data_3BPM # _model_server_result.job_id 07JFwZMTVzaXL-4ZA3iaMg _model_server_result.datetime_utc '2024-11-07 18:58:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bpm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":302}' # _entry.id 3BPM # _exptl.entry_id 3BPM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BPM _cell.length_a 154.57 _cell.length_b 154.57 _cell.length_c 129.011 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BPM _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,J,L 1 1 B,D,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 41 A CYS 48 1_555 A SG CYS 82 A CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? disulf ? disulf2 A SG CYS 75 A CYS 82 1_555 A SG CYS 116 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf3 A SG CYS 101 A CYS 108 1_555 A SG CYS 121 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf4 A SG CYS 170 A CYS 177 1_555 A SG CYS 231 A CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? disulf ? disulf5 B SG CYS 41 B CYS 48 1_555 B SG CYS 82 B CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 75 B CYS 82 1_555 B SG CYS 116 B CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf7 B SG CYS 101 B CYS 108 1_555 B SG CYS 121 B CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf8 B SG CYS 170 B CYS 177 1_555 B SG CYS 231 B CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? covale ? covale1 A SG CYS 44 A CYS 51 1_555 C C AR7 4 D AR7 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.797 ? covale ? covale2 B SG CYS 44 B CYS 51 1_555 D C AR7 4 C AR7 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? covale ? covale3 C C ACE 1 D ACE 1 1_555 C N LEU 2 D LEU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 sing covale ? covale4 C C LEU 3 D LEU 3 1_555 C N AR7 4 D AR7 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 sing covale ? covale5 D C ACE 1 C ACE 1 1_555 D N LEU 2 C LEU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.361 sing covale ? covale6 D C LEU 3 C LEU 3 1_555 D N AR7 4 C AR7 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 sing # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 324 n n S O2 SO4 doub 325 n n S O3 SO4 sing 326 n n S O4 SO4 sing 327 n n # _atom_sites.entry_id 3BPM _atom_sites.fract_transf_matrix[1][1] 0.00647 _atom_sites.fract_transf_matrix[1][2] 0.003735 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00747 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007751 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 301 251 SO4 SO4 . F 3 SO4 A 1 302 252 SO4 SO4 . G 3 SO4 A 1 303 253 SO4 SO4 . H 3 SO4 B 1 301 251 SO4 SO4 . I 3 SO4 B 1 302 252 SO4 SO4 . J 4 HOH A 1 401 301 HOH HOH . J 4 HOH A 2 402 302 HOH HOH . J 4 HOH A 3 403 303 HOH HOH . J 4 HOH A 4 404 304 HOH HOH . J 4 HOH A 5 405 305 HOH HOH . J 4 HOH A 6 406 306 HOH HOH . J 4 HOH A 7 407 307 HOH HOH . J 4 HOH A 8 408 308 HOH HOH . J 4 HOH A 9 409 309 HOH HOH . J 4 HOH A 10 410 310 HOH HOH . J 4 HOH A 11 411 312 HOH HOH . J 4 HOH A 12 412 313 HOH HOH . J 4 HOH A 13 413 314 HOH HOH . J 4 HOH A 14 414 315 HOH HOH . J 4 HOH A 15 415 316 HOH HOH . J 4 HOH A 16 416 317 HOH HOH . J 4 HOH A 17 417 318 HOH HOH . J 4 HOH A 18 418 319 HOH HOH . J 4 HOH A 19 419 320 HOH HOH . J 4 HOH A 20 420 321 HOH HOH . J 4 HOH A 21 421 322 HOH HOH . J 4 HOH A 22 422 323 HOH HOH . J 4 HOH A 23 423 324 HOH HOH . J 4 HOH A 24 424 325 HOH HOH . J 4 HOH A 25 425 326 HOH HOH . J 4 HOH A 26 426 327 HOH HOH . J 4 HOH A 27 427 328 HOH HOH . J 4 HOH A 28 428 329 HOH HOH . J 4 HOH A 29 429 330 HOH HOH . J 4 HOH A 30 430 332 HOH HOH . J 4 HOH A 31 431 333 HOH HOH . J 4 HOH A 32 432 334 HOH HOH . J 4 HOH A 33 433 335 HOH HOH . J 4 HOH A 34 434 336 HOH HOH . J 4 HOH A 35 435 337 HOH HOH . J 4 HOH A 36 436 338 HOH HOH . J 4 HOH A 37 437 339 HOH HOH . J 4 HOH A 38 438 340 HOH HOH . J 4 HOH A 39 439 341 HOH HOH . J 4 HOH A 40 440 342 HOH HOH . J 4 HOH A 41 441 343 HOH HOH . J 4 HOH A 42 442 346 HOH HOH . J 4 HOH A 43 443 347 HOH HOH . J 4 HOH A 44 444 348 HOH HOH . J 4 HOH A 45 445 349 HOH HOH . J 4 HOH A 46 446 350 HOH HOH . J 4 HOH A 47 447 351 HOH HOH . J 4 HOH A 48 448 352 HOH HOH . J 4 HOH A 49 449 353 HOH HOH . J 4 HOH A 50 450 354 HOH HOH . J 4 HOH A 51 451 355 HOH HOH . K 4 HOH B 1 401 302 HOH HOH . K 4 HOH B 2 402 303 HOH HOH . K 4 HOH B 3 403 304 HOH HOH . K 4 HOH B 4 404 305 HOH HOH . K 4 HOH B 5 405 306 HOH HOH . K 4 HOH B 6 406 307 HOH HOH . K 4 HOH B 7 407 308 HOH HOH . K 4 HOH B 8 408 309 HOH HOH . K 4 HOH B 9 409 310 HOH HOH . K 4 HOH B 10 410 311 HOH HOH . K 4 HOH B 11 411 312 HOH HOH . K 4 HOH B 12 412 313 HOH HOH . K 4 HOH B 13 413 314 HOH HOH . K 4 HOH B 14 414 315 HOH HOH . K 4 HOH B 15 415 316 HOH HOH . K 4 HOH B 16 416 317 HOH HOH . K 4 HOH B 17 417 318 HOH HOH . K 4 HOH B 18 418 319 HOH HOH . K 4 HOH B 19 419 320 HOH HOH . K 4 HOH B 20 420 321 HOH HOH . K 4 HOH B 21 421 322 HOH HOH . K 4 HOH B 22 422 323 HOH HOH . L 4 HOH D 1 101 311 HOH HOH . L 4 HOH D 2 102 331 HOH HOH . L 4 HOH D 3 103 356 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . I 3 -11.92 43.873 -39.474 1 72.86 ? S SO4 302 B 1 HETATM 2 O O1 SO4 . . . I 3 -10.751 44.136 -38.619 1 72.96 ? O1 SO4 302 B 1 HETATM 3 O O2 SO4 . . . I 3 -11.851 44.56 -40.762 1 72.03 ? O2 SO4 302 B 1 HETATM 4 O O3 SO4 . . . I 3 -12.048 42.442 -39.745 1 73.42 ? O3 SO4 302 B 1 HETATM 5 O O4 SO4 . . . I 3 -13.082 44.318 -38.718 1 73.88 ? O4 SO4 302 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #