data_3BK1 # _model_server_result.job_id 9UGojpH0cJ5mFSe4iKJykA _model_server_result.datetime_utc '2025-01-03 04:36:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bk1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":948}' # _entry.id 3BK1 # _exptl.entry_id 3BK1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BK1 _cell.length_a 97.83 _cell.length_b 117.62 _cell.length_c 230.49 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BK1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 97.83 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 24 A GLY 17 1_555 A N MSE 25 A MSE 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MSE 25 A MSE 18 1_555 A N GLY 26 A GLY 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C GLY 54 A GLY 47 1_555 A N MSE 55 A MSE 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 55 A MSE 48 1_555 A N PRO 56 A PRO 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale5 A C PRO 96 A PRO 89 1_555 A N MSE 97 A MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C MSE 97 A MSE 90 1_555 A N ILE 98 A ILE 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 A C ARG 154 A ARG 147 1_555 A N MSE 155 A MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 A C MSE 155 A MSE 148 1_555 A N THR 156 A THR 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 A C GLU 224 A GLU 217 1_555 A N MSE 225 A MSE 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 A C MSE 225 A MSE 218 1_555 A N GLU 226 A GLU 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale11 A C ALA 269 A ALA 262 1_555 A N MSE 270 A MSE 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 A C MSE 270 A MSE 263 1_555 A N GLU 271 A GLU 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale13 A C SER 274 A SER 267 1_555 A N MSE 275 A MSE 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale14 A C MSE 275 A MSE 268 1_555 A N LEU 276 A LEU 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale15 A C PRO 319 A PRO 312 1_555 A N MSE 320 A MSE 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale16 A C MSE 320 A MSE 313 1_555 A N SER 321 A SER 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale17 A C LYS 333 A LYS 326 1_555 A N MSE 334 A MSE 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 A C MSE 334 A MSE 327 1_555 A N ALA 335 A ALA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale19 A C GLN 411 A GLN 404 1_555 A N MSE 412 A MSE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale20 A C MSE 412 A MSE 405 1_555 A N ASN 413 A ASN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale21 A C SER 420 A SER 413 1_555 A N MSE 421 A MSE 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale22 A C MSE 421 A MSE 414 1_555 A N SER 422 A SER 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale23 A C HIS 475 A HIS 468 1_555 A N MSE 476 A MSE 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale24 A C MSE 476 A MSE 469 1_555 A N ALA 477 A ALA 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale25 A C ARG 514 A ARG 507 1_555 A N MSE 515 A MSE 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale26 A C MSE 515 A MSE 508 1_555 A N ALA 516 A ALA 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 A C PRO 553 A PRO 546 1_555 A N MSE 554 A MSE 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale28 A C MSE 554 A MSE 547 1_555 A N ILE 555 A ILE 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? metalc ? metalc1 A ND1 HIS 84 A HIS 77 1_555 E ZN ZN . A ZN 948 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc2 A NE2 HIS 157 A HIS 150 1_555 E ZN ZN . A ZN 948 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc3 A OD2 ASP 179 A ASP 172 1_555 F ZN ZN . A ZN 949 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc4 A NE2 HIS 405 A HIS 398 1_555 F ZN ZN . A ZN 949 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3BK1 _atom_sites.fract_transf_matrix[1][1] 0.010222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008502 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004339 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 945 945 SO4 SO4 . C 2 SO4 A 1 946 946 SO4 SO4 . D 2 SO4 A 1 947 947 SO4 SO4 . E 3 ZN A 1 948 400 ZN ZN . F 3 ZN A 1 949 401 ZN ZN . G 4 GOL A 1 601 601 GOL GOL . H 4 GOL A 1 602 602 GOL GOL . I 5 HOH A 1 950 1 HOH HOH . I 5 HOH A 2 951 2 HOH HOH . I 5 HOH A 3 952 3 HOH HOH . I 5 HOH A 4 953 4 HOH HOH . I 5 HOH A 5 954 5 HOH HOH . I 5 HOH A 6 955 6 HOH HOH . I 5 HOH A 7 956 7 HOH HOH . I 5 HOH A 8 957 8 HOH HOH . I 5 HOH A 9 958 9 HOH HOH . I 5 HOH A 10 959 10 HOH HOH . I 5 HOH A 11 960 11 HOH HOH . I 5 HOH A 12 961 12 HOH HOH . I 5 HOH A 13 962 13 HOH HOH . I 5 HOH A 14 963 14 HOH HOH . I 5 HOH A 15 964 15 HOH HOH . I 5 HOH A 16 965 16 HOH HOH . I 5 HOH A 17 966 17 HOH HOH . I 5 HOH A 18 967 18 HOH HOH . I 5 HOH A 19 968 19 HOH HOH . I 5 HOH A 20 969 20 HOH HOH . I 5 HOH A 21 970 21 HOH HOH . I 5 HOH A 22 971 22 HOH HOH . I 5 HOH A 23 972 23 HOH HOH . I 5 HOH A 24 973 24 HOH HOH . I 5 HOH A 25 974 25 HOH HOH . I 5 HOH A 26 975 26 HOH HOH . I 5 HOH A 27 976 27 HOH HOH . I 5 HOH A 28 977 28 HOH HOH . I 5 HOH A 29 978 29 HOH HOH . I 5 HOH A 30 979 30 HOH HOH . I 5 HOH A 31 980 31 HOH HOH . I 5 HOH A 32 981 32 HOH HOH . I 5 HOH A 33 982 33 HOH HOH . I 5 HOH A 34 983 34 HOH HOH . I 5 HOH A 35 984 35 HOH HOH . I 5 HOH A 36 985 36 HOH HOH . I 5 HOH A 37 986 37 HOH HOH . I 5 HOH A 38 987 38 HOH HOH . I 5 HOH A 39 988 39 HOH HOH . I 5 HOH A 40 989 40 HOH HOH . I 5 HOH A 41 990 41 HOH HOH . I 5 HOH A 42 991 42 HOH HOH . I 5 HOH A 43 992 43 HOH HOH . I 5 HOH A 44 993 44 HOH HOH . I 5 HOH A 45 994 45 HOH HOH . I 5 HOH A 46 995 46 HOH HOH . I 5 HOH A 47 996 47 HOH HOH . I 5 HOH A 48 997 48 HOH HOH . I 5 HOH A 49 998 49 HOH HOH . I 5 HOH A 50 999 50 HOH HOH . I 5 HOH A 51 1000 51 HOH HOH . I 5 HOH A 52 1001 52 HOH HOH . I 5 HOH A 53 1002 53 HOH HOH . I 5 HOH A 54 1003 54 HOH HOH . I 5 HOH A 55 1004 55 HOH HOH . I 5 HOH A 56 1005 56 HOH HOH . I 5 HOH A 57 1006 57 HOH HOH . I 5 HOH A 58 1007 58 HOH HOH . I 5 HOH A 59 1008 59 HOH HOH . I 5 HOH A 60 1009 60 HOH HOH . I 5 HOH A 61 1010 61 HOH HOH . I 5 HOH A 62 1011 62 HOH HOH . I 5 HOH A 63 1012 63 HOH HOH . I 5 HOH A 64 1013 64 HOH HOH . I 5 HOH A 65 1014 65 HOH HOH . I 5 HOH A 66 1015 66 HOH HOH . I 5 HOH A 67 1016 67 HOH HOH . I 5 HOH A 68 1017 68 HOH HOH . I 5 HOH A 69 1018 69 HOH HOH . I 5 HOH A 70 1019 70 HOH HOH . I 5 HOH A 71 1020 71 HOH HOH . I 5 HOH A 72 1021 72 HOH HOH . I 5 HOH A 73 1022 73 HOH HOH . I 5 HOH A 74 1023 74 HOH HOH . I 5 HOH A 75 1024 75 HOH HOH . I 5 HOH A 76 1025 76 HOH HOH . I 5 HOH A 77 1026 77 HOH HOH . I 5 HOH A 78 1027 78 HOH HOH . I 5 HOH A 79 1028 79 HOH HOH . I 5 HOH A 80 1029 80 HOH HOH . I 5 HOH A 81 1030 81 HOH HOH . I 5 HOH A 82 1031 82 HOH HOH . I 5 HOH A 83 1032 83 HOH HOH . I 5 HOH A 84 1033 84 HOH HOH . I 5 HOH A 85 1034 85 HOH HOH . I 5 HOH A 86 1035 86 HOH HOH . I 5 HOH A 87 1036 87 HOH HOH . I 5 HOH A 88 1037 88 HOH HOH . I 5 HOH A 89 1038 89 HOH HOH . I 5 HOH A 90 1039 90 HOH HOH . I 5 HOH A 91 1040 91 HOH HOH . I 5 HOH A 92 1041 92 HOH HOH . I 5 HOH A 93 1042 93 HOH HOH . I 5 HOH A 94 1043 94 HOH HOH . I 5 HOH A 95 1044 95 HOH HOH . I 5 HOH A 96 1045 96 HOH HOH . I 5 HOH A 97 1046 97 HOH HOH . I 5 HOH A 98 1047 98 HOH HOH . I 5 HOH A 99 1048 99 HOH HOH . I 5 HOH A 100 1049 100 HOH HOH . I 5 HOH A 101 1050 101 HOH HOH . I 5 HOH A 102 1051 102 HOH HOH . I 5 HOH A 103 1052 103 HOH HOH . I 5 HOH A 104 1053 104 HOH HOH . I 5 HOH A 105 1054 105 HOH HOH . I 5 HOH A 106 1055 106 HOH HOH . I 5 HOH A 107 1056 107 HOH HOH . I 5 HOH A 108 1057 108 HOH HOH . I 5 HOH A 109 1058 109 HOH HOH . I 5 HOH A 110 1059 110 HOH HOH . I 5 HOH A 111 1060 111 HOH HOH . I 5 HOH A 112 1061 112 HOH HOH . I 5 HOH A 113 1062 113 HOH HOH . I 5 HOH A 114 1063 114 HOH HOH . I 5 HOH A 115 1064 115 HOH HOH . I 5 HOH A 116 1065 116 HOH HOH . I 5 HOH A 117 1066 117 HOH HOH . I 5 HOH A 118 1067 118 HOH HOH . I 5 HOH A 119 1068 119 HOH HOH . I 5 HOH A 120 1069 120 HOH HOH . I 5 HOH A 121 1070 121 HOH HOH . I 5 HOH A 122 1071 122 HOH HOH . I 5 HOH A 123 1072 123 HOH HOH . I 5 HOH A 124 1073 124 HOH HOH . I 5 HOH A 125 1074 125 HOH HOH . I 5 HOH A 126 1075 126 HOH HOH . I 5 HOH A 127 1076 127 HOH HOH . I 5 HOH A 128 1077 128 HOH HOH . I 5 HOH A 129 1078 129 HOH HOH . I 5 HOH A 130 1079 130 HOH HOH . I 5 HOH A 131 1080 131 HOH HOH . I 5 HOH A 132 1081 132 HOH HOH . I 5 HOH A 133 1082 133 HOH HOH . I 5 HOH A 134 1083 134 HOH HOH . I 5 HOH A 135 1084 135 HOH HOH . I 5 HOH A 136 1085 136 HOH HOH . I 5 HOH A 137 1086 137 HOH HOH . I 5 HOH A 138 1087 138 HOH HOH . I 5 HOH A 139 1088 139 HOH HOH . I 5 HOH A 140 1089 140 HOH HOH . I 5 HOH A 141 1090 141 HOH HOH . I 5 HOH A 142 1091 142 HOH HOH . I 5 HOH A 143 1092 143 HOH HOH . I 5 HOH A 144 1093 144 HOH HOH . I 5 HOH A 145 1094 145 HOH HOH . I 5 HOH A 146 1095 146 HOH HOH . I 5 HOH A 147 1096 147 HOH HOH . I 5 HOH A 148 1097 148 HOH HOH . I 5 HOH A 149 1098 149 HOH HOH . I 5 HOH A 150 1099 150 HOH HOH . I 5 HOH A 151 1100 151 HOH HOH . I 5 HOH A 152 1101 152 HOH HOH . I 5 HOH A 153 1102 153 HOH HOH . I 5 HOH A 154 1103 154 HOH HOH . I 5 HOH A 155 1104 155 HOH HOH . I 5 HOH A 156 1105 156 HOH HOH . I 5 HOH A 157 1106 157 HOH HOH . I 5 HOH A 158 1107 158 HOH HOH . I 5 HOH A 159 1108 159 HOH HOH . I 5 HOH A 160 1109 160 HOH HOH . I 5 HOH A 161 1110 161 HOH HOH . I 5 HOH A 162 1111 162 HOH HOH . I 5 HOH A 163 1112 163 HOH HOH . I 5 HOH A 164 1113 164 HOH HOH . I 5 HOH A 165 1114 165 HOH HOH . I 5 HOH A 166 1115 166 HOH HOH . I 5 HOH A 167 1116 167 HOH HOH . I 5 HOH A 168 1117 168 HOH HOH . I 5 HOH A 169 1118 169 HOH HOH . I 5 HOH A 170 1119 170 HOH HOH . I 5 HOH A 171 1120 171 HOH HOH . I 5 HOH A 172 1121 172 HOH HOH . I 5 HOH A 173 1122 173 HOH HOH . I 5 HOH A 174 1123 174 HOH HOH . I 5 HOH A 175 1124 175 HOH HOH . I 5 HOH A 176 1125 176 HOH HOH . I 5 HOH A 177 1126 177 HOH HOH . I 5 HOH A 178 1127 178 HOH HOH . I 5 HOH A 179 1128 179 HOH HOH . I 5 HOH A 180 1129 180 HOH HOH . I 5 HOH A 181 1130 181 HOH HOH . I 5 HOH A 182 1131 182 HOH HOH . I 5 HOH A 183 1132 183 HOH HOH . I 5 HOH A 184 1133 184 HOH HOH . I 5 HOH A 185 1134 185 HOH HOH . I 5 HOH A 186 1135 186 HOH HOH . I 5 HOH A 187 1136 187 HOH HOH . I 5 HOH A 188 1137 188 HOH HOH . I 5 HOH A 189 1138 189 HOH HOH . I 5 HOH A 190 1139 190 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 68.009 _atom_site.Cartn_y 6.851 _atom_site.Cartn_z 18.728 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 948 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #