data_3BNI # _model_server_result.job_id vrS4ERBUPcxc-BdWsp-TDQ _model_server_result.datetime_utc '2024-11-04 22:57:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bni # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 3BNI # _exptl.entry_id 3BNI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BNI _cell.length_a 46.091 _cell.length_b 66.354 _cell.length_c 125.083 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BNI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 237 n n O1 HO1 PG4 sing 238 n n C1 C2 PG4 sing 239 n n C1 H11 PG4 sing 240 n n C1 H12 PG4 sing 241 n n C2 O2 PG4 sing 242 n n C2 H21 PG4 sing 243 n n C2 H22 PG4 sing 244 n n O2 C3 PG4 sing 245 n n C3 C4 PG4 sing 246 n n C3 H31 PG4 sing 247 n n C3 H32 PG4 sing 248 n n C4 O3 PG4 sing 249 n n C4 H41 PG4 sing 250 n n C4 H42 PG4 sing 251 n n O3 C5 PG4 sing 252 n n C5 C6 PG4 sing 253 n n C5 H51 PG4 sing 254 n n C5 H52 PG4 sing 255 n n C6 O4 PG4 sing 256 n n C6 H61 PG4 sing 257 n n C6 H62 PG4 sing 258 n n O4 C7 PG4 sing 259 n n C7 C8 PG4 sing 260 n n C7 H71 PG4 sing 261 n n C7 H72 PG4 sing 262 n n C8 O5 PG4 sing 263 n n C8 H81 PG4 sing 264 n n C8 H82 PG4 sing 265 n n O5 HO5 PG4 sing 266 n n # _atom_sites.entry_id 3BNI _atom_sites.fract_transf_matrix[1][1] 0.021696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015071 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007995 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PG4 A 1 301 301 PG4 PG4 . D 2 PG4 B 1 302 302 PG4 PG4 . E 3 HOH A 1 302 1 HOH HOH . E 3 HOH A 2 303 4 HOH HOH . E 3 HOH A 3 304 7 HOH HOH . E 3 HOH A 4 305 8 HOH HOH . E 3 HOH A 5 306 9 HOH HOH . E 3 HOH A 6 307 13 HOH HOH . E 3 HOH A 7 308 14 HOH HOH . E 3 HOH A 8 309 15 HOH HOH . E 3 HOH A 9 310 17 HOH HOH . E 3 HOH A 10 311 19 HOH HOH . E 3 HOH A 11 312 21 HOH HOH . E 3 HOH A 12 313 22 HOH HOH . E 3 HOH A 13 314 23 HOH HOH . E 3 HOH A 14 315 24 HOH HOH . E 3 HOH A 15 316 29 HOH HOH . E 3 HOH A 16 317 31 HOH HOH . E 3 HOH A 17 318 33 HOH HOH . E 3 HOH A 18 319 35 HOH HOH . E 3 HOH A 19 320 40 HOH HOH . E 3 HOH A 20 321 42 HOH HOH . E 3 HOH A 21 322 43 HOH HOH . E 3 HOH A 22 323 45 HOH HOH . E 3 HOH A 23 324 47 HOH HOH . E 3 HOH A 24 325 48 HOH HOH . E 3 HOH A 25 326 49 HOH HOH . E 3 HOH A 26 327 59 HOH HOH . E 3 HOH A 27 328 60 HOH HOH . E 3 HOH A 28 329 66 HOH HOH . E 3 HOH A 29 330 67 HOH HOH . E 3 HOH A 30 331 69 HOH HOH . E 3 HOH A 31 332 70 HOH HOH . E 3 HOH A 32 333 72 HOH HOH . E 3 HOH A 33 334 75 HOH HOH . E 3 HOH A 34 335 41 HOH HOH . F 3 HOH B 1 303 2 HOH HOH . F 3 HOH B 2 304 3 HOH HOH . F 3 HOH B 3 305 5 HOH HOH . F 3 HOH B 4 306 6 HOH HOH . F 3 HOH B 5 307 10 HOH HOH . F 3 HOH B 6 308 11 HOH HOH . F 3 HOH B 7 309 12 HOH HOH . F 3 HOH B 8 310 16 HOH HOH . F 3 HOH B 9 311 18 HOH HOH . F 3 HOH B 10 312 20 HOH HOH . F 3 HOH B 11 313 25 HOH HOH . F 3 HOH B 12 314 26 HOH HOH . F 3 HOH B 13 315 27 HOH HOH . F 3 HOH B 14 316 28 HOH HOH . F 3 HOH B 15 317 30 HOH HOH . F 3 HOH B 16 318 32 HOH HOH . F 3 HOH B 17 319 34 HOH HOH . F 3 HOH B 18 320 36 HOH HOH . F 3 HOH B 19 321 37 HOH HOH . F 3 HOH B 20 322 38 HOH HOH . F 3 HOH B 21 323 39 HOH HOH . F 3 HOH B 22 325 44 HOH HOH . F 3 HOH B 23 326 46 HOH HOH . F 3 HOH B 24 327 50 HOH HOH . F 3 HOH B 25 328 51 HOH HOH . F 3 HOH B 26 329 52 HOH HOH . F 3 HOH B 27 330 53 HOH HOH . F 3 HOH B 28 331 54 HOH HOH . F 3 HOH B 29 332 55 HOH HOH . F 3 HOH B 30 333 56 HOH HOH . F 3 HOH B 31 334 57 HOH HOH . F 3 HOH B 32 335 58 HOH HOH . F 3 HOH B 33 336 61 HOH HOH . F 3 HOH B 34 337 62 HOH HOH . F 3 HOH B 35 338 63 HOH HOH . F 3 HOH B 36 339 64 HOH HOH . F 3 HOH B 37 340 65 HOH HOH . F 3 HOH B 38 341 68 HOH HOH . F 3 HOH B 39 342 71 HOH HOH . F 3 HOH B 40 343 73 HOH HOH . F 3 HOH B 41 344 74 HOH HOH . F 3 HOH B 42 345 76 HOH HOH . F 3 HOH B 43 346 77 HOH HOH . F 3 HOH B 44 347 78 HOH HOH . F 3 HOH B 45 348 79 HOH HOH . F 3 HOH B 46 349 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 2 18.049 27.159 19.721 1 50.3 ? O1 PG4 302 B 1 HETATM 2 C C1 PG4 . . . D 2 16.783 26.78 19.119 1 48.98 ? C1 PG4 302 B 1 HETATM 3 C C2 PG4 . . . D 2 15.72 26.602 20.21 1 46.83 ? C2 PG4 302 B 1 HETATM 4 O O2 PG4 . . . D 2 14.425 26.35 19.656 1 45.59 ? O2 PG4 302 B 1 HETATM 5 C C3 PG4 . . . D 2 13.363 27.017 20.368 1 43.11 ? C3 PG4 302 B 1 HETATM 6 C C4 PG4 . . . D 2 12.69 28.009 19.414 1 42.75 ? C4 PG4 302 B 1 HETATM 7 O O3 PG4 . . . D 2 11.277 27.803 19.231 1 44.68 ? O3 PG4 302 B 1 HETATM 8 C C5 PG4 . . . D 2 10.876 28.001 17.858 1 41.36 ? C5 PG4 302 B 1 HETATM 9 C C6 PG4 . . . D 2 9.854 26.948 17.476 1 42.32 ? C6 PG4 302 B 1 HETATM 10 O O4 PG4 . . . D 2 9.556 27.103 16.094 1 46.24 ? O4 PG4 302 B 1 HETATM 11 C C7 PG4 . . . D 2 8.501 26.257 15.631 1 46.25 ? C7 PG4 302 B 1 HETATM 12 C C8 PG4 . . . D 2 8.359 26.49 14.137 1 48.46 ? C8 PG4 302 B 1 HETATM 13 O O5 PG4 . . . D 2 7.029 26.226 13.672 1 48.82 ? O5 PG4 302 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #