data_3BL7 # _model_server_result.job_id d87m3Cxw-gNkn1S5RqPIeg _model_server_result.datetime_utc '2024-10-25 20:22:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bl7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":901}' # _entry.id 3BL7 # _exptl.entry_id 3BL7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 381.447 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-{[1-(2-fluorobenzyl)piperidin-4-yl]methoxy}quinazoline-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 118.81 _cell.angle_beta 92.39 _cell.angle_gamma 99.99 _cell.entry_id 3BL7 _cell.length_a 49.257 _cell.length_b 56.271 _cell.length_c 60.334 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BL7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H24 F N5 O' _chem_comp.formula_weight 381.447 _chem_comp.id DD1 _chem_comp.mon_nstd_flag . _chem_comp.name 5-{[1-(2-fluorobenzyl)piperidin-4-yl]methoxy}quinazoline-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F58 C1 DD1 sing 83 n n C1 C6 DD1 doub 84 n y C1 C2 DD1 sing 85 n y C6 C5 DD1 sing 86 n y C5 C4 DD1 doub 87 n y C4 C3 DD1 sing 88 n y C3 C2 DD1 doub 89 n y C2 C13 DD1 sing 90 n n C13 N15 DD1 sing 91 n n N15 C21 DD1 sing 92 n n N15 C17 DD1 sing 93 n n C21 C20 DD1 sing 94 n n C20 C19 DD1 sing 95 n n C19 C18 DD1 sing 96 n n C19 C28 DD1 sing 97 n n C18 C17 DD1 sing 98 n n C28 O30 DD1 sing 99 n n O30 C32 DD1 sing 100 n n C32 C38 DD1 doub 101 n y C32 C34 DD1 sing 102 n y C38 C45 DD1 sing 103 n y C38 C37 DD1 sing 104 n y C45 N54 DD1 sing 105 n n C45 N46 DD1 doub 106 n y N46 C47 DD1 sing 107 n y C47 N56 DD1 sing 108 n n C47 N48 DD1 doub 109 n y N48 C37 DD1 sing 110 n y C37 C36 DD1 doub 111 n y C36 C35 DD1 sing 112 n y C35 C34 DD1 doub 113 n y C6 H6 DD1 sing 114 n n C5 H5 DD1 sing 115 n n C4 H4 DD1 sing 116 n n C3 H3 DD1 sing 117 n n C13 H13 DD1 sing 118 n n C13 H13A DD1 sing 119 n n C21 H21 DD1 sing 120 n n C21 H21A DD1 sing 121 n n C20 H20 DD1 sing 122 n n C20 H20A DD1 sing 123 n n C19 H19 DD1 sing 124 n n C18 H18 DD1 sing 125 n n C18 H18A DD1 sing 126 n n C17 H17 DD1 sing 127 n n C17 H17A DD1 sing 128 n n C28 H28 DD1 sing 129 n n C28 H28A DD1 sing 130 n n N54 HN54 DD1 sing 131 n n N54 HN5A DD1 sing 132 n n N56 HN56 DD1 sing 133 n n N56 HN5B DD1 sing 134 n n C36 H36 DD1 sing 135 n n C35 H35 DD1 sing 136 n n C34 H34 DD1 sing 137 n n # _atom_sites.entry_id 3BL7 _atom_sites.fract_transf_matrix[1][1] 0.020302 _atom_sites.fract_transf_matrix[1][2] 0.003576 _atom_sites.fract_transf_matrix[1][3] 0.003025 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018045 _atom_sites.fract_transf_matrix[2][3] 0.010338 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019118 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DD1 A 1 901 901 DD1 844 . D 3 HOH A 1 902 1 HOH HOH . D 3 HOH A 2 903 3 HOH HOH . D 3 HOH A 3 904 7 HOH HOH . D 3 HOH A 4 905 8 HOH HOH . D 3 HOH A 5 906 10 HOH HOH . D 3 HOH A 6 907 11 HOH HOH . D 3 HOH A 7 908 15 HOH HOH . D 3 HOH A 8 909 16 HOH HOH . D 3 HOH A 9 910 18 HOH HOH . D 3 HOH A 10 911 20 HOH HOH . D 3 HOH A 11 912 21 HOH HOH . D 3 HOH A 12 913 23 HOH HOH . D 3 HOH A 13 914 24 HOH HOH . D 3 HOH A 14 915 25 HOH HOH . D 3 HOH A 15 916 26 HOH HOH . D 3 HOH A 16 917 27 HOH HOH . D 3 HOH A 17 918 31 HOH HOH . D 3 HOH A 18 919 33 HOH HOH . D 3 HOH A 19 920 36 HOH HOH . D 3 HOH A 20 921 38 HOH HOH . D 3 HOH A 21 922 39 HOH HOH . D 3 HOH A 22 923 40 HOH HOH . D 3 HOH A 23 924 41 HOH HOH . D 3 HOH A 24 925 42 HOH HOH . D 3 HOH A 25 926 43 HOH HOH . D 3 HOH A 26 927 45 HOH HOH . D 3 HOH A 27 928 48 HOH HOH . D 3 HOH A 28 929 50 HOH HOH . D 3 HOH A 29 930 51 HOH HOH . D 3 HOH A 30 931 52 HOH HOH . D 3 HOH A 31 932 53 HOH HOH . D 3 HOH A 32 933 59 HOH HOH . D 3 HOH A 33 934 66 HOH HOH . D 3 HOH A 34 935 67 HOH HOH . D 3 HOH A 35 936 70 HOH HOH . D 3 HOH A 36 937 72 HOH HOH . D 3 HOH A 37 938 74 HOH HOH . D 3 HOH A 38 939 78 HOH HOH . D 3 HOH A 39 940 81 HOH HOH . D 3 HOH A 40 941 88 HOH HOH . D 3 HOH A 41 942 92 HOH HOH . D 3 HOH A 42 943 93 HOH HOH . D 3 HOH A 43 944 94 HOH HOH . D 3 HOH A 44 945 95 HOH HOH . D 3 HOH A 45 946 103 HOH HOH . D 3 HOH A 46 947 104 HOH HOH . D 3 HOH A 47 948 108 HOH HOH . D 3 HOH A 48 949 109 HOH HOH . D 3 HOH A 49 950 111 HOH HOH . D 3 HOH A 50 951 114 HOH HOH . D 3 HOH A 51 952 117 HOH HOH . D 3 HOH A 52 953 121 HOH HOH . D 3 HOH A 53 954 125 HOH HOH . D 3 HOH A 54 955 127 HOH HOH . D 3 HOH A 55 956 128 HOH HOH . D 3 HOH A 56 957 129 HOH HOH . D 3 HOH A 57 958 130 HOH HOH . D 3 HOH A 58 959 131 HOH HOH . D 3 HOH A 59 960 132 HOH HOH . D 3 HOH A 60 961 135 HOH HOH . D 3 HOH A 61 962 138 HOH HOH . D 3 HOH A 62 963 139 HOH HOH . D 3 HOH A 63 964 140 HOH HOH . D 3 HOH A 64 965 142 HOH HOH . D 3 HOH A 65 966 146 HOH HOH . D 3 HOH A 66 967 147 HOH HOH . D 3 HOH A 67 968 148 HOH HOH . D 3 HOH A 68 969 150 HOH HOH . D 3 HOH A 69 970 151 HOH HOH . D 3 HOH A 70 971 152 HOH HOH . D 3 HOH A 71 972 154 HOH HOH . D 3 HOH A 72 973 156 HOH HOH . D 3 HOH A 73 974 158 HOH HOH . D 3 HOH A 74 975 160 HOH HOH . D 3 HOH A 75 976 163 HOH HOH . D 3 HOH A 76 977 164 HOH HOH . D 3 HOH A 77 978 166 HOH HOH . D 3 HOH A 78 979 167 HOH HOH . D 3 HOH A 79 980 171 HOH HOH . D 3 HOH A 80 981 172 HOH HOH . D 3 HOH A 81 982 174 HOH HOH . D 3 HOH A 82 983 177 HOH HOH . D 3 HOH A 83 984 178 HOH HOH . D 3 HOH A 84 985 182 HOH HOH . D 3 HOH A 85 986 184 HOH HOH . D 3 HOH A 86 987 188 HOH HOH . D 3 HOH A 87 988 189 HOH HOH . D 3 HOH A 88 989 190 HOH HOH . D 3 HOH A 89 990 192 HOH HOH . D 3 HOH A 90 991 193 HOH HOH . D 3 HOH A 91 992 194 HOH HOH . D 3 HOH A 92 993 200 HOH HOH . D 3 HOH A 93 994 206 HOH HOH . D 3 HOH A 94 995 210 HOH HOH . D 3 HOH A 95 996 212 HOH HOH . D 3 HOH A 96 997 214 HOH HOH . D 3 HOH A 97 998 223 HOH HOH . D 3 HOH A 98 999 229 HOH HOH . D 3 HOH A 99 1000 232 HOH HOH . D 3 HOH A 100 1001 234 HOH HOH . D 3 HOH A 101 1002 235 HOH HOH . D 3 HOH A 102 1003 239 HOH HOH . D 3 HOH A 103 1004 245 HOH HOH . D 3 HOH A 104 1005 246 HOH HOH . E 3 HOH B 1 338 4 HOH HOH . E 3 HOH B 2 339 5 HOH HOH . E 3 HOH B 3 340 6 HOH HOH . E 3 HOH B 4 341 9 HOH HOH . E 3 HOH B 5 342 12 HOH HOH . E 3 HOH B 6 343 13 HOH HOH . E 3 HOH B 7 344 14 HOH HOH . E 3 HOH B 8 345 17 HOH HOH . E 3 HOH B 9 346 19 HOH HOH . E 3 HOH B 10 347 22 HOH HOH . E 3 HOH B 11 348 28 HOH HOH . E 3 HOH B 12 349 29 HOH HOH . E 3 HOH B 13 350 30 HOH HOH . E 3 HOH B 14 351 32 HOH HOH . E 3 HOH B 15 352 34 HOH HOH . E 3 HOH B 16 353 35 HOH HOH . E 3 HOH B 17 354 37 HOH HOH . E 3 HOH B 18 355 46 HOH HOH . E 3 HOH B 19 356 47 HOH HOH . E 3 HOH B 20 357 49 HOH HOH . E 3 HOH B 21 358 54 HOH HOH . E 3 HOH B 22 359 55 HOH HOH . E 3 HOH B 23 360 56 HOH HOH . E 3 HOH B 24 361 57 HOH HOH . E 3 HOH B 25 362 58 HOH HOH . E 3 HOH B 26 363 60 HOH HOH . E 3 HOH B 27 364 61 HOH HOH . E 3 HOH B 28 365 62 HOH HOH . E 3 HOH B 29 366 63 HOH HOH . E 3 HOH B 30 367 64 HOH HOH . E 3 HOH B 31 368 65 HOH HOH . E 3 HOH B 32 369 68 HOH HOH . E 3 HOH B 33 370 71 HOH HOH . E 3 HOH B 34 371 73 HOH HOH . E 3 HOH B 35 372 76 HOH HOH . E 3 HOH B 36 373 79 HOH HOH . E 3 HOH B 37 374 80 HOH HOH . E 3 HOH B 38 375 82 HOH HOH . E 3 HOH B 39 376 83 HOH HOH . E 3 HOH B 40 377 84 HOH HOH . E 3 HOH B 41 378 85 HOH HOH . E 3 HOH B 42 379 86 HOH HOH . E 3 HOH B 43 380 87 HOH HOH . E 3 HOH B 44 381 89 HOH HOH . E 3 HOH B 45 382 90 HOH HOH . E 3 HOH B 46 383 91 HOH HOH . E 3 HOH B 47 384 96 HOH HOH . E 3 HOH B 48 385 97 HOH HOH . E 3 HOH B 49 386 101 HOH HOH . E 3 HOH B 50 387 102 HOH HOH . E 3 HOH B 51 388 105 HOH HOH . E 3 HOH B 52 389 106 HOH HOH . E 3 HOH B 53 390 110 HOH HOH . E 3 HOH B 54 391 112 HOH HOH . E 3 HOH B 55 392 113 HOH HOH . E 3 HOH B 56 393 115 HOH HOH . E 3 HOH B 57 394 118 HOH HOH . E 3 HOH B 58 395 119 HOH HOH . E 3 HOH B 59 396 120 HOH HOH . E 3 HOH B 60 397 122 HOH HOH . E 3 HOH B 61 398 123 HOH HOH . E 3 HOH B 62 399 124 HOH HOH . E 3 HOH B 63 400 126 HOH HOH . E 3 HOH B 64 401 133 HOH HOH . E 3 HOH B 65 402 136 HOH HOH . E 3 HOH B 66 403 137 HOH HOH . E 3 HOH B 67 404 141 HOH HOH . E 3 HOH B 68 405 145 HOH HOH . E 3 HOH B 69 406 159 HOH HOH . E 3 HOH B 70 407 161 HOH HOH . E 3 HOH B 71 408 165 HOH HOH . E 3 HOH B 72 409 168 HOH HOH . E 3 HOH B 73 410 169 HOH HOH . E 3 HOH B 74 411 170 HOH HOH . E 3 HOH B 75 412 173 HOH HOH . E 3 HOH B 76 413 175 HOH HOH . E 3 HOH B 77 414 176 HOH HOH . E 3 HOH B 78 415 179 HOH HOH . E 3 HOH B 79 416 180 HOH HOH . E 3 HOH B 80 417 183 HOH HOH . E 3 HOH B 81 418 186 HOH HOH . E 3 HOH B 82 419 196 HOH HOH . E 3 HOH B 83 420 197 HOH HOH . E 3 HOH B 84 421 198 HOH HOH . E 3 HOH B 85 422 199 HOH HOH . E 3 HOH B 86 423 201 HOH HOH . E 3 HOH B 87 424 204 HOH HOH . E 3 HOH B 88 425 207 HOH HOH . E 3 HOH B 89 426 208 HOH HOH . E 3 HOH B 90 427 209 HOH HOH . E 3 HOH B 91 428 211 HOH HOH . E 3 HOH B 92 429 213 HOH HOH . E 3 HOH B 93 430 215 HOH HOH . E 3 HOH B 94 431 217 HOH HOH . E 3 HOH B 95 432 218 HOH HOH . E 3 HOH B 96 433 219 HOH HOH . E 3 HOH B 97 434 220 HOH HOH . E 3 HOH B 98 435 221 HOH HOH . E 3 HOH B 99 436 225 HOH HOH . E 3 HOH B 100 437 226 HOH HOH . E 3 HOH B 101 438 227 HOH HOH . E 3 HOH B 102 439 231 HOH HOH . E 3 HOH B 103 440 233 HOH HOH . E 3 HOH B 104 441 236 HOH HOH . E 3 HOH B 105 442 240 HOH HOH . E 3 HOH B 106 443 241 HOH HOH . E 3 HOH B 107 444 243 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F58 DD1 . . . C 2 7.892 -3.671 17.408 1 28.18 ? F58 DD1 901 A 1 HETATM 2 C C1 DD1 . . . C 2 8.848 -2.729 17.426 1 27.77 ? C1 DD1 901 A 1 HETATM 3 C C6 DD1 . . . C 2 10.18 -3.108 17.279 1 27.14 ? C6 DD1 901 A 1 HETATM 4 C C5 DD1 . . . C 2 11.183 -2.144 17.291 1 27.37 ? C5 DD1 901 A 1 HETATM 5 C C4 DD1 . . . C 2 10.873 -0.792 17.447 1 27.73 ? C4 DD1 901 A 1 HETATM 6 C C3 DD1 . . . C 2 9.55 -0.364 17.602 1 27.97 ? C3 DD1 901 A 1 HETATM 7 C C2 DD1 . . . C 2 8.504 -1.286 17.617 1 27.33 ? C2 DD1 901 A 1 HETATM 8 C C13 DD1 . . . C 2 7.07 -0.796 17.758 1 27.09 ? C13 DD1 901 A 1 HETATM 9 N N15 DD1 . . . C 2 6.359 -1.027 19.027 1 25.29 ? N15 DD1 901 A 1 HETATM 10 C C21 DD1 . . . C 2 6.717 -2.079 19.979 1 23.91 ? C21 DD1 901 A 1 HETATM 11 C C20 DD1 . . . C 2 5.751 -2.008 21.174 1 22.63 ? C20 DD1 901 A 1 HETATM 12 C C19 DD1 . . . C 2 5.667 -0.607 21.794 1 21.03 ? C19 DD1 901 A 1 HETATM 13 C C18 DD1 . . . C 2 5.366 0.431 20.705 1 23.23 ? C18 DD1 901 A 1 HETATM 14 C C17 DD1 . . . C 2 5.205 -0.173 19.312 1 24.57 ? C17 DD1 901 A 1 HETATM 15 C C28 DD1 . . . C 2 4.679 -0.573 22.98 1 19.1 ? C28 DD1 901 A 1 HETATM 16 O O30 DD1 . . . C 2 3.577 0.371 22.948 1 14.1 ? O30 DD1 901 A 1 HETATM 17 C C32 DD1 . . . C 2 3.001 0.86 24.107 1 12.98 ? C32 DD1 901 A 1 HETATM 18 C C38 DD1 . . . C 2 1.982 1.948 24.066 1 13.87 ? C38 DD1 901 A 1 HETATM 19 C C45 DD1 . . . C 2 1.501 2.587 22.813 1 13.24 ? C45 DD1 901 A 1 HETATM 20 N N54 DD1 . . . C 2 1.962 2.225 21.598 1 13.65 ? N54 DD1 901 A 1 HETATM 21 N N46 DD1 . . . C 2 0.587 3.562 22.903 1 12.89 ? N46 DD1 901 A 1 HETATM 22 C C47 DD1 . . . C 2 0.086 3.974 24.099 1 13.56 ? C47 DD1 901 A 1 HETATM 23 N N56 DD1 . . . C 2 -0.839 4.954 24.094 1 13.29 ? N56 DD1 901 A 1 HETATM 24 N N48 DD1 . . . C 2 0.458 3.431 25.288 1 13.76 ? N48 DD1 901 A 1 HETATM 25 C C37 DD1 . . . C 2 1.381 2.448 25.34 1 13.7 ? C37 DD1 901 A 1 HETATM 26 C C36 DD1 . . . C 2 1.772 1.895 26.544 1 13.11 ? C36 DD1 901 A 1 HETATM 27 C C35 DD1 . . . C 2 2.733 0.884 26.545 1 13.51 ? C35 DD1 901 A 1 HETATM 28 C C34 DD1 . . . C 2 3.33 0.384 25.372 1 13.16 ? C34 DD1 901 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #