data_3BKP
#
_model_server_result.job_id            dHvEEFMXRSN-LqSoj_oayQ 
_model_server_result.datetime_utc      '2024-11-05 01:17:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3bkp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    3BKP 
#
_exptl.entry_id    3BKP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3BKP 
_cell.length_a            52.358 
_cell.length_b            63.302 
_cell.length_c            63.528 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BKP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3BKP 
_atom_sites.fract_transf_matrix[1][1]    0.019099 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015797 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015741 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 301 301 GOL GOL . 
C 2 GOL A 1 302 302 GOL GOL . 
D 2 GOL A 1 303 303 GOL GOL . 
E 2 GOL A 1 304 304 GOL GOL . 
F 3 HOH A 1 305 1 HOH HOH . 
F 3 HOH A 2 306 2 HOH HOH . 
F 3 HOH A 3 307 3 HOH HOH . 
F 3 HOH A 4 308 4 HOH HOH . 
F 3 HOH A 5 309 5 HOH HOH . 
F 3 HOH A 6 310 6 HOH HOH . 
F 3 HOH A 7 311 7 HOH HOH . 
F 3 HOH A 8 312 8 HOH HOH . 
F 3 HOH A 9 313 9 HOH HOH . 
F 3 HOH A 10 314 10 HOH HOH . 
F 3 HOH A 11 315 11 HOH HOH . 
F 3 HOH A 12 316 12 HOH HOH . 
F 3 HOH A 13 317 13 HOH HOH . 
F 3 HOH A 14 318 14 HOH HOH . 
F 3 HOH A 15 319 15 HOH HOH . 
F 3 HOH A 16 320 16 HOH HOH . 
F 3 HOH A 17 321 17 HOH HOH . 
F 3 HOH A 18 322 18 HOH HOH . 
F 3 HOH A 19 323 20 HOH HOH . 
F 3 HOH A 20 324 21 HOH HOH . 
F 3 HOH A 21 325 22 HOH HOH . 
F 3 HOH A 22 326 23 HOH HOH . 
F 3 HOH A 23 327 24 HOH HOH . 
F 3 HOH A 24 328 25 HOH HOH . 
F 3 HOH A 25 329 26 HOH HOH . 
F 3 HOH A 26 330 27 HOH HOH . 
F 3 HOH A 27 331 28 HOH HOH . 
F 3 HOH A 28 332 29 HOH HOH . 
F 3 HOH A 29 333 30 HOH HOH . 
F 3 HOH A 30 334 31 HOH HOH . 
F 3 HOH A 31 335 32 HOH HOH . 
F 3 HOH A 32 336 33 HOH HOH . 
F 3 HOH A 33 337 34 HOH HOH . 
F 3 HOH A 34 338 35 HOH HOH . 
F 3 HOH A 35 339 36 HOH HOH . 
F 3 HOH A 36 340 37 HOH HOH . 
F 3 HOH A 37 341 38 HOH HOH . 
F 3 HOH A 38 342 40 HOH HOH . 
F 3 HOH A 39 343 41 HOH HOH . 
F 3 HOH A 40 344 42 HOH HOH . 
F 3 HOH A 41 345 43 HOH HOH . 
F 3 HOH A 42 346 44 HOH HOH . 
F 3 HOH A 43 347 45 HOH HOH . 
F 3 HOH A 44 348 46 HOH HOH . 
F 3 HOH A 45 349 47 HOH HOH . 
F 3 HOH A 46 350 48 HOH HOH . 
F 3 HOH A 47 351 49 HOH HOH . 
F 3 HOH A 48 352 50 HOH HOH . 
F 3 HOH A 49 353 51 HOH HOH . 
F 3 HOH A 50 354 52 HOH HOH . 
F 3 HOH A 51 355 53 HOH HOH . 
F 3 HOH A 52 356 54 HOH HOH . 
F 3 HOH A 53 357 55 HOH HOH . 
F 3 HOH A 54 358 56 HOH HOH . 
F 3 HOH A 55 359 58 HOH HOH . 
F 3 HOH A 56 360 59 HOH HOH . 
F 3 HOH A 57 361 60 HOH HOH . 
F 3 HOH A 58 362 61 HOH HOH . 
F 3 HOH A 59 363 62 HOH HOH . 
F 3 HOH A 60 364 63 HOH HOH . 
F 3 HOH A 61 365 64 HOH HOH . 
F 3 HOH A 62 366 65 HOH HOH . 
F 3 HOH A 63 367 66 HOH HOH . 
F 3 HOH A 64 368 67 HOH HOH . 
F 3 HOH A 65 369 68 HOH HOH . 
F 3 HOH A 66 370 69 HOH HOH . 
F 3 HOH A 67 371 70 HOH HOH . 
F 3 HOH A 68 372 71 HOH HOH . 
F 3 HOH A 69 373 72 HOH HOH . 
F 3 HOH A 70 374 73 HOH HOH . 
F 3 HOH A 71 375 74 HOH HOH . 
F 3 HOH A 72 376 75 HOH HOH . 
F 3 HOH A 73 377 76 HOH HOH . 
F 3 HOH A 74 378 78 HOH HOH . 
F 3 HOH A 75 379 79 HOH HOH . 
F 3 HOH A 76 380 80 HOH HOH . 
F 3 HOH A 77 381 81 HOH HOH . 
F 3 HOH A 78 382 82 HOH HOH . 
F 3 HOH A 79 383 83 HOH HOH . 
F 3 HOH A 80 384 84 HOH HOH . 
F 3 HOH A 81 385 85 HOH HOH . 
F 3 HOH A 82 386 86 HOH HOH . 
F 3 HOH A 83 387 88 HOH HOH . 
F 3 HOH A 84 388 89 HOH HOH . 
F 3 HOH A 85 389 90 HOH HOH . 
F 3 HOH A 86 390 91 HOH HOH . 
F 3 HOH A 87 391 92 HOH HOH . 
F 3 HOH A 88 392 94 HOH HOH . 
F 3 HOH A 89 393 95 HOH HOH . 
F 3 HOH A 90 394 98 HOH HOH . 
F 3 HOH A 91 395 99 HOH HOH . 
F 3 HOH A 92 396 100 HOH HOH . 
F 3 HOH A 93 397 102 HOH HOH . 
F 3 HOH A 94 398 103 HOH HOH . 
F 3 HOH A 95 399 104 HOH HOH . 
F 3 HOH A 96 400 105 HOH HOH . 
F 3 HOH A 97 401 106 HOH HOH . 
F 3 HOH A 98 402 107 HOH HOH . 
F 3 HOH A 99 403 108 HOH HOH . 
F 3 HOH A 100 404 109 HOH HOH . 
F 3 HOH A 101 405 110 HOH HOH . 
F 3 HOH A 102 406 111 HOH HOH . 
F 3 HOH A 103 407 112 HOH HOH . 
F 3 HOH A 104 408 113 HOH HOH . 
F 3 HOH A 105 409 114 HOH HOH . 
F 3 HOH A 106 410 116 HOH HOH . 
F 3 HOH A 107 411 117 HOH HOH . 
F 3 HOH A 108 412 118 HOH HOH . 
F 3 HOH A 109 413 119 HOH HOH . 
F 3 HOH A 110 414 120 HOH HOH . 
F 3 HOH A 111 415 122 HOH HOH . 
F 3 HOH A 112 416 123 HOH HOH . 
F 3 HOH A 113 417 125 HOH HOH . 
F 3 HOH A 114 418 126 HOH HOH . 
F 3 HOH A 115 419 127 HOH HOH . 
F 3 HOH A 116 420 129 HOH HOH . 
F 3 HOH A 117 421 130 HOH HOH . 
F 3 HOH A 118 422 131 HOH HOH . 
F 3 HOH A 119 423 132 HOH HOH . 
F 3 HOH A 120 424 133 HOH HOH . 
F 3 HOH A 121 425 135 HOH HOH . 
F 3 HOH A 122 426 136 HOH HOH . 
F 3 HOH A 123 427 137 HOH HOH . 
F 3 HOH A 124 428 138 HOH HOH . 
F 3 HOH A 125 429 141 HOH HOH . 
F 3 HOH A 126 430 142 HOH HOH . 
F 3 HOH A 127 431 143 HOH HOH . 
F 3 HOH A 128 432 144 HOH HOH . 
F 3 HOH A 129 433 145 HOH HOH . 
F 3 HOH A 130 434 146 HOH HOH . 
F 3 HOH A 131 435 147 HOH HOH . 
F 3 HOH A 132 436 149 HOH HOH . 
F 3 HOH A 133 437 150 HOH HOH . 
F 3 HOH A 134 438 153 HOH HOH . 
F 3 HOH A 135 439 154 HOH HOH . 
F 3 HOH A 136 440 155 HOH HOH . 
F 3 HOH A 137 441 158 HOH HOH . 
F 3 HOH A 138 442 159 HOH HOH . 
F 3 HOH A 139 443 160 HOH HOH . 
F 3 HOH A 140 444 161 HOH HOH . 
F 3 HOH A 141 445 162 HOH HOH . 
F 3 HOH A 142 446 163 HOH HOH . 
F 3 HOH A 143 447 164 HOH HOH . 
F 3 HOH A 144 448 165 HOH HOH . 
F 3 HOH A 145 449 166 HOH HOH . 
F 3 HOH A 146 450 168 HOH HOH . 
F 3 HOH A 147 451 170 HOH HOH . 
F 3 HOH A 148 452 171 HOH HOH . 
F 3 HOH A 149 453 172 HOH HOH . 
F 3 HOH A 150 454 175 HOH HOH . 
F 3 HOH A 151 455 176 HOH HOH . 
F 3 HOH A 152 456 177 HOH HOH . 
F 3 HOH A 153 457 178 HOH HOH . 
F 3 HOH A 154 458 179 HOH HOH . 
F 3 HOH A 155 459 180 HOH HOH . 
F 3 HOH A 156 460 182 HOH HOH . 
F 3 HOH A 157 461 183 HOH HOH . 
F 3 HOH A 158 462 184 HOH HOH . 
F 3 HOH A 159 463 187 HOH HOH . 
F 3 HOH A 160 464 188 HOH HOH . 
F 3 HOH A 161 465 190 HOH HOH . 
F 3 HOH A 162 466 192 HOH HOH . 
F 3 HOH A 163 467 193 HOH HOH . 
F 3 HOH A 164 468 194 HOH HOH . 
F 3 HOH A 165 469 195 HOH HOH . 
F 3 HOH A 166 470 196 HOH HOH . 
F 3 HOH A 167 471 199 HOH HOH . 
F 3 HOH A 168 472 200 HOH HOH . 
F 3 HOH A 169 473 203 HOH HOH . 
F 3 HOH A 170 474 204 HOH HOH . 
F 3 HOH A 171 475 206 HOH HOH . 
F 3 HOH A 172 476 207 HOH HOH . 
F 3 HOH A 173 477 209 HOH HOH . 
F 3 HOH A 174 478 210 HOH HOH . 
F 3 HOH A 175 479 212 HOH HOH . 
F 3 HOH A 176 480 217 HOH HOH . 
F 3 HOH A 177 481 218 HOH HOH . 
F 3 HOH A 178 482 219 HOH HOH . 
F 3 HOH A 179 483 221 HOH HOH . 
F 3 HOH A 180 484 228 HOH HOH . 
F 3 HOH A 181 485 231 HOH HOH . 
F 3 HOH A 182 486 233 HOH HOH . 
F 3 HOH A 183 487 234 HOH HOH . 
F 3 HOH A 184 488 235 HOH HOH . 
F 3 HOH A 185 489 1 HOH HOH . 
F 3 HOH A 186 490 2 HOH HOH . 
F 3 HOH A 187 491 4 HOH HOH . 
F 3 HOH A 188 492 7 HOH HOH . 
F 3 HOH A 189 493 16 HOH HOH . 
F 3 HOH A 190 494 24 HOH HOH . 
F 3 HOH A 191 495 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 2 5.621 25.112 4.559 1 45.74 ? C1 GOL 303 A 1 
HETATM 2 O O1 GOL . . . D 2 7.028 25.381 4.621 1 43.97 ? O1 GOL 303 A 1 
HETATM 3 C C2 GOL . . . D 2 5.189 24.905 6.026 1 41.98 ? C2 GOL 303 A 1 
HETATM 4 O O2 GOL . . . D 2 6.438 24.809 6.728 1 51.86 ? O2 GOL 303 A 1 
HETATM 5 C C3 GOL . . . D 2 4.212 23.765 6.436 1 32.77 ? C3 GOL 303 A 1 
HETATM 6 O O3 GOL . . . D 2 2.993 23.441 5.759 1 33.74 ? O3 GOL 303 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#