 HOH B 75 1076 176 HOH HOH . J 5 HOH B 76 1077 179 HOH HOH . J 5 HOH B 77 1078 180 HOH HOH . J 5 HOH B 78 1079 181 HOH HOH . J 5 HOH B 79 1080 184 HOH HOH . J 5 HOH B 80 1081 186 HOH HOH . J 5 HOH B 81 1082 188 HOH HOH . J 5 HOH B 82 1083 189 HOH HOH . J 5 HOH B 83 1084 192 HOH HOH . J 5 HOH B 84 1085 193 HOH HOH . J 5 HOH B 85 1086 194 HOH HOH . J 5 HOH B 86 1087 195 HOH HOH . J 5 HOH B 87 1088 196 HOH HOH . J 5 HOH B 88 1089 202 HOH HOH . J 5 HOH B 89 1090 204 HOH HOH . J 5 HOH B 90 1091 207 HOH HOH . J 5 HOH B 91 1092 215 HOH HOH . J 5 HOH B 92 1093 216 HOH HOH . J 5 HOH B 93 1094 217 HOH HOH . J 5 HOH B 94 1095 219 HOH HOH . J 5 HOH B 95 1096 220 HOH HOH . J 5 HOH B 96 1097 221 HOH HOH . J 5 HOH B 97 1098 224 HOH HOH . J 5 HOH B 98 1099 225 HOH HOH . J 5 HOH B 99 1100 227 HOH HOH . J 5 HOH B 100 1101 228 HOH HOH . J 5 HOH B 101 1102 229 HOH HOH . J 5 HOH B 102 1103 230 HOH HOH . J 5 HOH B 103 1104 231 HOH HOH . J 5 HOH B 104 1105 232 HOH HOH . J 5 HOH B 105 1106 234 HOH HOH . J 5 HOH B 106 1107 236 HOH HOH . J 5 HOH B 107 1108 237 HOH HOH . J 5 HOH B 108 1109 238 HOH HOH . J 5 HOH B 109 1110 241 HOH HOH . J 5 HOH B 110 1111 242 HOH HOH . J 5 HOH B 111 1112 243 HOH HOH . J 5 HOH B 112 1113 245 HOH HOH . J 5 HOH B 113 1114 246 HOH HOH . J 5 HOH B 114 1115 247 HOH HOH . J 5 HOH B 115 1116 248 HOH HOH . J 5 HOH B 116 1117 249 HOH HOH . J 5 HOH B 117 1118 252 HOH HOH . J 5 HOH B 118 1119 254 HOH HOH . J 5 HOH B 119 1120 256 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 4 1.522 -7.342 43.528 1 53.83 ? C1 GOL 2000 A 1 HETATM 2 O O1 GOL . . . F 4 0.128 -7.152 43.409 1 48.82 ? O1 GOL 2000 A 1 HETATM 3 C C2 GOL . . . F 4 2.296 -6.714 42.369 1 53.84 ? C2 GOL 2000 A 1 HETATM 4 O O2 GOL . . . F 4 2.34 -5.327 42.591 1 56.71 ? O2 GOL 2000 A 1 HETATM 5 C C3 GOL . . . F 4 3.741 -7.21 42.353 1 54.77 ? C3 GOL 2000 A 1 HETATM 6 O O3 GOL . . . F 4 4.234 -7.184 41.028 1 54.43 ? O3 GOL 2000 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #