data_3BQB # _model_server_result.job_id IBEMSnaXF132A10rKy-fsg _model_server_result.datetime_utc '2025-01-07 00:03:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bqb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":294}' # _entry.id 3BQB # _exptl.entry_id 3BQB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BQB _cell.length_a 157.092 _cell.length_b 157.092 _cell.length_c 131.921 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BQB _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS tetrameric 4 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L 1 1 A,B,E,F,I,J 2 1 C,D,G,H,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 143 A GLU 143 1_555 E MG MG . A MG 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc2 A OE1 GLU 145 A GLU 145 1_555 E MG MG . A MG 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc3 B OE1 GLU 145 X GLU 145 1_555 F MG MG . X MG 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc4 B OD2 ASP 164 X ASP 164 1_555 F MG MG . X MG 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc5 C OE2 GLU 143 Z GLU 143 1_555 G MG MG . Z MG 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc6 C OE1 GLU 145 Z GLU 145 1_555 G MG MG . Z MG 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc7 D OE2 GLU 143 Y GLU 143 1_555 H MG MG . Y MG 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc8 D OE1 GLU 145 Y GLU 145 1_555 H MG MG . Y MG 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3BQB _atom_sites.fract_transf_matrix[1][1] 0.006366 _atom_sites.fract_transf_matrix[1][2] 0.003675 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00735 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00758 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 294 1 MG MG . F 2 MG X 1 294 1 MG MG . G 2 MG Z 1 294 1 MG MG . H 2 MG Y 1 294 1 MG MG . I 3 HOH A 1 295 2 HOH HOH . I 3 HOH A 2 296 3 HOH HOH . I 3 HOH A 3 297 51 HOH HOH . I 3 HOH A 4 298 58 HOH HOH . I 3 HOH A 5 299 61 HOH HOH . I 3 HOH A 6 300 68 HOH HOH . I 3 HOH A 7 301 75 HOH HOH . I 3 HOH A 8 302 84 HOH HOH . I 3 HOH A 9 303 96 HOH HOH . I 3 HOH A 10 304 104 HOH HOH . I 3 HOH A 11 305 131 HOH HOH . I 3 HOH A 12 306 152 HOH HOH . I 3 HOH A 13 307 161 HOH HOH . I 3 HOH A 14 308 166 HOH HOH . J 3 HOH X 1 295 1 HOH HOH . J 3 HOH X 2 296 4 HOH HOH . J 3 HOH X 3 297 5 HOH HOH . J 3 HOH X 4 298 8 HOH HOH . J 3 HOH X 5 299 11 HOH HOH . J 3 HOH X 6 300 21 HOH HOH . J 3 HOH X 7 301 22 HOH HOH . J 3 HOH X 8 302 28 HOH HOH . J 3 HOH X 9 303 31 HOH HOH . J 3 HOH X 10 304 36 HOH HOH . J 3 HOH X 11 305 65 HOH HOH . J 3 HOH X 12 306 91 HOH HOH . J 3 HOH X 13 307 92 HOH HOH . J 3 HOH X 14 308 109 HOH HOH . J 3 HOH X 15 309 115 HOH HOH . J 3 HOH X 16 310 154 HOH HOH . J 3 HOH X 17 311 157 HOH HOH . J 3 HOH X 18 312 160 HOH HOH . J 3 HOH X 19 313 165 HOH HOH . K 3 HOH Z 1 295 34 HOH HOH . K 3 HOH Z 2 296 37 HOH HOH . K 3 HOH Z 3 297 79 HOH HOH . K 3 HOH Z 4 298 101 HOH HOH . K 3 HOH Z 5 299 114 HOH HOH . K 3 HOH Z 6 300 149 HOH HOH . K 3 HOH Z 7 301 175 HOH HOH . L 3 HOH Y 1 295 6 HOH HOH . L 3 HOH Y 2 296 9 HOH HOH . L 3 HOH Y 3 297 12 HOH HOH . L 3 HOH Y 4 298 14 HOH HOH . L 3 HOH Y 5 299 24 HOH HOH . L 3 HOH Y 6 300 40 HOH HOH . L 3 HOH Y 7 301 42 HOH HOH . L 3 HOH Y 8 302 46 HOH HOH . L 3 HOH Y 9 303 48 HOH HOH . L 3 HOH Y 10 304 88 HOH HOH . L 3 HOH Y 11 305 90 HOH HOH . L 3 HOH Y 12 306 99 HOH HOH . L 3 HOH Y 13 307 106 HOH HOH . L 3 HOH Y 14 308 116 HOH HOH . L 3 HOH Y 15 309 123 HOH HOH . L 3 HOH Y 16 310 153 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 13.756 _atom_site.Cartn_y -45.4 _atom_site.Cartn_z 25.813 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 88.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 294 _atom_site.auth_asym_id Z _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #