data_3BLQ # _model_server_result.job_id xfLpQTGlUMAcK6pS784-kQ _model_server_result.datetime_utc '2024-11-04 20:22:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3blq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":332}' # _entry.id 3BLQ # _exptl.entry_id 3BLQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BLQ _cell.length_a 173.13 _cell.length_b 173.13 _cell.length_c 95.64 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BLQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TYR 186 A TYR 185 1_555 A N TPO 187 A TPO 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C TPO 187 A TPO 186 1_555 A N ASN 188 A ASN 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 3BLQ _atom_sites.fract_transf_matrix[1][1] 0.005776 _atom_sites.fract_transf_matrix[1][2] 0.003335 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00667 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010456 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 331 1 MG MG . D 4 ATP A 1 332 326 ATP ATP . E 5 TRS B 1 260 1 TRS TRS . F 6 HOH A 1 333 2 HOH HOH . F 6 HOH A 2 334 8 HOH HOH . F 6 HOH A 3 335 11 HOH HOH . F 6 HOH A 4 336 12 HOH HOH . F 6 HOH A 5 337 16 HOH HOH . F 6 HOH A 6 338 20 HOH HOH . F 6 HOH A 7 339 21 HOH HOH . F 6 HOH A 8 340 22 HOH HOH . F 6 HOH A 9 341 24 HOH HOH . F 6 HOH A 10 342 25 HOH HOH . F 6 HOH A 11 343 26 HOH HOH . F 6 HOH A 12 344 27 HOH HOH . F 6 HOH A 13 345 29 HOH HOH . F 6 HOH A 14 346 30 HOH HOH . G 6 HOH B 1 261 1 HOH HOH . G 6 HOH B 2 262 3 HOH HOH . G 6 HOH B 3 263 4 HOH HOH . G 6 HOH B 4 264 5 HOH HOH . G 6 HOH B 5 265 6 HOH HOH . G 6 HOH B 6 266 7 HOH HOH . G 6 HOH B 7 267 9 HOH HOH . G 6 HOH B 8 268 10 HOH HOH . G 6 HOH B 9 269 13 HOH HOH . G 6 HOH B 10 270 14 HOH HOH . G 6 HOH B 11 271 15 HOH HOH . G 6 HOH B 12 272 17 HOH HOH . G 6 HOH B 13 273 18 HOH HOH . G 6 HOH B 14 274 19 HOH HOH . G 6 HOH B 15 275 23 HOH HOH . G 6 HOH B 16 276 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . D 4 46.128 -23.101 -9.814 1 192.06 ? PG ATP 332 A 1 HETATM 2 O O1G ATP . . . D 4 46.336 -24.592 -9.939 1 197.11 ? O1G ATP 332 A 1 HETATM 3 O O2G ATP . . . D 4 46.598 -22.537 -8.494 1 186.42 ? O2G ATP 332 A 1 HETATM 4 O O3G ATP . . . D 4 44.781 -22.593 -10.276 1 188.88 ? O3G ATP 332 A 1 HETATM 5 P PB ATP . . . D 4 47.335 -23.196 -12.34 1 129.02 ? PB ATP 332 A 1 HETATM 6 O O1B ATP . . . D 4 48.456 -24.228 -12.256 1 94.74 ? O1B ATP 332 A 1 HETATM 7 O O2B ATP . . . D 4 45.95 -23.607 -12.785 1 130.45 ? O2B ATP 332 A 1 HETATM 8 O O3B ATP . . . D 4 47.144 -22.493 -10.903 1 465.6 ? O3B ATP 332 A 1 HETATM 9 P PA ATP . . . D 4 48.378 -20.545 -12.817 1 139.83 ? PA ATP 332 A 1 HETATM 10 O O1A ATP . . . D 4 47.668 -19.475 -13.609 1 140.38 ? O1A ATP 332 A 1 HETATM 11 O O2A ATP . . . D 4 48.359 -20.441 -11.31 1 135.77 ? O2A ATP 332 A 1 HETATM 12 O O3A ATP . . . D 4 47.728 -21.949 -13.295 1 355.74 ? O3A ATP 332 A 1 HETATM 13 O O5' ATP . . . D 4 49.918 -20.584 -13.31 1 122.59 ? O5' ATP 332 A 1 HETATM 14 C C5' ATP . . . D 4 50.711 -21.769 -13.231 1 129.14 ? C5' ATP 332 A 1 HETATM 15 C C4' ATP . . . D 4 52.203 -21.434 -13.271 1 130.12 ? C4' ATP 332 A 1 HETATM 16 O O4' ATP . . . D 4 52.408 -20.149 -13.871 1 117.53 ? O4' ATP 332 A 1 HETATM 17 C C3' ATP . . . D 4 52.84 -21.404 -11.881 1 133.38 ? C3' ATP 332 A 1 HETATM 18 O O3' ATP . . . D 4 53.842 -22.431 -11.763 1 130 ? O3' ATP 332 A 1 HETATM 19 C C2' ATP . . . D 4 53.446 -20.015 -11.745 1 128.63 ? C2' ATP 332 A 1 HETATM 20 O O2' ATP . . . D 4 54.777 -20.062 -11.21 1 133.64 ? O2' ATP 332 A 1 HETATM 21 C C1' ATP . . . D 4 53.414 -19.427 -13.155 1 116.27 ? C1' ATP 332 A 1 HETATM 22 N N9 ATP . . . D 4 53.054 -17.988 -13.104 1 103.17 ? N9 ATP 332 A 1 HETATM 23 C C8 ATP . . . D 4 51.799 -17.509 -13.1 1 94.02 ? C8 ATP 332 A 1 HETATM 24 N N7 ATP . . . D 4 51.783 -16.154 -13.045 1 85.71 ? N7 ATP 332 A 1 HETATM 25 C C5 ATP . . . D 4 53.059 -15.742 -13.011 1 87.75 ? C5 ATP 332 A 1 HETATM 26 C C6 ATP . . . D 4 53.743 -14.433 -12.947 1 83.75 ? C6 ATP 332 A 1 HETATM 27 N N6 ATP . . . D 4 53.027 -13.281 -12.905 1 80 ? N6 ATP 332 A 1 HETATM 28 N N1 ATP . . . D 4 55.094 -14.436 -12.933 1 81.5 ? N1 ATP 332 A 1 HETATM 29 C C2 ATP . . . D 4 55.801 -15.579 -12.97 1 85.59 ? C2 ATP 332 A 1 HETATM 30 N N3 ATP . . . D 4 55.242 -16.802 -13.029 1 91.99 ? N3 ATP 332 A 1 HETATM 31 C C4 ATP . . . D 4 53.896 -16.951 -13.052 1 95.07 ? C4 ATP 332 A 1 # _model_server_stats.io_time_ms 91 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 31 #