data_3BLS # _model_server_result.job_id UL1dyooVyqvwtSQWhTDdAg _model_server_result.datetime_utc '2024-11-06 02:55:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bls # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":362}' # _entry.id 3BLS # _exptl.entry_id 3BLS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 136.944 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'M-AMINOPHENYLBORONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.3 _cell.angle_gamma 90 _cell.entry_id 3BLS _cell.length_a 119.38 _cell.length_b 78.97 _cell.length_c 99.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BLS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 61 A SER 64 1_555 C B APB . A APB 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.655 ? covale ? covale2 B OG SER 61 B SER 64 1_555 D B APB . B APB 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.666 ? # _chem_comp.formula 'C6 H8 B N O2' _chem_comp.formula_weight 136.944 _chem_comp.id APB _chem_comp.mon_nstd_flag . _chem_comp.name 'M-AMINOPHENYLBORONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag B O1 APB sing 13 n n B O2 APB sing 14 n n B C1 APB sing 15 n n O1 HO1 APB sing 16 n n O2 HO2 APB sing 17 n n C1 C2 APB sing 18 n y C1 C6 APB doub 19 n y C2 C3 APB doub 20 n y C2 H2 APB sing 21 n n C3 C4 APB sing 22 n y C3 N1 APB sing 23 n n C4 C5 APB doub 24 n y C4 H4 APB sing 25 n n C5 C6 APB sing 26 n y C5 H5 APB sing 27 n n C6 H6 APB sing 28 n n N1 HN11 APB sing 29 n n N1 HN12 APB sing 30 n n # _atom_sites.entry_id 3BLS _atom_sites.fract_transf_matrix[1][1] 0.008377 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00414 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012663 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 APB A 1 362 361 APB APB . D 2 APB B 1 362 361 APB APB . E 3 HOH A 1 363 362 HOH HOH . E 3 HOH A 2 364 363 HOH HOH . E 3 HOH A 3 365 364 HOH HOH . E 3 HOH A 4 366 365 HOH HOH . E 3 HOH A 5 367 366 HOH HOH . E 3 HOH A 6 368 367 HOH HOH . E 3 HOH A 7 369 368 HOH HOH . E 3 HOH A 8 370 369 HOH HOH . E 3 HOH A 9 371 370 HOH HOH . E 3 HOH A 10 372 371 HOH HOH . E 3 HOH A 11 373 372 HOH HOH . E 3 HOH A 12 374 373 HOH HOH . E 3 HOH A 13 375 374 HOH HOH . E 3 HOH A 14 376 375 HOH HOH . E 3 HOH A 15 377 376 HOH HOH . E 3 HOH A 16 378 377 HOH HOH . E 3 HOH A 17 379 378 HOH HOH . E 3 HOH A 18 380 379 HOH HOH . E 3 HOH A 19 381 380 HOH HOH . E 3 HOH A 20 382 381 HOH HOH . E 3 HOH A 21 383 382 HOH HOH . E 3 HOH A 22 384 383 HOH HOH . E 3 HOH A 23 385 384 HOH HOH . E 3 HOH A 24 386 385 HOH HOH . E 3 HOH A 25 387 386 HOH HOH . E 3 HOH A 26 388 387 HOH HOH . E 3 HOH A 27 389 388 HOH HOH . E 3 HOH A 28 390 389 HOH HOH . E 3 HOH A 29 391 390 HOH HOH . E 3 HOH A 30 392 391 HOH HOH . E 3 HOH A 31 393 392 HOH HOH . E 3 HOH A 32 394 393 HOH HOH . E 3 HOH A 33 395 394 HOH HOH . E 3 HOH A 34 396 395 HOH HOH . E 3 HOH A 35 397 396 HOH HOH . E 3 HOH A 36 398 397 HOH HOH . E 3 HOH A 37 399 398 HOH HOH . E 3 HOH A 38 400 399 HOH HOH . E 3 HOH A 39 401 400 HOH HOH . E 3 HOH A 40 402 401 HOH HOH . E 3 HOH A 41 403 402 HOH HOH . E 3 HOH A 42 404 403 HOH HOH . E 3 HOH A 43 405 404 HOH HOH . E 3 HOH A 44 406 405 HOH HOH . E 3 HOH A 45 407 406 HOH HOH . E 3 HOH A 46 408 407 HOH HOH . E 3 HOH A 47 409 408 HOH HOH . E 3 HOH A 48 410 409 HOH HOH . E 3 HOH A 49 411 410 HOH HOH . E 3 HOH A 50 412 411 HOH HOH . E 3 HOH A 51 413 412 HOH HOH . E 3 HOH A 52 414 413 HOH HOH . E 3 HOH A 53 415 414 HOH HOH . E 3 HOH A 54 416 415 HOH HOH . E 3 HOH A 55 417 416 HOH HOH . E 3 HOH A 56 418 417 HOH HOH . E 3 HOH A 57 419 407 HOH HOH . F 3 HOH B 1 363 362 HOH HOH . F 3 HOH B 2 364 363 HOH HOH . F 3 HOH B 3 365 364 HOH HOH . F 3 HOH B 4 366 365 HOH HOH . F 3 HOH B 5 367 366 HOH HOH . F 3 HOH B 6 368 367 HOH HOH . F 3 HOH B 7 369 368 HOH HOH . F 3 HOH B 8 370 369 HOH HOH . F 3 HOH B 9 371 370 HOH HOH . F 3 HOH B 10 372 371 HOH HOH . F 3 HOH B 11 373 372 HOH HOH . F 3 HOH B 12 374 373 HOH HOH . F 3 HOH B 13 375 374 HOH HOH . F 3 HOH B 14 376 375 HOH HOH . F 3 HOH B 15 377 376 HOH HOH . F 3 HOH B 16 378 377 HOH HOH . F 3 HOH B 17 379 378 HOH HOH . F 3 HOH B 18 380 379 HOH HOH . F 3 HOH B 19 381 380 HOH HOH . F 3 HOH B 20 382 381 HOH HOH . F 3 HOH B 21 383 382 HOH HOH . F 3 HOH B 22 384 383 HOH HOH . F 3 HOH B 23 385 384 HOH HOH . F 3 HOH B 24 386 385 HOH HOH . F 3 HOH B 25 387 386 HOH HOH . F 3 HOH B 26 388 387 HOH HOH . F 3 HOH B 27 389 388 HOH HOH . F 3 HOH B 28 390 389 HOH HOH . F 3 HOH B 29 391 390 HOH HOH . F 3 HOH B 30 392 391 HOH HOH . F 3 HOH B 31 393 392 HOH HOH . F 3 HOH B 32 394 393 HOH HOH . F 3 HOH B 33 395 394 HOH HOH . F 3 HOH B 34 396 395 HOH HOH . F 3 HOH B 35 397 396 HOH HOH . F 3 HOH B 36 398 397 HOH HOH . F 3 HOH B 37 399 398 HOH HOH . F 3 HOH B 38 400 399 HOH HOH . F 3 HOH B 39 401 400 HOH HOH . F 3 HOH B 40 402 401 HOH HOH . F 3 HOH B 41 403 402 HOH HOH . F 3 HOH B 42 404 403 HOH HOH . F 3 HOH B 43 405 404 HOH HOH . F 3 HOH B 44 406 405 HOH HOH . F 3 HOH B 45 407 406 HOH HOH . F 3 HOH B 46 408 408 HOH HOH . F 3 HOH B 47 409 409 HOH HOH . F 3 HOH B 48 410 410 HOH HOH . F 3 HOH B 49 411 411 HOH HOH . F 3 HOH B 50 412 412 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B APB . . . C 2 25.985 5.053 17.246 1 51.95 ? B APB 362 A 1 HETATM 2 O O1 APB . . . C 2 24.85 4.071 16.692 1 65.41 ? O1 APB 362 A 1 HETATM 3 O O2 APB . . . C 2 25.889 6.539 16.49 1 77.95 ? O2 APB 362 A 1 HETATM 4 C C1 APB . . . C 2 25.667 5.322 18.864 1 64.78 ? C1 APB 362 A 1 HETATM 5 C C2 APB . . . C 2 24.51 4.777 19.423 1 87.11 ? C2 APB 362 A 1 HETATM 6 C C3 APB . . . C 2 24.164 5.026 20.753 1 100 ? C3 APB 362 A 1 HETATM 7 C C4 APB . . . C 2 24.978 5.894 21.486 1 100 ? C4 APB 362 A 1 HETATM 8 C C5 APB . . . C 2 26.12 6.469 20.919 1 76.44 ? C5 APB 362 A 1 HETATM 9 C C6 APB . . . C 2 26.451 6.212 19.591 1 68.65 ? C6 APB 362 A 1 HETATM 10 N N1 APB . . . C 2 23.03 4.463 21.292 1 23.92 ? N1 APB 362 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #