data_3BLW # _model_server_result.job_id LZxN57DF6eAnBtvm0OMtAA _model_server_result.datetime_utc '2025-01-02 20:35:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3blw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":2004}' # _entry.id 3BLW # _exptl.entry_id 3BLW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 347.221 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ADENOSINE MONOPHOSPHATE' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 98.96 _cell.angle_beta 110.23 _cell.angle_gamma 106.63 _cell.entry_id 3BLW _cell.length_a 113.157 _cell.length_b 116.346 _cell.length_c 163.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BLW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? octameric 8 author_defined_assembly 1 ? octameric 8 author_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 PISA tetrameric 4 software_defined_assembly 4 PISA tetrameric 4 software_defined_assembly 5 PISA tetrameric 4 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,Q,R,S,T,U,V,W,X 1 1 I,J,K,L,M,N,O,P,Y,Z,AA,BA,CA,DA,EA,FA 2 1 A,B,C,D,Q,R,S,T 3 1 E,F,G,H,U,V,W,X 4 1 I,J,K,L,Y,Z,AA,BA 5 1 M,N,O,P,CA,DA,EA,FA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 R N N ? 4 T N N ? 4 V N N ? 4 X N N ? 4 Z N N ? 4 BA N N ? 4 DA N N ? 4 FA N N # _chem_comp.formula 'C10 H14 N5 O7 P' _chem_comp.formula_weight 347.221 _chem_comp.id AMP _chem_comp.mon_nstd_flag . _chem_comp.name 'ADENOSINE MONOPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P AMP doub 13 n n P O2P AMP sing 14 n n P O3P AMP sing 15 n n P O5' AMP sing 16 n n O2P HOP2 AMP sing 17 n n O3P HOP3 AMP sing 18 n n O5' C5' AMP sing 19 n n C5' C4' AMP sing 20 n n C5' "H5'1" AMP sing 21 n n C5' "H5'2" AMP sing 22 n n C4' O4' AMP sing 23 n n C4' C3' AMP sing 24 n n C4' H4' AMP sing 25 n n O4' C1' AMP sing 26 n n C3' O3' AMP sing 27 n n C3' C2' AMP sing 28 n n C3' H3' AMP sing 29 n n O3' HO3' AMP sing 30 n n C2' O2' AMP sing 31 n n C2' C1' AMP sing 32 n n C2' H2' AMP sing 33 n n O2' HO2' AMP sing 34 n n C1' N9 AMP sing 35 n n C1' H1' AMP sing 36 n n N9 C8 AMP sing 37 n y N9 C4 AMP sing 38 n y C8 N7 AMP doub 39 n y C8 H8 AMP sing 40 n n N7 C5 AMP sing 41 n y C5 C6 AMP sing 42 n y C5 C4 AMP doub 43 n y C6 N6 AMP sing 44 n n C6 N1 AMP doub 45 n y N6 HN61 AMP sing 46 n n N6 HN62 AMP sing 47 n n N1 C2 AMP sing 48 n y C2 N3 AMP doub 49 n y C2 H2 AMP sing 50 n n N3 C4 AMP sing 51 n y # _atom_sites.entry_id 3BLW _atom_sites.fract_transf_matrix[1][1] 0.008837 _atom_sites.fract_transf_matrix[1][2] 0.00264 _atom_sites.fract_transf_matrix[1][3] 0.004177 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00897 _atom_sites.fract_transf_matrix[2][3] 0.002651 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006792 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 3 FLC A 1 1001 1001 FLC FLC . R 4 AMP A 1 2001 2001 AMP AMP . S 3 FLC C 1 1002 1002 FLC FLC . T 4 AMP C 1 2002 2002 AMP AMP . U 3 FLC E 1 1003 1003 FLC FLC . V 4 AMP E 1 2003 2003 AMP AMP . W 3 FLC G 1 1004 1004 FLC FLC . X 4 AMP G 1 2004 2004 AMP AMP . Y 3 FLC I 1 1005 1005 FLC FLC . Z 4 AMP I 1 2005 2005 AMP AMP . AA 3 FLC K 1 1006 1006 FLC FLC . BA 4 AMP K 1 2006 2006 AMP AMP . CA 3 FLC M 1 1007 1007 FLC FLC . DA 4 AMP M 1 2007 2007 AMP AMP . EA 3 FLC O 1 1008 1008 FLC FLC . FA 4 AMP O 1 2008 2008 AMP AMP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P AMP . . . X 4 -35.791 52.071 -61.411 1 164 ? P AMP 2004 G 1 HETATM 2 O O1P AMP . . . X 4 -37.038 52.854 -61.747 1 164 ? O1P AMP 2004 G 1 HETATM 3 O O2P AMP . . . X 4 -34.989 51.633 -62.613 1 164 ? O2P AMP 2004 G 1 HETATM 4 O O3P AMP . . . X 4 -35.991 50.996 -60.37 1 164 ? O3P AMP 2004 G 1 HETATM 5 O O5' AMP . . . X 4 -34.842 53.147 -60.681 1 164 ? O5' AMP 2004 G 1 HETATM 6 C C5' AMP . . . X 4 -34.072 54.071 -61.448 1 164 ? C5' AMP 2004 G 1 HETATM 7 C C4' AMP . . . X 4 -34.033 55.416 -60.732 1 164 ? C4' AMP 2004 G 1 HETATM 8 O O4' AMP . . . X 4 -32.76 55.584 -60.102 1 164 ? O4' AMP 2004 G 1 HETATM 9 C C3' AMP . . . X 4 -34.222 56.564 -61.715 1 164 ? C3' AMP 2004 G 1 HETATM 10 O O3' AMP . . . X 4 -35.369 57.332 -61.336 1 164 ? O3' AMP 2004 G 1 HETATM 11 C C2' AMP . . . X 4 -32.976 57.426 -61.605 1 164 ? C2' AMP 2004 G 1 HETATM 12 O O2' AMP . . . X 4 -33.34 58.734 -61.152 1 164 ? O2' AMP 2004 G 1 HETATM 13 C C1' AMP . . . X 4 -32.086 56.758 -60.566 1 164 ? C1' AMP 2004 G 1 HETATM 14 N N9 AMP . . . X 4 -30.796 56.374 -61.192 1 164 ? N9 AMP 2004 G 1 HETATM 15 C C8 AMP . . . X 4 -30.514 55.18 -61.746 1 164 ? C8 AMP 2004 G 1 HETATM 16 N N7 AMP . . . X 4 -29.246 55.151 -62.23 1 164 ? N7 AMP 2004 G 1 HETATM 17 C C5 AMP . . . X 4 -28.693 56.353 -61.986 1 164 ? C5 AMP 2004 G 1 HETATM 18 C C6 AMP . . . X 4 -27.381 56.996 -62.234 1 164 ? C6 AMP 2004 G 1 HETATM 19 N N6 AMP . . . X 4 -26.382 56.328 -62.859 1 164 ? N6 AMP 2004 G 1 HETATM 20 N N1 AMP . . . X 4 -27.216 58.271 -61.817 1 164 ? N1 AMP 2004 G 1 HETATM 21 C C2 AMP . . . X 4 -28.201 58.945 -61.196 1 164 ? C2 AMP 2004 G 1 HETATM 22 N N3 AMP . . . X 4 -29.414 58.425 -60.938 1 164 ? N3 AMP 2004 G 1 HETATM 23 C C4 AMP . . . X 4 -29.718 57.156 -61.301 1 164 ? C4 AMP 2004 G 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 111 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #