data_3BKQ # _model_server_result.job_id I77rH7TfgZDEMUiTiUb2zg _model_server_result.datetime_utc '2024-11-06 01:57:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bkq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":658}' # _entry.id 3BKQ # _exptl.entry_id 3BKQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1-O-phosphono-alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BKQ _cell.length_a 70.604 _cell.length_b 74.74 _cell.length_c 86.924 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BKQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id G1P _chem_comp.mon_nstd_flag n _chem_comp.name 1-O-phosphono-alpha-D-glucopyranose _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ALPHA-D-GLUCOSE-1-PHOSPHATE;1-O-phosphono-alpha-D-glucose;1-O-phosphono-D-glucose;1-O-phosphono-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 G1P sing 83 n n C1 O1 G1P sing 84 n n C1 O5 G1P sing 85 n n C1 H1 G1P sing 86 n n C2 C3 G1P sing 87 n n C2 O2 G1P sing 88 n n C2 H2 G1P sing 89 n n C3 C4 G1P sing 90 n n C3 O3 G1P sing 91 n n C3 H3 G1P sing 92 n n C4 C5 G1P sing 93 n n C4 O4 G1P sing 94 n n C4 H4 G1P sing 95 n n C5 C6 G1P sing 96 n n C5 O5 G1P sing 97 n n C5 H5 G1P sing 98 n n C6 O6 G1P sing 99 n n C6 H61 G1P sing 100 n n C6 H62 G1P sing 101 n n O1 P G1P sing 102 n n O2 HO2 G1P sing 103 n n O3 HO3 G1P sing 104 n n O4 HO4 G1P sing 105 n n O6 HO6 G1P sing 106 n n P O1P G1P doub 107 n n P O2P G1P sing 108 n n P O3P G1P sing 109 n n O2P HOP2 G1P sing 110 n n O3P HOP3 G1P sing 111 n n # _pdbx_chem_comp_identifier.comp_id G1P _pdbx_chem_comp_identifier.identifier a-D-Glcp1PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 3BKQ _atom_sites.fract_transf_matrix[1][1] 0.014163 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01338 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011504 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G1P X 1 658 658 G1P G1P . C 3 ZN X 1 500 500 ZN ZN . D 4 HOH X 1 659 1 HOH HOH . D 4 HOH X 2 660 2 HOH HOH . D 4 HOH X 3 661 3 HOH HOH . D 4 HOH X 4 662 4 HOH HOH . D 4 HOH X 5 663 5 HOH HOH . D 4 HOH X 6 664 6 HOH HOH . D 4 HOH X 7 665 7 HOH HOH . D 4 HOH X 8 666 8 HOH HOH . D 4 HOH X 9 667 9 HOH HOH . D 4 HOH X 10 668 10 HOH HOH . D 4 HOH X 11 669 11 HOH HOH . D 4 HOH X 12 670 12 HOH HOH . D 4 HOH X 13 671 13 HOH HOH . D 4 HOH X 14 672 14 HOH HOH . D 4 HOH X 15 673 15 HOH HOH . D 4 HOH X 16 674 16 HOH HOH . D 4 HOH X 17 675 17 HOH HOH . D 4 HOH X 18 676 18 HOH HOH . D 4 HOH X 19 677 19 HOH HOH . D 4 HOH X 20 678 20 HOH HOH . D 4 HOH X 21 679 21 HOH HOH . D 4 HOH X 22 680 22 HOH HOH . D 4 HOH X 23 681 23 HOH HOH . D 4 HOH X 24 682 24 HOH HOH . D 4 HOH X 25 683 25 HOH HOH . D 4 HOH X 26 684 26 HOH HOH . D 4 HOH X 27 685 27 HOH HOH . D 4 HOH X 28 686 28 HOH HOH . D 4 HOH X 29 687 29 HOH HOH . D 4 HOH X 30 688 30 HOH HOH . D 4 HOH X 31 689 31 HOH HOH . D 4 HOH X 32 690 32 HOH HOH . D 4 HOH X 33 691 33 HOH HOH . D 4 HOH X 34 692 34 HOH HOH . D 4 HOH X 35 693 35 HOH HOH . D 4 HOH X 36 694 36 HOH HOH . D 4 HOH X 37 695 37 HOH HOH . D 4 HOH X 38 696 38 HOH HOH . D 4 HOH X 39 697 39 HOH HOH . D 4 HOH X 40 698 40 HOH HOH . D 4 HOH X 41 699 41 HOH HOH . D 4 HOH X 42 700 42 HOH HOH . D 4 HOH X 43 701 43 HOH HOH . D 4 HOH X 44 702 44 HOH HOH . D 4 HOH X 45 703 45 HOH HOH . D 4 HOH X 46 704 46 HOH HOH . D 4 HOH X 47 705 47 HOH HOH . D 4 HOH X 48 706 48 HOH HOH . D 4 HOH X 49 707 49 HOH HOH . D 4 HOH X 50 708 50 HOH HOH . D 4 HOH X 51 709 51 HOH HOH . D 4 HOH X 52 710 52 HOH HOH . D 4 HOH X 53 711 53 HOH HOH . D 4 HOH X 54 712 54 HOH HOH . D 4 HOH X 55 713 55 HOH HOH . D 4 HOH X 56 714 56 HOH HOH . D 4 HOH X 57 715 57 HOH HOH . D 4 HOH X 58 716 58 HOH HOH . D 4 HOH X 59 717 59 HOH HOH . D 4 HOH X 60 718 60 HOH HOH . D 4 HOH X 61 719 61 HOH HOH . D 4 HOH X 62 720 62 HOH HOH . D 4 HOH X 63 721 63 HOH HOH . D 4 HOH X 64 722 64 HOH HOH . D 4 HOH X 65 723 65 HOH HOH . D 4 HOH X 66 724 66 HOH HOH . D 4 HOH X 67 725 67 HOH HOH . D 4 HOH X 68 726 68 HOH HOH . D 4 HOH X 69 727 69 HOH HOH . D 4 HOH X 70 728 70 HOH HOH . D 4 HOH X 71 729 71 HOH HOH . D 4 HOH X 72 730 72 HOH HOH . D 4 HOH X 73 731 73 HOH HOH . D 4 HOH X 74 732 74 HOH HOH . D 4 HOH X 75 733 75 HOH HOH . D 4 HOH X 76 734 76 HOH HOH . D 4 HOH X 77 735 77 HOH HOH . D 4 HOH X 78 736 78 HOH HOH . D 4 HOH X 79 737 79 HOH HOH . D 4 HOH X 80 738 80 HOH HOH . D 4 HOH X 81 739 81 HOH HOH . D 4 HOH X 82 740 82 HOH HOH . D 4 HOH X 83 741 83 HOH HOH . D 4 HOH X 84 742 84 HOH HOH . D 4 HOH X 85 743 85 HOH HOH . D 4 HOH X 86 744 86 HOH HOH . D 4 HOH X 87 745 87 HOH HOH . D 4 HOH X 88 746 88 HOH HOH . D 4 HOH X 89 747 89 HOH HOH . D 4 HOH X 90 748 90 HOH HOH . D 4 HOH X 91 749 91 HOH HOH . D 4 HOH X 92 750 92 HOH HOH . D 4 HOH X 93 751 93 HOH HOH . D 4 HOH X 94 752 94 HOH HOH . D 4 HOH X 95 753 95 HOH HOH . D 4 HOH X 96 754 96 HOH HOH . D 4 HOH X 97 755 97 HOH HOH . D 4 HOH X 98 756 98 HOH HOH . D 4 HOH X 99 757 99 HOH HOH . D 4 HOH X 100 758 100 HOH HOH . D 4 HOH X 101 759 101 HOH HOH . D 4 HOH X 102 760 102 HOH HOH . D 4 HOH X 103 761 103 HOH HOH . D 4 HOH X 104 762 104 HOH HOH . D 4 HOH X 105 763 105 HOH HOH . D 4 HOH X 106 764 106 HOH HOH . D 4 HOH X 107 765 107 HOH HOH . D 4 HOH X 108 766 108 HOH HOH . D 4 HOH X 109 767 109 HOH HOH . D 4 HOH X 110 768 110 HOH HOH . D 4 HOH X 111 769 111 HOH HOH . D 4 HOH X 112 770 112 HOH HOH . D 4 HOH X 113 771 113 HOH HOH . D 4 HOH X 114 772 114 HOH HOH . D 4 HOH X 115 773 115 HOH HOH . D 4 HOH X 116 774 116 HOH HOH . D 4 HOH X 117 775 117 HOH HOH . D 4 HOH X 118 776 118 HOH HOH . D 4 HOH X 119 777 119 HOH HOH . D 4 HOH X 120 778 120 HOH HOH . D 4 HOH X 121 779 121 HOH HOH . D 4 HOH X 122 780 122 HOH HOH . D 4 HOH X 123 781 123 HOH HOH . D 4 HOH X 124 782 124 HOH HOH . D 4 HOH X 125 783 125 HOH HOH . D 4 HOH X 126 784 126 HOH HOH . D 4 HOH X 127 785 127 HOH HOH . D 4 HOH X 128 786 128 HOH HOH . D 4 HOH X 129 787 129 HOH HOH . D 4 HOH X 130 788 130 HOH HOH . D 4 HOH X 131 789 131 HOH HOH . D 4 HOH X 132 790 132 HOH HOH . D 4 HOH X 133 791 133 HOH HOH . D 4 HOH X 134 792 134 HOH HOH . D 4 HOH X 135 793 135 HOH HOH . D 4 HOH X 136 794 136 HOH HOH . D 4 HOH X 137 795 138 HOH HOH . D 4 HOH X 138 796 139 HOH HOH . D 4 HOH X 139 797 140 HOH HOH . D 4 HOH X 140 798 141 HOH HOH . D 4 HOH X 141 799 142 HOH HOH . D 4 HOH X 142 800 143 HOH HOH . D 4 HOH X 143 801 144 HOH HOH . D 4 HOH X 144 802 145 HOH HOH . D 4 HOH X 145 803 146 HOH HOH . D 4 HOH X 146 804 147 HOH HOH . D 4 HOH X 147 805 148 HOH HOH . D 4 HOH X 148 806 149 HOH HOH . D 4 HOH X 149 807 150 HOH HOH . D 4 HOH X 150 808 152 HOH HOH . D 4 HOH X 151 809 153 HOH HOH . D 4 HOH X 152 810 154 HOH HOH . D 4 HOH X 153 811 155 HOH HOH . D 4 HOH X 154 812 156 HOH HOH . D 4 HOH X 155 813 157 HOH HOH . D 4 HOH X 156 814 158 HOH HOH . D 4 HOH X 157 815 159 HOH HOH . D 4 HOH X 158 816 160 HOH HOH . D 4 HOH X 159 817 161 HOH HOH . D 4 HOH X 160 818 162 HOH HOH . D 4 HOH X 161 819 163 HOH HOH . D 4 HOH X 162 820 164 HOH HOH . D 4 HOH X 163 821 165 HOH HOH . D 4 HOH X 164 822 166 HOH HOH . D 4 HOH X 165 823 167 HOH HOH . D 4 HOH X 166 824 168 HOH HOH . D 4 HOH X 167 825 169 HOH HOH . D 4 HOH X 168 826 170 HOH HOH . D 4 HOH X 169 827 171 HOH HOH . D 4 HOH X 170 828 172 HOH HOH . D 4 HOH X 171 829 173 HOH HOH . D 4 HOH X 172 830 174 HOH HOH . D 4 HOH X 173 831 175 HOH HOH . D 4 HOH X 174 832 176 HOH HOH . D 4 HOH X 175 833 177 HOH HOH . D 4 HOH X 176 834 178 HOH HOH . D 4 HOH X 177 835 179 HOH HOH . D 4 HOH X 178 836 180 HOH HOH . D 4 HOH X 179 837 181 HOH HOH . D 4 HOH X 180 838 182 HOH HOH . D 4 HOH X 181 839 183 HOH HOH . D 4 HOH X 182 840 184 HOH HOH . D 4 HOH X 183 841 185 HOH HOH . D 4 HOH X 184 842 186 HOH HOH . D 4 HOH X 185 843 187 HOH HOH . D 4 HOH X 186 844 188 HOH HOH . D 4 HOH X 187 845 189 HOH HOH . D 4 HOH X 188 846 190 HOH HOH . D 4 HOH X 189 847 191 HOH HOH . D 4 HOH X 190 848 192 HOH HOH . D 4 HOH X 191 849 193 HOH HOH . D 4 HOH X 192 850 194 HOH HOH . D 4 HOH X 193 851 195 HOH HOH . D 4 HOH X 194 852 196 HOH HOH . D 4 HOH X 195 853 197 HOH HOH . D 4 HOH X 196 854 198 HOH HOH . D 4 HOH X 197 855 200 HOH HOH . D 4 HOH X 198 856 201 HOH HOH . D 4 HOH X 199 857 202 HOH HOH . D 4 HOH X 200 858 203 HOH HOH . D 4 HOH X 201 859 204 HOH HOH . D 4 HOH X 202 860 205 HOH HOH . D 4 HOH X 203 861 206 HOH HOH . D 4 HOH X 204 862 207 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G1P . . . B 2 -47.649 -13.925 16.559 1 77.97 ? C1 G1P 658 X 1 HETATM 2 C C2 G1P . . . B 2 -47.483 -15.426 16.324 1 77.69 ? C2 G1P 658 X 1 HETATM 3 C C3 G1P . . . B 2 -46.867 -15.67 14.946 1 77.22 ? C3 G1P 658 X 1 HETATM 4 C C4 G1P . . . B 2 -47.768 -15.112 13.853 1 77.78 ? C4 G1P 658 X 1 HETATM 5 C C5 G1P . . . B 2 -48.189 -13.654 14.117 1 78.26 ? C5 G1P 658 X 1 HETATM 6 C C6 G1P . . . B 2 -49.446 -13.297 13.308 1 78.59 ? C6 G1P 658 X 1 HETATM 7 O O1 G1P . . . B 2 -46.364 -13.284 16.707 1 77.83 ? O1 G1P 658 X 1 HETATM 8 O O2 G1P . . . B 2 -46.695 -15.997 17.377 1 77.47 ? O2 G1P 658 X 1 HETATM 9 O O3 G1P . . . B 2 -46.687 -17.067 14.703 1 76.54 ? O3 G1P 658 X 1 HETATM 10 O O4 G1P . . . B 2 -47.084 -15.243 12.595 1 77.84 ? O4 G1P 658 X 1 HETATM 11 O O5 G1P . . . B 2 -48.463 -13.351 15.509 1 78.15 ? O5 G1P 658 X 1 HETATM 12 O O6 G1P . . . B 2 -49.215 -13.293 11.888 1 78.3 ? O6 G1P 658 X 1 HETATM 13 P P G1P . . . B 2 -45.953 -12.426 18.022 1 77.24 ? P G1P 658 X 1 HETATM 14 O O1P G1P . . . B 2 -45.868 -13.415 19.161 1 77.39 ? O1P G1P 658 X 1 HETATM 15 O O2P G1P . . . B 2 -47.076 -11.429 18.178 1 77.76 ? O2P G1P 658 X 1 HETATM 16 O O3P G1P . . . B 2 -44.623 -11.807 17.648 1 76.86 ? O3P G1P 658 X 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #